RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 PLEKHD1A6NEE1 506 aa15.34■□□□□ 0.05
LINC00566-201ENST00000561557 HECW1Q76N89 1606 aa15.33■□□□□ 0.04
LINC00566-201ENST00000561557 ARID3CA6NKF2 412 aa15.33■□□□□ 0.04
LINC00566-201ENST00000561557 EVX2Q03828 476 aa15.33■□□□□ 0.04
LINC00566-201ENST00000561557 CASKIN1Q8WXD9 1431 aa15.33■□□□□ 0.04
LINC00566-201ENST00000561557 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
LINC00566-201ENST00000561557 ATP1B4Q9UN42 357 aaPredicted RBP15.32■□□□□ 0.04
LINC00566-201ENST00000561557 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
LINC00566-201ENST00000561557 KCNH8Q96L42 1107 aa15.3■□□□□ 0.04
LINC00566-201ENST00000561557 FYCO1Q9BQS8 1478 aa15.28■□□□□ 0.04
LINC00566-201ENST00000561557 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
LINC00566-201ENST00000561557 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.03
LINC00566-201ENST00000561557 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
LINC00566-201ENST00000561557 CDK13Q14004 1512 aaKnown RBP15.25■□□□□ 0.03
LINC00566-201ENST00000561557 PCF11O94913 1555 aaKnown RBP15.24■□□□□ 0.03
LINC00566-201ENST00000561557 CD109Q6YHK3 1445 aa15.24■□□□□ 0.03
LINC00566-201ENST00000561557 MAP3K4Q9Y6R4 1608 aa15.24■□□□□ 0.03
LINC00566-201ENST00000561557 CFAP43Q8NDM7 1665 aa15.23■□□□□ 0.03
LINC00566-201ENST00000561557 TEX14Q8IWB6 1497 aa15.23■□□□□ 0.03
LINC00566-201ENST00000561557 MAGI3Q5TCQ9 1506 aa15.22■□□□□ 0.03
LINC00566-201ENST00000561557 TSPOAP1O95153 1857 aa15.21■□□□□ 0.03
LINC00566-201ENST00000561557 VPS8Q8N3P4 1428 aa15.21■□□□□ 0.03
LINC00566-201ENST00000561557 ABCA9Q8IUA7 1624 aa15.21■□□□□ 0.02
LINC00566-201ENST00000561557 TROQ12816 1431 aaPredicted RBP15.2■□□□□ 0.02
LINC00566-201ENST00000561557 LRRIQ1Q96JM4 1722 aa15.18■□□□□ 0.02
LINC00566-201ENST00000561557 PHLDB1Q86UU1 1377 aa15.18■□□□□ 0.02
LINC00566-201ENST00000561557 PPRC1Q5VV67 1664 aaKnown RBP15.18■□□□□ 0.02
LINC00566-201ENST00000561557 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
LINC00566-201ENST00000561557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC00566-201ENST00000561557 KIF14Q15058 1648 aa15.13■□□□□ 0.01
LINC00566-201ENST00000561557 NEO1Q92859 1461 aa15.12■□□□□ 0.01
LINC00566-201ENST00000561557 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
LINC00566-201ENST00000561557 PLCH2O75038 1416 aa15.11■□□□□ 0.01
LINC00566-201ENST00000561557 KDM6BO15054 1643 aa15.11■□□□□ 0.01
LINC00566-201ENST00000561557 LHX8Q68G74 356 aa15.11■□□□□ 0.01
LINC00566-201ENST00000561557 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
LINC00566-201ENST00000561557 ARAP3Q8WWN8 1544 aa15.09■□□□□ 0.01
LINC00566-201ENST00000561557 TTC37Q6PGP7 1564 aa15.08■□□□□ 0
LINC00566-201ENST00000561557 EFCAB2Q5VUJ9 269 aa15.08■□□□□ 0
LINC00566-201ENST00000561557 EHBP1L1Q8N3D4 1523 aa15.07■□□□□ 0
LINC00566-201ENST00000561557 TIAM1Q13009 1591 aa15.07■□□□□ 0
LINC00566-201ENST00000561557 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
LINC00566-201ENST00000561557 AKNAQ7Z591 1439 aa15.06■□□□□ 0
LINC00566-201ENST00000561557 FANCAO15360 1455 aa15.06■□□□□ 0
LINC00566-201ENST00000561557 COL17A1Q9UMD9 1497 aaPredicted RBP15.05■□□□□ -0
LINC00566-201ENST00000561557 MYO5CQ9NQX4 1742 aa15.05■□□□□ -0
LINC00566-201ENST00000561557 LRRC9Q6ZRR7 1453 aa15.02■□□□□ -0
LINC00566-201ENST00000561557 CCNB3Q8WWL7 1395 aa15.02■□□□□ -0
LINC00566-201ENST00000561557 ATF5Q9Y2D1 282 aaPredicted RBP15.02■□□□□ -0
LINC00566-201ENST00000561557 ARHGAP5Q13017 1502 aa15□□□□□ -0.01
LINC00566-201ENST00000561557 GPATCH8Q9UKJ3 1502 aaKnown RBP15□□□□□ -0.01
LINC00566-201ENST00000561557 DENND4BO75064 1496 aaPredicted RBP15□□□□□ -0.01
LINC00566-201ENST00000561557 SUPT6HQ7KZ85 1726 aaKnown RBP14.99□□□□□ -0.01
LINC00566-201ENST00000561557 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
LINC00566-201ENST00000561557 CDC42BPBQ9Y5S2 1711 aa14.98□□□□□ -0.01
LINC00566-201ENST00000561557 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
LINC00566-201ENST00000561557 KANK4Q5T7N3 995 aaPredicted RBP14.98□□□□□ -0.01
LINC00566-201ENST00000561557 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
LINC00566-201ENST00000561557 SCAPERQ9BY12 1400 aa14.98□□□□□ -0.01
LINC00566-201ENST00000561557 CDC42BPAQ5VT25 1732 aa14.97□□□□□ -0.01
LINC00566-201ENST00000561557 RAPGEF3O95398 923 aa14.97□□□□□ -0.01
LINC00566-201ENST00000561557 PLSCR2Q9NRY7 297 aa14.97□□□□□ -0.01
LINC00566-201ENST00000561557 NCOA2Q15596 1464 aa14.96□□□□□ -0.01
LINC00566-201ENST00000561557 PLEKHH2Q8IVE3 1493 aa14.94□□□□□ -0.02
LINC00566-201ENST00000561557 ITSN2Q9NZM3 1697 aa14.93□□□□□ -0.02
LINC00566-201ENST00000561557 GABBR2O75899 941 aa14.93□□□□□ -0.02
LINC00566-201ENST00000561557 POGZQ7Z3K3 1410 aa14.92□□□□□ -0.02
LINC00566-201ENST00000561557 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
LINC00566-201ENST00000561557 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
LINC00566-201ENST00000561557 ZNF777Q9ULD5 760 aaPredicted RBP14.92□□□□□ -0.02
LINC00566-201ENST00000561557 MAGI2Q86UL8 1455 aa14.92□□□□□ -0.02
LINC00566-201ENST00000561557 RICTORQ6R327 1708 aa14.92□□□□□ -0.02
LINC00566-201ENST00000561557 ZNF518AQ6AHZ1 1483 aa14.91□□□□□ -0.02
LINC00566-201ENST00000561557 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
LINC00566-201ENST00000561557 C19orf67A6NJJ6 358 aa14.9□□□□□ -0.02
LINC00566-201ENST00000561557 RSPH4AQ5TD94 716 aa14.9□□□□□ -0.02
LINC00566-201ENST00000561557 ABCC1P33527 1531 aa14.9□□□□□ -0.02
LINC00566-201ENST00000561557 ZMYM4Q5VZL5 1548 aa14.9□□□□□ -0.02
LINC00566-201ENST00000561557 MIA2Q96PC5 1412 aa14.89□□□□□ -0.03
LINC00566-201ENST00000561557 AFAP1Q8N556 730 aa14.88□□□□□ -0.03
LINC00566-201ENST00000561557 SAMD9LQ8IVG5 1584 aa14.88□□□□□ -0.03
LINC00566-201ENST00000561557 ARHGEF12Q9NZN5 1544 aa14.87□□□□□ -0.03
LINC00566-201ENST00000561557 MYOM3Q5VTT5 1437 aa14.87□□□□□ -0.03
LINC00566-201ENST00000561557 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
LINC00566-201ENST00000561557 KDM5CP41229 1560 aa14.85□□□□□ -0.03
LINC00566-201ENST00000561557 TRAPPC8Q9Y2L5 1435 aa14.85□□□□□ -0.03
LINC00566-201ENST00000561557 MLH3Q9UHC1 1453 aa14.85□□□□□ -0.03
LINC00566-201ENST00000561557 ZNF644Q9H582 1327 aaPredicted RBP14.84□□□□□ -0.03
LINC00566-201ENST00000561557 MBD5Q9P267 1494 aa14.83□□□□□ -0.03
LINC00566-201ENST00000561557 ZFYVE16Q7Z3T8 1539 aa14.83□□□□□ -0.04
LINC00566-201ENST00000561557 SYCP2Q9BX26 1530 aa14.83□□□□□ -0.04
LINC00566-201ENST00000561557 MYT1LQ9UL68 1186 aa14.83□□□□□ -0.04
LINC00566-201ENST00000561557 ARHGEF40Q8TER5 1519 aa14.82□□□□□ -0.04
LINC00566-201ENST00000561557 SPAG9O60271 1321 aaKnown RBP14.82□□□□□ -0.04
LINC00566-201ENST00000561557 CAMSAP2Q08AD1 1489 aa14.82□□□□□ -0.04
LINC00566-201ENST00000561557 ATP10AO60312 1499 aa14.81□□□□□ -0.04
LINC00566-201ENST00000561557 HECW2Q9P2P5 1572 aa14.81□□□□□ -0.04
LINC00566-201ENST00000561557 TSPY4P0CV99 314 aa14.8□□□□□ -0.04
LINC00566-201ENST00000561557 TSPY10P0CW01 314 aa14.8□□□□□ -0.04
LINC00566-201ENST00000561557 YEATS2Q9ULM3 1422 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms