RNA–Protein interactions for RNA: ENST00000561521.1

LINC00662-201, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-201ENST00000561521 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
LINC00662-201ENST00000561521 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
LINC00662-201ENST00000561521 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
LINC00662-201ENST00000561521 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
LINC00662-201ENST00000561521 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.27
LINC00662-201ENST00000561521 NCLP19338 710 aaKnown RBP13.33□□□□□ -0.28
LINC00662-201ENST00000561521 FBLN2P98095 1184 aa13.33□□□□□ -0.28
LINC00662-201ENST00000561521 CLCN1P35523 988 aa13.32□□□□□ -0.28
LINC00662-201ENST00000561521 ADAMTS12P58397 1594 aa13.32□□□□□ -0.28
LINC00662-201ENST00000561521 IPO4Q8TEX9 1081 aaKnown RBP13.32□□□□□ -0.28
LINC00662-201ENST00000561521 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
LINC00662-201ENST00000561521 ANP32CO43423 234 aa13.31□□□□□ -0.28
LINC00662-201ENST00000561521 DDRGK1Q96HY6 314 aa13.31□□□□□ -0.28
LINC00662-201ENST00000561521 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
LINC00662-201ENST00000561521 TRIM52Q96A61 297 aa13.3□□□□□ -0.28
LINC00662-201ENST00000561521 TPM2P07951 284 aa13.3□□□□□ -0.28
LINC00662-201ENST00000561521 C14orf37Q86TY3 774 aa13.3□□□□□ -0.28
LINC00662-201ENST00000561521 NAP1L2Q9ULW6 460 aaPredicted RBP13.28□□□□□ -0.28
LINC00662-201ENST00000561521 PNNQ9H307 717 aaKnown RBP13.28□□□□□ -0.28
LINC00662-201ENST00000561521 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
LINC00662-201ENST00000561521 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
LINC00662-201ENST00000561521 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.29
LINC00662-201ENST00000561521 TMEM132AQ24JP5 1023 aa13.27□□□□□ -0.29
LINC00662-201ENST00000561521 L1TD1Q5T7N2 865 aaKnown RBP13.25□□□□□ -0.29
LINC00662-201ENST00000561521 GRIN2AQ12879 1464 aa13.25□□□□□ -0.29
LINC00662-201ENST00000561521 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
LINC00662-201ENST00000561521 CHMP7Q8WUX9 453 aaPredicted RBP13.24□□□□□ -0.29
LINC00662-201ENST00000561521 NAP1L5Q96NT1 182 aaPredicted RBP13.24□□□□□ -0.29
LINC00662-201ENST00000561521 MAP7D2Q96T17 732 aa13.24□□□□□ -0.29
LINC00662-201ENST00000561521 NFKBIBQ15653 356 aa13.24□□□□□ -0.29
LINC00662-201ENST00000561521 NUP160Q12769 1436 aa13.24□□□□□ -0.29
LINC00662-201ENST00000561521 BRD2P25440 801 aaKnown RBP13.23□□□□□ -0.29
LINC00662-201ENST00000561521 B4GALNT3Q6L9W6 998 aa13.23□□□□□ -0.29
LINC00662-201ENST00000561521 SMAP1Q8IYB5 467 aaPredicted RBP13.23□□□□□ -0.29
LINC00662-201ENST00000561521 MS4A1P11836 297 aa13.23□□□□□ -0.29
LINC00662-201ENST00000561521 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
LINC00662-201ENST00000561521 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
LINC00662-201ENST00000561521 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
LINC00662-201ENST00000561521 GTF2E1P29083 439 aaPredicted RBP13.22□□□□□ -0.29
LINC00662-201ENST00000561521 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
LINC00662-201ENST00000561521 DCAF11Q8TEB1 546 aa13.21□□□□□ -0.29
LINC00662-201ENST00000561521 BBXQ8WY36 941 aaPredicted RBP13.21□□□□□ -0.29
LINC00662-201ENST00000561521 CUL7Q14999 1698 aa13.21□□□□□ -0.3
LINC00662-201ENST00000561521 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
LINC00662-201ENST00000561521 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
LINC00662-201ENST00000561521 UTP14CQ5TAP6 766 aaKnown RBP13.19□□□□□ -0.3
LINC00662-201ENST00000561521 SHROOM2Q13796 1616 aa13.19□□□□□ -0.3
LINC00662-201ENST00000561521 CEP170Q5SW79 1584 aa13.19□□□□□ -0.3
LINC00662-201ENST00000561521 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
LINC00662-201ENST00000561521 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
LINC00662-201ENST00000561521 IRX6P78412 446 aaPredicted RBP13.18□□□□□ -0.3
LINC00662-201ENST00000561521 DDX10Q13206 875 aaKnown RBP13.18□□□□□ -0.3
LINC00662-201ENST00000561521 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
LINC00662-201ENST00000561521 STAC3Q96MF2 364 aa13.18□□□□□ -0.3
LINC00662-201ENST00000561521 TERF1P54274 439 aa13.16□□□□□ -0.3
LINC00662-201ENST00000561521 HNRNPUQ00839 825 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00662-201ENST00000561521 ZBED9Q6R2W3 1325 aa13.15□□□□□ -0.3
LINC00662-201ENST00000561521 GOLGA3Q08378 1498 aa13.15□□□□□ -0.3
LINC00662-201ENST00000561521 RGS3P49796 1198 aa13.15□□□□□ -0.3
LINC00662-201ENST00000561521 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.31
LINC00662-201ENST00000561521 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
LINC00662-201ENST00000561521 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
LINC00662-201ENST00000561521 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
LINC00662-201ENST00000561521 IGF1RP08069 1367 aa13.13□□□□□ -0.31
LINC00662-201ENST00000561521 MAPKBP1O60336 1514 aa13.12□□□□□ -0.31
LINC00662-201ENST00000561521 BACH2Q9BYV9 841 aa13.12□□□□□ -0.31
LINC00662-201ENST00000561521 RUSC2Q8N2Y8 1516 aa13.12□□□□□ -0.31
LINC00662-201ENST00000561521 MTERF4Q7Z6M4 381 aaKnown RBP13.12□□□□□ -0.31
LINC00662-201ENST00000561521 TEX2Q8IWB9 1127 aa13.1□□□□□ -0.31
LINC00662-201ENST00000561521 RRBP1Q9P2E9 1410 aaKnown RBP13.09□□□□□ -0.31
LINC00662-201ENST00000561521 FTSJ3Q8IY81 847 aaKnown RBP13.08□□□□□ -0.31
LINC00662-201ENST00000561521 PDE4AP27815 886 aa13.08□□□□□ -0.32
LINC00662-201ENST00000561521 PAXIP1Q6ZW49 1069 aaPredicted RBP13.08□□□□□ -0.32
LINC00662-201ENST00000561521 KIAA0586Q9BVV6 1533 aa13.06□□□□□ -0.32
LINC00662-201ENST00000561521 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
LINC00662-201ENST00000561521 KIF21BO75037 1637 aa13.05□□□□□ -0.32
LINC00662-201ENST00000561521 TAF3Q5VWG9 929 aa13.04□□□□□ -0.32
LINC00662-201ENST00000561521 CYB5RLQ6IPT4 315 aa13.04□□□□□ -0.32
LINC00662-201ENST00000561521 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC00662-201ENST00000561521 ERCC6L2Q5T890 1561 aa13.04□□□□□ -0.32
LINC00662-201ENST00000561521 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
LINC00662-201ENST00000561521 CLIP1P30622 1438 aa13.04□□□□□ -0.32
LINC00662-201ENST00000561521 DMTNQ08495 405 aa13.03□□□□□ -0.32
LINC00662-201ENST00000561521 KIF20AO95235 890 aa13.02□□□□□ -0.33
LINC00662-201ENST00000561521 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
LINC00662-201ENST00000561521 FSD2A1L4K1 749 aa13□□□□□ -0.33
LINC00662-201ENST00000561521 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
LINC00662-201ENST00000561521 PRG4Q92954 1404 aaPredicted RBP12.99□□□□□ -0.33
LINC00662-201ENST00000561521 TMEM51Q9NW97 253 aa12.99□□□□□ -0.33
LINC00662-201ENST00000561521 RAPGEF2Q9Y4G8 1499 aa12.99□□□□□ -0.33
LINC00662-201ENST00000561521 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
LINC00662-201ENST00000561521 NCOA2Q15596 1464 aa12.97□□□□□ -0.33
LINC00662-201ENST00000561521 GTPBP4Q9BZE4 634 aaKnown RBP12.97□□□□□ -0.33
LINC00662-201ENST00000561521 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.33
LINC00662-201ENST00000561521 IQGAP2Q13576 1575 aa12.96□□□□□ -0.33
LINC00662-201ENST00000561521 ANP32BQ92688 251 aaKnown RBP12.96□□□□□ -0.33
LINC00662-201ENST00000561521 CHMP4AQ9BY43 222 aa12.96□□□□□ -0.34
LINC00662-201ENST00000561521 ESPNB1AK53 854 aa12.95□□□□□ -0.34
LINC00662-201ENST00000561521 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
LINC00662-201ENST00000561521 ZFP91Q96JP5 570 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms