RNA–Protein interactions for RNA: ENST00000561449.1

TCF12-226, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-226ENST00000561449 CFAP43Q8NDM7 1665 aa12.5□□□□□ -0.41
TCF12-226ENST00000561449 LRRIQ1Q96JM4 1722 aa12.5□□□□□ -0.41
TCF12-226ENST00000561449 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
TCF12-226ENST00000561449 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
TCF12-226ENST00000561449 CD109Q6YHK3 1445 aa12.48□□□□□ -0.41
TCF12-226ENST00000561449 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
TCF12-226ENST00000561449 TEX14Q8IWB6 1497 aa12.47□□□□□ -0.41
TCF12-226ENST00000561449 APLP2Q06481 763 aa12.47□□□□□ -0.41
TCF12-226ENST00000561449 TSPOAP1O95153 1857 aa12.46□□□□□ -0.41
TCF12-226ENST00000561449 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
TCF12-226ENST00000561449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.44□□□□□ -0.42
TCF12-226ENST00000561449 ABCB7O75027 752 aa12.44□□□□□ -0.42
TCF12-226ENST00000561449 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
TCF12-226ENST00000561449 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
TCF12-226ENST00000561449 MAP3K1Q13233 1512 aa12.43□□□□□ -0.42
TCF12-226ENST00000561449 KIF14Q15058 1648 aa12.43□□□□□ -0.42
TCF12-226ENST00000561449 MTUS2Q5JR59 1369 aa12.42□□□□□ -0.42
TCF12-226ENST00000561449 TIAM1Q13009 1591 aa12.4□□□□□ -0.42
TCF12-226ENST00000561449 ARAP3Q8WWN8 1544 aa12.4□□□□□ -0.42
TCF12-226ENST00000561449 NEO1Q92859 1461 aa12.4□□□□□ -0.43
TCF12-226ENST00000561449 TTC37Q6PGP7 1564 aa12.39□□□□□ -0.43
TCF12-226ENST00000561449 PLCH2O75038 1416 aa12.39□□□□□ -0.43
TCF12-226ENST00000561449 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
TCF12-226ENST00000561449 KDM6BO15054 1643 aa12.37□□□□□ -0.43
TCF12-226ENST00000561449 MYO5CQ9NQX4 1742 aa12.37□□□□□ -0.43
TCF12-226ENST00000561449 CFAP74Q9C0B2 1584 aa12.36□□□□□ -0.43
TCF12-226ENST00000561449 FANCAO15360 1455 aa12.36□□□□□ -0.43
TCF12-226ENST00000561449 LRRC9Q6ZRR7 1453 aa12.36□□□□□ -0.43
TCF12-226ENST00000561449 EFCAB2Q5VUJ9 269 aa12.36□□□□□ -0.43
TCF12-226ENST00000561449 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
TCF12-226ENST00000561449 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
TCF12-226ENST00000561449 AKNAQ7Z591 1439 aa12.33□□□□□ -0.44
TCF12-226ENST00000561449 PREX2Q70Z35 1606 aa12.33□□□□□ -0.44
TCF12-226ENST00000561449 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
TCF12-226ENST00000561449 CCNB3Q8WWL7 1395 aa12.32□□□□□ -0.44
TCF12-226ENST00000561449 SUPT6HQ7KZ85 1726 aaKnown RBP12.32□□□□□ -0.44
TCF12-226ENST00000561449 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
TCF12-226ENST00000561449 CDC42BPAQ5VT25 1732 aa12.31□□□□□ -0.44
TCF12-226ENST00000561449 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
TCF12-226ENST00000561449 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
TCF12-226ENST00000561449 NCOA2Q15596 1464 aa12.31□□□□□ -0.44
TCF12-226ENST00000561449 DENND4BO75064 1496 aaPredicted RBP12.29□□□□□ -0.44
TCF12-226ENST00000561449 ADGRL1O94910 1474 aa12.29□□□□□ -0.44
TCF12-226ENST00000561449 CFDP1Q9UEE9 299 aaPredicted RBP12.29□□□□□ -0.44
TCF12-226ENST00000561449 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
TCF12-226ENST00000561449 SCAPERQ9BY12 1400 aa12.28□□□□□ -0.44
TCF12-226ENST00000561449 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.45
TCF12-226ENST00000561449 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
TCF12-226ENST00000561449 KIAA1107Q9UPP5 1409 aa12.26□□□□□ -0.45
TCF12-226ENST00000561449 POGZQ7Z3K3 1410 aa12.25□□□□□ -0.45
TCF12-226ENST00000561449 RICTORQ6R327 1708 aa12.25□□□□□ -0.45
TCF12-226ENST00000561449 ABCC1P33527 1531 aa12.24□□□□□ -0.45
TCF12-226ENST00000561449 ZNF518AQ6AHZ1 1483 aa12.24□□□□□ -0.45
TCF12-226ENST00000561449 MIA2Q96PC5 1412 aa12.24□□□□□ -0.45
TCF12-226ENST00000561449 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
TCF12-226ENST00000561449 FRMPD1Q5SYB0 1578 aa12.23□□□□□ -0.45
TCF12-226ENST00000561449 SAMD9LQ8IVG5 1584 aa12.23□□□□□ -0.45
TCF12-226ENST00000561449 ZMYM4Q5VZL5 1548 aa12.23□□□□□ -0.45
TCF12-226ENST00000561449 MAGI2Q86UL8 1455 aa12.23□□□□□ -0.45
TCF12-226ENST00000561449 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
TCF12-226ENST00000561449 RSPH4AQ5TD94 716 aa12.22□□□□□ -0.45
TCF12-226ENST00000561449 KDM5CP41229 1560 aa12.21□□□□□ -0.46
TCF12-226ENST00000561449 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.46
TCF12-226ENST00000561449 AFAP1Q8N556 730 aa12.2□□□□□ -0.46
TCF12-226ENST00000561449 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
TCF12-226ENST00000561449 ZNF644Q9H582 1327 aaPredicted RBP12.19□□□□□ -0.46
TCF12-226ENST00000561449 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
TCF12-226ENST00000561449 MLH3Q9UHC1 1453 aa12.19□□□□□ -0.46
TCF12-226ENST00000561449 HNRNPMP52272 730 aaKnown RBP eCLIP12.18□□□□□ -0.46
TCF12-226ENST00000561449 CAMSAP2Q08AD1 1489 aa12.18□□□□□ -0.46
TCF12-226ENST00000561449 MBD5Q9P267 1494 aa12.18□□□□□ -0.46
TCF12-226ENST00000561449 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
TCF12-226ENST00000561449 ARHGEF40Q8TER5 1519 aa12.16□□□□□ -0.46
TCF12-226ENST00000561449 FGD6Q6ZV73 1430 aa12.16□□□□□ -0.46
TCF12-226ENST00000561449 ARHGEF5Q12774 1597 aa12.16□□□□□ -0.46
TCF12-226ENST00000561449 HECW2Q9P2P5 1572 aa12.16□□□□□ -0.46
TCF12-226ENST00000561449 SPAG9O60271 1321 aaKnown RBP12.15□□□□□ -0.46
TCF12-226ENST00000561449 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
TCF12-226ENST00000561449 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
TCF12-226ENST00000561449 RTEL1-TNFRSF6BF6WH68 1400 aa12.14□□□□□ -0.47
TCF12-226ENST00000561449 YEATS2Q9ULM3 1422 aa12.14□□□□□ -0.47
TCF12-226ENST00000561449 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
TCF12-226ENST00000561449 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
TCF12-226ENST00000561449 ATP10AO60312 1499 aa12.14□□□□□ -0.47
TCF12-226ENST00000561449 PTPN23Q9H3S7 1636 aa12.13□□□□□ -0.47
TCF12-226ENST00000561449 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
TCF12-226ENST00000561449 TSPY4P0CV99 314 aa12.12□□□□□ -0.47
TCF12-226ENST00000561449 TSPY10P0CW01 314 aa12.12□□□□□ -0.47
TCF12-226ENST00000561449 KIDINS220Q9ULH0 1771 aa12.12□□□□□ -0.47
TCF12-226ENST00000561449 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
TCF12-226ENST00000561449 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
TCF12-226ENST00000561449 REREQ9P2R6 1566 aa12.11□□□□□ -0.47
TCF12-226ENST00000561449 INO80Q9ULG1 1556 aaPredicted RBP12.11□□□□□ -0.47
TCF12-226ENST00000561449 DIP2CQ9Y2E4 1556 aa12.1□□□□□ -0.47
TCF12-226ENST00000561449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.09□□□□□ -0.47
TCF12-226ENST00000561449 POLA2Q14181 598 aa12.09□□□□□ -0.47
TCF12-226ENST00000561449 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
TCF12-226ENST00000561449 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
TCF12-226ENST00000561449 MAST1Q9Y2H9 1570 aa12.08□□□□□ -0.48
TCF12-226ENST00000561449 ARID4BQ4LE39 1312 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms