RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	APLP2	Q06481	763 aa		40.58	■■■■■ 4.09
TCF12-222	ENST00000561152	DENND4B	O75064	1496 aa	Predicted RBP	40.58	■■■■■ 4.09
TCF12-222	ENST00000561152	ADGRL1	O94910	1474 aa		40.58	■■■■■ 4.09
TCF12-222	ENST00000561152	SUPT6H	Q7KZ85	1726 aa	Known RBP	40.54	■■■■■ 4.08
TCF12-222	ENST00000561152	CCNB3	Q8WWL7	1395 aa		40.54	■■■■■ 4.08
TCF12-222	ENST00000561152	LRRC9	Q6ZRR7	1453 aa		40.53	■■■■■ 4.08
TCF12-222	ENST00000561152	RAPGEF3	O95398	923 aa		40.52	■■■■■ 4.08
TCF12-222	ENST00000561152	GPATCH8	Q9UKJ3	1502 aa	Known RBP	40.51	■■■■■ 4.08
TCF12-222	ENST00000561152	SCAPER	Q9BY12	1400 aa		40.5	■■■■■ 4.07
TCF12-222	ENST00000561152	RICTOR	Q6R327	1708 aa		40.49	■■■■■ 4.07
TCF12-222	ENST00000561152	FRMPD1	Q5SYB0	1578 aa		40.48	■■■■■ 4.07
TCF12-222	ENST00000561152	ITSN2	Q9NZM3	1697 aa		40.45	■■■■■ 4.07
TCF12-222	ENST00000561152	NCOA2	Q15596	1464 aa		40.44	■■■■■ 4.06
TCF12-222	ENST00000561152	POGZ	Q7Z3K3	1410 aa		40.42	■■■■■ 4.06
TCF12-222	ENST00000561152	CFDP1	Q9UEE9	299 aa	Predicted RBP	40.41	■■■■■ 4.06
TCF12-222	ENST00000561152	KANK4	Q5T7N3	995 aa	Predicted RBP	40.38	■■■■■ 4.05
TCF12-222	ENST00000561152	ABCC1	P33527	1531 aa		40.37	■■■■■ 4.05
TCF12-222	ENST00000561152	ZMYM4	Q5VZL5	1548 aa		40.37	■■■■■ 4.05
TCF12-222	ENST00000561152	ZNF518A	Q6AHZ1	1483 aa		40.35	■■■■■ 4.05
TCF12-222	ENST00000561152	ZNF777	Q9ULD5	760 aa	Predicted RBP	40.35	■■■■■ 4.05
TCF12-222	ENST00000561152	SAMD9L	Q8IVG5	1584 aa		40.32	■■■■■ 4.05
TCF12-222	ENST00000561152	PLEKHH2	Q8IVE3	1493 aa		40.32	■■■■■ 4.04
TCF12-222	ENST00000561152	MAGI2	Q86UL8	1455 aa		40.31	■■■■■ 4.04
TCF12-222	ENST00000561152	ARHGEF40	Q8TER5	1519 aa		40.25	■■■■■ 4.03
TCF12-222	ENST00000561152	KDM5C	P41229	1560 aa		40.24	■■■■■ 4.03
TCF12-222	ENST00000561152	ARHGEF12	Q9NZN5	1544 aa		40.24	■■■■■ 4.03
TCF12-222	ENST00000561152	KIAA1107	Q9UPP5	1409 aa		40.24	■■■■■ 4.03
TCF12-222	ENST00000561152	ZFYVE16	Q7Z3T8	1539 aa		40.23	■■■■■ 4.03
TCF12-222	ENST00000561152	SYCP2	Q9BX26	1530 aa		40.22	■■■■■ 4.03
TCF12-222	ENST00000561152	AFAP1	Q8N556	730 aa		40.22	■■■■■ 4.03
TCF12-222	ENST00000561152	TRAPPC8	Q9Y2L5	1435 aa		40.19	■■■■■ 4.02
TCF12-222	ENST00000561152	HECW2	Q9P2P5	1572 aa		40.16	■■■■■ 4.02
TCF12-222	ENST00000561152	HNRNPM	P52272	730 aa	Known RBP eCLIP	40.14	■■■■■ 4.02	9e-7	■■■■□ 22.2
TCF12-222	ENST00000561152	MYOM3	Q5VTT5	1437 aa		40.14	■■■■■ 4.02
TCF12-222	ENST00000561152	MYT1L	Q9UL68	1186 aa		40.13	■■■■■ 4.01
TCF12-222	ENST00000561152	YEATS2	Q9ULM3	1422 aa		40.13	■■■■■ 4.01
TCF12-222	ENST00000561152	MLH3	Q9UHC1	1453 aa		40.12	■■■■■ 4.01
TCF12-222	ENST00000561152	ZNF644	Q9H582	1327 aa	Predicted RBP	40.11	■■■■■ 4.01
TCF12-222	ENST00000561152	CAMSAP2	Q08AD1	1489 aa		40.1	■■■■■ 4.01
TCF12-222	ENST00000561152	MIA2	Q96PC5	1412 aa		40.09	■■■■■ 4.01
TCF12-222	ENST00000561152	ATP10A	O60312	1499 aa		40.05	■■■■■ 4
TCF12-222	ENST00000561152	MBD5	Q9P267	1494 aa		40.03	■■■■■ 4
TCF12-222	ENST00000561152	SPAG9	O60271	1321 aa	Known RBP	40.02	■■■■■ 4
TCF12-222	ENST00000561152	KDM4F	A0A1W2PPD8	638 aa		40.02	■■■■■ 4
TCF12-222	ENST00000561152	C9orf84	Q5VXU9	1444 aa		40.01	■■■■■ 4
TCF12-222	ENST00000561152	ARID4B	Q4LE39	1312 aa	Predicted RBP	40.01	■■■■■ 4
TCF12-222	ENST00000561152	RSPH4A	Q5TD94	716 aa		40.01	■■■■■ 4
TCF12-222	ENST00000561152	AEBP2	Q6ZN18	517 aa	Predicted RBP	39.99	■■■■□ 3.99
TCF12-222	ENST00000561152	KIDINS220	Q9ULH0	1771 aa		39.99	■■■■□ 3.99
TCF12-222	ENST00000561152	DIP2C	Q9Y2E4	1556 aa		39.98	■■■■□ 3.99
TCF12-222	ENST00000561152	CCDC141	Q6ZP82	1450 aa		39.96	■■■■□ 3.99
TCF12-222	ENST00000561152	ABCA6	Q8N139	1617 aa		39.96	■■■■□ 3.99
TCF12-222	ENST00000561152	ATP7A	Q04656	1500 aa		39.95	■■■■□ 3.99
TCF12-222	ENST00000561152	ARHGEF5	Q12774	1597 aa		39.94	■■■■□ 3.98
TCF12-222	ENST00000561152	INO80	Q9ULG1	1556 aa	Predicted RBP	39.93	■■■■□ 3.98
TCF12-222	ENST00000561152	RERE	Q9P2R6	1566 aa		39.92	■■■■□ 3.98
TCF12-222	ENST00000561152	BCORL1	Q5H9F3	1711 aa		39.9	■■■■□ 3.98
TCF12-222	ENST00000561152	PTPN23	Q9H3S7	1636 aa		39.9	■■■■□ 3.98
TCF12-222	ENST00000561152	FGD6	Q6ZV73	1430 aa		39.9	■■■■□ 3.98
TCF12-222	ENST00000561152	RTEL1-TNFRSF6B	F6WH68	1400 aa		39.87	■■■■□ 3.97
TCF12-222	ENST00000561152	SIGLEC1	Q9BZZ2	1709 aa		39.86	■■■■□ 3.97
TCF12-222	ENST00000561152	TSPY4	P0CV99	314 aa		39.83	■■■■□ 3.97
TCF12-222	ENST00000561152	TSPY10	P0CW01	314 aa		39.83	■■■■□ 3.97
TCF12-222	ENST00000561152	ADAMTSL3	P82987	1691 aa		39.83	■■■■□ 3.97
TCF12-222	ENST00000561152	TCOF1	Q13428	1488 aa	Known RBP	39.81	■■■■□ 3.96
TCF12-222	ENST00000561152	ADGB	Q8N7X0	1667 aa		39.77	■■■■□ 3.96
TCF12-222	ENST00000561152	AGL	P35573	1532 aa		39.77	■■■■□ 3.96
TCF12-222	ENST00000561152	A2M	P01023	1474 aa		39.74	■■■■□ 3.95
TCF12-222	ENST00000561152	MAST1	Q9Y2H9	1570 aa		39.73	■■■■□ 3.95
TCF12-222	ENST00000561152	PPARGC1B	Q86YN6	1023 aa	Known RBP	39.73	■■■■□ 3.95
TCF12-222	ENST00000561152	MLEC	Q14165	292 aa		39.71	■■■■□ 3.95
TCF12-222	ENST00000561152	MADD	Q8WXG6	1647 aa		39.71	■■■■□ 3.95
TCF12-222	ENST00000561152	PLXNC1	O60486	1568 aa		39.68	■■■■□ 3.94
TCF12-222	ENST00000561152	DNMT1	P26358	1616 aa	Known RBP	39.68	■■■■□ 3.94
TCF12-222	ENST00000561152	CROCC2	H7BZ55	1655 aa		39.67	■■■■□ 3.94
TCF12-222	ENST00000561152	SHANK2	Q9UPX8	1470 aa		39.65	■■■■□ 3.94
TCF12-222	ENST00000561152	ABCC5	O15440	1437 aa		39.64	■■■■□ 3.94
TCF12-222	ENST00000561152	DAPK1	P53355	1430 aa		39.64	■■■■□ 3.94
TCF12-222	ENST00000561152	FER1L4	A9Z1Z3	1794 aa		39.64	■■■■□ 3.94
TCF12-222	ENST00000561152	FAM50A	Q14320	339 aa	Known RBP	39.63	■■■■□ 3.93
TCF12-222	ENST00000561152	DHX29	Q7Z478	1369 aa	Known RBP	39.61	■■■■□ 3.93
TCF12-222	ENST00000561152	RIMS1	Q86UR5	1692 aa	Known RBP	39.61	■■■■□ 3.93
TCF12-222	ENST00000561152	PTPRM	P28827	1452 aa		39.6	■■■■□ 3.93
TCF12-222	ENST00000561152	ESF1	Q9H501	851 aa	Known RBP	39.51	■■■■□ 3.92
TCF12-222	ENST00000561152	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	39.47	■■■■□ 3.91
TCF12-222	ENST00000561152	DUOX2	Q9NRD8	1548 aa		39.45	■■■■□ 3.91
TCF12-222	ENST00000561152	ANKRD30A	Q9BXX3	1397 aa		39.45	■■■■□ 3.91
TCF12-222	ENST00000561152	CNTLN	Q9NXG0	1405 aa		39.44	■■■■□ 3.9
TCF12-222	ENST00000561152	GGT6	Q6P531	493 aa		39.43	■■■■□ 3.9
TCF12-222	ENST00000561152	KIF15	Q9NS87	1388 aa		39.43	■■■■□ 3.9
TCF12-222	ENST00000561152	KIF3B	O15066	747 aa		39.42	■■■■□ 3.9
TCF12-222	ENST00000561152	PPP6R1	Q9UPN7	881 aa		39.42	■■■■□ 3.9
TCF12-222	ENST00000561152	CHIC2	Q9UKJ5	165 aa		39.41	■■■■□ 3.9
TCF12-222	ENST00000561152	EIF2AK4	Q9P2K8	1649 aa	Known RBP	39.4	■■■■□ 3.9
TCF12-222	ENST00000561152	RRBP1	Q9P2E9	1410 aa	Known RBP	39.4	■■■■□ 3.9
TCF12-222	ENST00000561152	ADGRL2	O95490	1459 aa		39.38	■■■■□ 3.9
TCF12-222	ENST00000561152	RRP7BP	Q9NSQ0	103 aa		39.38	■■■■□ 3.89
TCF12-222	ENST00000561152	NCOA1	Q15788	1441 aa		39.36	■■■■□ 3.89
TCF12-222	ENST00000561152	ERBIN	Q96RT1	1412 aa		39.34	■■■■□ 3.89
TCF12-222	ENST00000561152	MROH2A	A6NES4	1674 aa		39.33	■■■■□ 3.89

Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms