RNA–Protein interactions for RNA: ENST00000561116.5

FAM227B-213, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-213ENST00000561116 ILDR1Q86SU0 546 aaPredicted RBP9.23□□□□□ -0.93
FAM227B-213ENST00000561116 EFCAB3Q8N7B9 438 aa9.21□□□□□ -0.94
FAM227B-213ENST00000561116 EMP3P54852 163 aa9.2□□□□□ -0.94
FAM227B-213ENST00000561116 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
FAM227B-213ENST00000561116 NKX1-1Q15270 411 aaPredicted RBP9.18□□□□□ -0.94
FAM227B-213ENST00000561116 GTPBP6O43824 516 aaPredicted RBP9.17□□□□□ -0.94
FAM227B-213ENST00000561116 ZNF710Q8N1W2 664 aa9.16□□□□□ -0.94
FAM227B-213ENST00000561116 FAM205CA6NFA0 338 aa9.15□□□□□ -0.94
FAM227B-213ENST00000561116 BCANQ96GW7 911 aa9.15□□□□□ -0.94
FAM227B-213ENST00000561116 SOX12O15370 315 aa9.14□□□□□ -0.95
FAM227B-213ENST00000561116 KDM2AQ9Y2K7 1162 aa9.13□□□□□ -0.95
FAM227B-213ENST00000561116 SPNS2Q8IVW8 549 aa9.12□□□□□ -0.95
FAM227B-213ENST00000561116 DOK7Q18PE1 504 aa9.11□□□□□ -0.95
FAM227B-213ENST00000561116 HS3ST6Q96QI5 342 aa9.11□□□□□ -0.95
FAM227B-213ENST00000561116 RIMBP2O15034 1052 aa9.1□□□□□ -0.95
FAM227B-213ENST00000561116 MMRN1Q13201 1228 aa9.09□□□□□ -0.95
FAM227B-213ENST00000561116 PHF8Q9UPP1 1060 aa9.07□□□□□ -0.96
FAM227B-213ENST00000561116 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
FAM227B-213ENST00000561116 NLRP6P59044 892 aa9.06□□□□□ -0.96
FAM227B-213ENST00000561116 MICALL2Q8IY33 904 aa9.06□□□□□ -0.96
FAM227B-213ENST00000561116 ERBB3P21860 1342 aa9.05□□□□□ -0.96
FAM227B-213ENST00000561116 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
FAM227B-213ENST00000561116 POTEB3A0JP26 581 aa9.03□□□□□ -0.96
FAM227B-213ENST00000561116 POTEBQ6S5H4 581 aa9.03□□□□□ -0.96
FAM227B-213ENST00000561116 MFRPQ9BY79 579 aa9.02□□□□□ -0.97
FAM227B-213ENST00000561116 WDR70Q9NW82 654 aa9.02□□□□□ -0.97
FAM227B-213ENST00000561116 MS4A4AQ96JQ5 239 aa9.01□□□□□ -0.97
FAM227B-213ENST00000561116 TMEM92Q6UXU6 159 aa8.99□□□□□ -0.97
FAM227B-213ENST00000561116 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
FAM227B-213ENST00000561116 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
FAM227B-213ENST00000561116 NBR1Q14596 966 aa8.98□□□□□ -0.97
FAM227B-213ENST00000561116 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
FAM227B-213ENST00000561116 VARS2Q5ST30 1063 aaKnown RBP8.96□□□□□ -0.98
FAM227B-213ENST00000561116 FBXO22Q8NEZ5 403 aa8.94□□□□□ -0.98
FAM227B-213ENST00000561116 ARSIQ5FYB1 569 aa8.92□□□□□ -0.98
FAM227B-213ENST00000561116 GPR153Q6NV75 609 aa8.92□□□□□ -0.98
FAM227B-213ENST00000561116 P3H3Q8IVL6 736 aa8.92□□□□□ -0.98
FAM227B-213ENST00000561116 ZNF687Q8N1G0 1237 aa8.9□□□□□ -0.98
FAM227B-213ENST00000561116 PPP1R37O75864 691 aa8.89□□□□□ -0.99
FAM227B-213ENST00000561116 PDE4AP27815 886 aa8.87□□□□□ -0.99
FAM227B-213ENST00000561116 CADPS2Q86UW7 1296 aa8.86□□□□□ -0.99
FAM227B-213ENST00000561116 C2orf72A6NCS6 295 aa8.85□□□□□ -0.99
FAM227B-213ENST00000561116 TMC2Q8TDI7 906 aa8.85□□□□□ -0.99
FAM227B-213ENST00000561116 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -0.99
FAM227B-213ENST00000561116 KHSRPQ92945 711 aaKnown RBP eCLIP8.84□□□□□ -0.99
FAM227B-213ENST00000561116 ANKRD13DQ6ZTN6 518 aa8.83□□□□□ -1
FAM227B-213ENST00000561116 RNF166Q96A37 237 aaPredicted RBP8.83□□□□□ -1
FAM227B-213ENST00000561116 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
FAM227B-213ENST00000561116 LARP6Q9BRS8 491 aaKnown RBP8.81□□□□□ -1
FAM227B-213ENST00000561116 KIF3CO14782 793 aa8.8□□□□□ -1
FAM227B-213ENST00000561116 E2F4Q16254 413 aa8.8□□□□□ -1
FAM227B-213ENST00000561116 NUDT7P0C024 238 aa8.79□□□□□ -1
FAM227B-213ENST00000561116 TULP1O00294 542 aaPredicted RBP8.78□□□□□ -1
FAM227B-213ENST00000561116 PTGER2P43116 358 aa8.78□□□□□ -1
FAM227B-213ENST00000561116 TPRNQ4KMQ1 711 aa8.77□□□□□ -1.01
FAM227B-213ENST00000561116 ARHGEF1Q92888 912 aaKnown RBP8.77□□□□□ -1.01
FAM227B-213ENST00000561116 DDX27Q96GQ7 796 aaKnown RBP8.77□□□□□ -1.01
FAM227B-213ENST00000561116 SLC34A2O95436 690 aa8.76□□□□□ -1.01
FAM227B-213ENST00000561116 PCDHGA4Q9Y5G9 962 aa8.76□□□□□ -1.01
FAM227B-213ENST00000561116 KCNV2Q8TDN2 545 aa8.75□□□□□ -1.01
FAM227B-213ENST00000561116 LHX6Q9UPM6 363 aa8.75□□□□□ -1.01
FAM227B-213ENST00000561116 NCKAP5LQ9HCH0 1330 aa8.74□□□□□ -1.01
FAM227B-213ENST00000561116 LSM11P83369 360 aaKnown RBP eCLIP8.73□□□□□ -1.01
FAM227B-213ENST00000561116 CRISPLD2Q9H0B8 497 aa8.73□□□□□ -1.01
FAM227B-213ENST00000561116 PRKCSHP14314 528 aaPredicted RBP8.72□□□□□ -1.01
FAM227B-213ENST00000561116 PBX2P40425 430 aa8.72□□□□□ -1.01
FAM227B-213ENST00000561116 GPHNQ9NQX3 736 aaPredicted RBP8.72□□□□□ -1.01
FAM227B-213ENST00000561116 MFSD10Q14728 455 aa8.71□□□□□ -1.02
FAM227B-213ENST00000561116 TBC1D12O60347 775 aa8.7□□□□□ -1.02
FAM227B-213ENST00000561116 PSDA5PKW4 1024 aaPredicted RBP8.69□□□□□ -1.02
FAM227B-213ENST00000561116 AXIN2Q9Y2T1 843 aa8.69□□□□□ -1.02
FAM227B-213ENST00000561116 PLPP6Q8IY26 295 aa8.68□□□□□ -1.02
FAM227B-213ENST00000561116 PPP1R15BQ5SWA1 713 aa8.67□□□□□ -1.02
FAM227B-213ENST00000561116 SMYD5Q6GMV2 418 aa8.67□□□□□ -1.02
FAM227B-213ENST00000561116 ARHGAP33O14559 1287 aa8.66□□□□□ -1.02
FAM227B-213ENST00000561116 FOXK1P85037 733 aa8.66□□□□□ -1.02
FAM227B-213ENST00000561116 PTCD2Q8WV60 388 aaKnown RBP8.65□□□□□ -1.02
FAM227B-213ENST00000561116 STAC3Q96MF2 364 aa8.64□□□□□ -1.03
FAM227B-213ENST00000561116 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
FAM227B-213ENST00000561116 ARIH1Q9Y4X5 557 aaPredicted RBP8.62□□□□□ -1.03
FAM227B-213ENST00000561116 DSG2Q14126 1118 aa8.61□□□□□ -1.03
FAM227B-213ENST00000561116 PPP4R3BQ5MIZ7 849 aa8.61□□□□□ -1.03
FAM227B-213ENST00000561116 POTEEQ6S8J3 1075 aa8.61□□□□□ -1.03
FAM227B-213ENST00000561116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.61□□□□□ -1.03
FAM227B-213ENST00000561116 SEMA3EO15041 775 aa8.6□□□□□ -1.03
FAM227B-213ENST00000561116 LMOD2Q6P5Q4 547 aa8.6□□□□□ -1.03
FAM227B-213ENST00000561116 ADGRD1Q6QNK2 874 aa8.6□□□□□ -1.03
FAM227B-213ENST00000561116 KCNH8Q96L42 1107 aa8.6□□□□□ -1.03
FAM227B-213ENST00000561116 SPDYE16A6NNV3 312 aaPredicted RBP8.58□□□□□ -1.04
FAM227B-213ENST00000561116 HCSTQ9UBK5 93 aa8.58□□□□□ -1.04
FAM227B-213ENST00000561116 TESPA1A2RU30 521 aaPredicted RBP8.57□□□□□ -1.04
FAM227B-213ENST00000561116 PSEN2P49810 448 aa8.57□□□□□ -1.04
FAM227B-213ENST00000561116 MAP3K9P80192 1104 aa8.57□□□□□ -1.04
FAM227B-213ENST00000561116 KDM4FA0A1W2PPD8 638 aa8.56□□□□□ -1.04
FAM227B-213ENST00000561116 TK2O00142 265 aa8.56□□□□□ -1.04
FAM227B-213ENST00000561116 UPF1Q92900 1129 aaKnown RBP eCLIP8.56□□□□□ -1.04
FAM227B-213ENST00000561116 DPYSL4O14531 572 aa8.54□□□□□ -1.04
FAM227B-213ENST00000561116 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
FAM227B-213ENST00000561116 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
FAM227B-213ENST00000561116 KCNK17Q96T54 332 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms