RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 SAMD9Q5K651 1589 aa11.57□□□□□ -0.56
ZEB1-221ENST00000561061 FRMPD1Q5SYB0 1578 aa11.57□□□□□ -0.56
ZEB1-221ENST00000561061 RAPGEF6Q8TEU7 1601 aa11.56□□□□□ -0.56
ZEB1-221ENST00000561061 MADDQ8WXG6 1647 aa11.56□□□□□ -0.56
ZEB1-221ENST00000561061 RICTORQ6R327 1708 aa11.55□□□□□ -0.56
ZEB1-221ENST00000561061 PRXQ9BXM0 1461 aa11.55□□□□□ -0.56
ZEB1-221ENST00000561061 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
ZEB1-221ENST00000561061 RIMS1Q86UR5 1692 aaKnown RBP11.54□□□□□ -0.56
ZEB1-221ENST00000561061 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
ZEB1-221ENST00000561061 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
ZEB1-221ENST00000561061 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
ZEB1-221ENST00000561061 ATP10BO94823 1461 aa11.51□□□□□ -0.57
ZEB1-221ENST00000561061 PTPRMP28827 1452 aa11.51□□□□□ -0.57
ZEB1-221ENST00000561061 ARHGEF40Q8TER5 1519 aa11.51□□□□□ -0.57
ZEB1-221ENST00000561061 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
ZEB1-221ENST00000561061 NEO1Q92859 1461 aa11.5□□□□□ -0.57
ZEB1-221ENST00000561061 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
ZEB1-221ENST00000561061 SIGLEC1Q9BZZ2 1709 aa11.49□□□□□ -0.57
ZEB1-221ENST00000561061 CFAP74Q9C0B2 1584 aa11.49□□□□□ -0.57
ZEB1-221ENST00000561061 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
ZEB1-221ENST00000561061 PHLDB1Q86UU1 1377 aa11.47□□□□□ -0.57
ZEB1-221ENST00000561061 ARID3CA6NKF2 412 aa11.46□□□□□ -0.57
ZEB1-221ENST00000561061 FBXO41Q8TF61 875 aa11.46□□□□□ -0.57
ZEB1-221ENST00000561061 LMTK3Q96Q04 1460 aa11.45□□□□□ -0.58
ZEB1-221ENST00000561061 NUP153P49790 1475 aaKnown RBP11.44□□□□□ -0.58
ZEB1-221ENST00000561061 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
ZEB1-221ENST00000561061 ZNF692Q9BU19 519 aaPredicted RBP11.44□□□□□ -0.58
ZEB1-221ENST00000561061 TTC37Q6PGP7 1564 aa11.44□□□□□ -0.58
ZEB1-221ENST00000561061 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
ZEB1-221ENST00000561061 ZMYM4Q5VZL5 1548 aa11.43□□□□□ -0.58
ZEB1-221ENST00000561061 RAPGEF3O95398 923 aa11.42□□□□□ -0.58
ZEB1-221ENST00000561061 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
ZEB1-221ENST00000561061 MYO5CQ9NQX4 1742 aa11.4□□□□□ -0.58
ZEB1-221ENST00000561061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.58
ZEB1-221ENST00000561061 EFCAB5A4FU69 1503 aa11.4□□□□□ -0.59
ZEB1-221ENST00000561061 PREX1Q8TCU6 1659 aa11.4□□□□□ -0.59
ZEB1-221ENST00000561061 DENND4BO75064 1496 aaPredicted RBP11.39□□□□□ -0.59
ZEB1-221ENST00000561061 FAM9AQ8IZU1 332 aaPredicted RBP11.39□□□□□ -0.59
ZEB1-221ENST00000561061 SETD1BQ9UPS6 1966 aaKnown RBP11.39□□□□□ -0.59
ZEB1-221ENST00000561061 ZFYVE16Q7Z3T8 1539 aa11.39□□□□□ -0.59
ZEB1-221ENST00000561061 FANCAO15360 1455 aa11.38□□□□□ -0.59
ZEB1-221ENST00000561061 FHOD3Q2V2M9 1422 aa11.38□□□□□ -0.59
ZEB1-221ENST00000561061 HECW1Q76N89 1606 aa11.38□□□□□ -0.59
ZEB1-221ENST00000561061 AKNAQ7Z591 1439 aa11.37□□□□□ -0.59
ZEB1-221ENST00000561061 ARID4BQ4LE39 1312 aaPredicted RBP11.36□□□□□ -0.59
ZEB1-221ENST00000561061 CHRDL2Q6WN34 429 aa11.35□□□□□ -0.59
ZEB1-221ENST00000561061 STRCQ7RTU9 1775 aa11.35□□□□□ -0.59
ZEB1-221ENST00000561061 LRRIQ1Q96JM4 1722 aa11.35□□□□□ -0.59
ZEB1-221ENST00000561061 PITPNM1O00562 1244 aa11.34□□□□□ -0.59
ZEB1-221ENST00000561061 CDK13Q14004 1512 aaKnown RBP11.34□□□□□ -0.59
ZEB1-221ENST00000561061 YEATS2Q9ULM3 1422 aa11.34□□□□□ -0.59
ZEB1-221ENST00000561061 POGZQ7Z3K3 1410 aa11.33□□□□□ -0.6
ZEB1-221ENST00000561061 MAGI2Q86UL8 1455 aa11.32□□□□□ -0.6
ZEB1-221ENST00000561061 ARHGEF12Q9NZN5 1544 aa11.32□□□□□ -0.6
ZEB1-221ENST00000561061 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
ZEB1-221ENST00000561061 CDC42BPBQ9Y5S2 1711 aa11.3□□□□□ -0.6
ZEB1-221ENST00000561061 EEA1Q15075 1411 aa11.3□□□□□ -0.6
ZEB1-221ENST00000561061 HSPA2P54652 639 aa11.3□□□□□ -0.6
ZEB1-221ENST00000561061 KIF14Q15058 1648 aa11.3□□□□□ -0.6
ZEB1-221ENST00000561061 C3P01024 1663 aa11.29□□□□□ -0.6
ZEB1-221ENST00000561061 PLEKHD1A6NEE1 506 aa11.28□□□□□ -0.6
ZEB1-221ENST00000561061 KDM5CP41229 1560 aa11.28□□□□□ -0.6
ZEB1-221ENST00000561061 C9orf84Q5VXU9 1444 aa11.26□□□□□ -0.61
ZEB1-221ENST00000561061 DIP2CQ9Y2E4 1556 aa11.26□□□□□ -0.61
ZEB1-221ENST00000561061 RANGAP1P46060 587 aaPredicted RBP11.26□□□□□ -0.61
ZEB1-221ENST00000561061 POTEHQ6S545 545 aa11.26□□□□□ -0.61
ZEB1-221ENST00000561061 ABCA6Q8N139 1617 aa11.26□□□□□ -0.61
ZEB1-221ENST00000561061 ITSN2Q9NZM3 1697 aa11.26□□□□□ -0.61
ZEB1-221ENST00000561061 PLCH2O75038 1416 aa11.26□□□□□ -0.61
ZEB1-221ENST00000561061 SCAPERQ9BY12 1400 aa11.26□□□□□ -0.61
ZEB1-221ENST00000561061 ATP10AO60312 1499 aa11.25□□□□□ -0.61
ZEB1-221ENST00000561061 PREX2Q70Z35 1606 aa11.24□□□□□ -0.61
ZEB1-221ENST00000561061 REREQ9P2R6 1566 aa11.24□□□□□ -0.61
ZEB1-221ENST00000561061 CDC42BPAQ5VT25 1732 aa11.23□□□□□ -0.61
ZEB1-221ENST00000561061 MLECQ14165 292 aa11.23□□□□□ -0.61
ZEB1-221ENST00000561061 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
ZEB1-221ENST00000561061 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
ZEB1-221ENST00000561061 ZNF518AQ6AHZ1 1483 aa11.22□□□□□ -0.61
ZEB1-221ENST00000561061 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
ZEB1-221ENST00000561061 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
ZEB1-221ENST00000561061 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.61
ZEB1-221ENST00000561061 ARHGAP5Q13017 1502 aa11.21□□□□□ -0.61
ZEB1-221ENST00000561061 MROH2AA6NES4 1674 aa11.2□□□□□ -0.62
ZEB1-221ENST00000561061 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
ZEB1-221ENST00000561061 ABCC1P33527 1531 aa11.19□□□□□ -0.62
ZEB1-221ENST00000561061 ARHGAP35Q9NRY4 1499 aa11.19□□□□□ -0.62
ZEB1-221ENST00000561061 FMN1Q68DA7 1419 aa11.18□□□□□ -0.62
ZEB1-221ENST00000561061 UHRF1BP1Q6BDS2 1440 aa11.18□□□□□ -0.62
ZEB1-221ENST00000561061 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
ZEB1-221ENST00000561061 TROQ12816 1431 aaPredicted RBP11.17□□□□□ -0.62
ZEB1-221ENST00000561061 AGLP35573 1532 aa11.16□□□□□ -0.62
ZEB1-221ENST00000561061 CEBPAP49715 358 aaPredicted RBP11.16□□□□□ -0.62
ZEB1-221ENST00000561061 EFCAB2Q5VUJ9 269 aa11.16□□□□□ -0.62
ZEB1-221ENST00000561061 ZNF142P52746 1687 aaPredicted RBP11.16□□□□□ -0.62
ZEB1-221ENST00000561061 MLH3Q9UHC1 1453 aa11.15□□□□□ -0.62
ZEB1-221ENST00000561061 LTBP4Q8N2S1 1624 aa11.15□□□□□ -0.62
ZEB1-221ENST00000561061 CLIP1P30622 1438 aa11.15□□□□□ -0.62
ZEB1-221ENST00000561061 FXR2P51116 673 aaKnown RBP eCLIP11.14□□□□□ -0.63
ZEB1-221ENST00000561061 PTPRTO14522 1441 aa11.14□□□□□ -0.63
ZEB1-221ENST00000561061 CLTCQ00610 1675 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms