RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 KIF14Q15058 1648 aa30.31■■■□□ 2.44
LINC01220-202ENST00000561000 ZMYM4Q5VZL5 1548 aa30.31■■■□□ 2.44
LINC01220-202ENST00000561000 MAGI2Q86UL8 1455 aa30.31■■■□□ 2.44
LINC01220-202ENST00000561000 MLECQ14165 292 aa30.3■■■□□ 2.44
LINC01220-202ENST00000561000 PLPPR3Q6T4P5 718 aa30.28■■■□□ 2.44
LINC01220-202ENST00000561000 AFAP1Q8N556 730 aa30.26■■■□□ 2.43
LINC01220-202ENST00000561000 MYT1LQ9UL68 1186 aa30.26■■■□□ 2.43
LINC01220-202ENST00000561000 ARHGAP5Q13017 1502 aa30.26■■■□□ 2.43
LINC01220-202ENST00000561000 MADDQ8WXG6 1647 aa30.25■■■□□ 2.43
LINC01220-202ENST00000561000 CCDC18Q5T9S5 1454 aa30.25■■■□□ 2.43
LINC01220-202ENST00000561000 MYO5CQ9NQX4 1742 aa30.25■■■□□ 2.43
LINC01220-202ENST00000561000 PCF11O94913 1555 aaKnown RBP30.24■■■□□ 2.43
LINC01220-202ENST00000561000 ILDR1Q86SU0 546 aaPredicted RBP30.23■■■□□ 2.43
LINC01220-202ENST00000561000 LRRIQ1Q96JM4 1722 aa30.22■■■□□ 2.43
LINC01220-202ENST00000561000 ATP10AO60312 1499 aa30.19■■■□□ 2.42
LINC01220-202ENST00000561000 ZNF518AQ6AHZ1 1483 aa30.17■■■□□ 2.42
LINC01220-202ENST00000561000 FYCO1Q9BQS8 1478 aa30.16■■■□□ 2.42
LINC01220-202ENST00000561000 RIMS1Q86UR5 1692 aaKnown RBP30.14■■■□□ 2.42
LINC01220-202ENST00000561000 C9orf84Q5VXU9 1444 aa30.13■■■□□ 2.41
LINC01220-202ENST00000561000 SIGLEC1Q9BZZ2 1709 aa30.12■■■□□ 2.41
LINC01220-202ENST00000561000 ZNF777Q9ULD5 760 aaPredicted RBP30.11■■■□□ 2.41
LINC01220-202ENST00000561000 TRAPPC8Q9Y2L5 1435 aa30.07■■■□□ 2.4
LINC01220-202ENST00000561000 CDC42BPBQ9Y5S2 1711 aa30.06■■■□□ 2.4
LINC01220-202ENST00000561000 LMTK3Q96Q04 1460 aa30.05■■■□□ 2.4
LINC01220-202ENST00000561000 KDM5CP41229 1560 aa30.04■■■□□ 2.4
LINC01220-202ENST00000561000 HSPA2P54652 639 aa30.04■■■□□ 2.4
LINC01220-202ENST00000561000 ARHGEF12Q9NZN5 1544 aa30.04■■■□□ 2.4
LINC01220-202ENST00000561000 PREX2Q70Z35 1606 aa30.03■■■□□ 2.4
LINC01220-202ENST00000561000 CEBPAP49715 358 aaPredicted RBP30.01■■■□□ 2.39
LINC01220-202ENST00000561000 MLH3Q9UHC1 1453 aa30■■■□□ 2.39
LINC01220-202ENST00000561000 ABCC1P33527 1531 aa30■■■□□ 2.39
LINC01220-202ENST00000561000 HNRNPMP52272 730 aaKnown RBP eCLIP29.98■■■□□ 2.39
LINC01220-202ENST00000561000 CFDP1Q9UEE9 299 aaPredicted RBP29.98■■■□□ 2.39
LINC01220-202ENST00000561000 MTUS2Q5JR59 1369 aa29.98■■■□□ 2.39
LINC01220-202ENST00000561000 GPATCH8Q9UKJ3 1502 aaKnown RBP29.96■■■□□ 2.39
LINC01220-202ENST00000561000 DIP2CQ9Y2E4 1556 aa29.95■■■□□ 2.39
LINC01220-202ENST00000561000 CCNB3Q8WWL7 1395 aa29.95■■■□□ 2.39
LINC01220-202ENST00000561000 FER1L4A9Z1Z3 1794 aa29.95■■■□□ 2.38
LINC01220-202ENST00000561000 CEP162Q5TB80 1403 aa29.93■■■□□ 2.38
LINC01220-202ENST00000561000 CDC42BPAQ5VT25 1732 aa29.93■■■□□ 2.38
LINC01220-202ENST00000561000 ESF1Q9H501 851 aaKnown RBP29.92■■■□□ 2.38
LINC01220-202ENST00000561000 ITSN2Q9NZM3 1697 aa29.9■■■□□ 2.38
LINC01220-202ENST00000561000 SPAG9O60271 1321 aaKnown RBP29.9■■■□□ 2.38
LINC01220-202ENST00000561000 ABCA6Q8N139 1617 aa29.89■■■□□ 2.38
LINC01220-202ENST00000561000 SAMD9LQ8IVG5 1584 aa29.86■■■□□ 2.37
LINC01220-202ENST00000561000 SYCP2Q9BX26 1530 aa29.86■■■□□ 2.37
LINC01220-202ENST00000561000 REREQ9P2R6 1566 aa29.86■■■□□ 2.37
LINC01220-202ENST00000561000 LOC105371045A0A1W2PR82 267 aa29.85■■■□□ 2.37
LINC01220-202ENST00000561000 AGLP35573 1532 aa29.82■■■□□ 2.36
LINC01220-202ENST00000561000 KIAA1107Q9UPP5 1409 aa29.82■■■□□ 2.36
LINC01220-202ENST00000561000 FBXO41Q8TF61 875 aa29.82■■■□□ 2.36
LINC01220-202ENST00000561000 PLEKHH2Q8IVE3 1493 aa29.81■■■□□ 2.36
LINC01220-202ENST00000561000 ZNF644Q9H582 1327 aaPredicted RBP29.81■■■□□ 2.36
LINC01220-202ENST00000561000 KIDINS220Q9ULH0 1771 aa29.81■■■□□ 2.36
LINC01220-202ENST00000561000 EHBP1L1Q8N3D4 1523 aa29.75■■■□□ 2.35
LINC01220-202ENST00000561000 UHRF1BP1Q6BDS2 1440 aa29.73■■■□□ 2.35
LINC01220-202ENST00000561000 TIAM1Q13009 1591 aa29.7■■■□□ 2.35
LINC01220-202ENST00000561000 ATP7AQ04656 1500 aa29.7■■■□□ 2.34
LINC01220-202ENST00000561000 CNTLNQ9NXG0 1405 aa29.7■■■□□ 2.34
LINC01220-202ENST00000561000 PREX1Q8TCU6 1659 aa29.69■■■□□ 2.34
LINC01220-202ENST00000561000 GGT6Q6P531 493 aa29.68■■■□□ 2.34
LINC01220-202ENST00000561000 A2MP01023 1474 aa29.68■■■□□ 2.34
LINC01220-202ENST00000561000 MBD5Q9P267 1494 aa29.64■■■□□ 2.34
LINC01220-202ENST00000561000 DMRT2Q9Y5R5 561 aa29.64■■■□□ 2.34
LINC01220-202ENST00000561000 ZMYM3Q14202 1370 aa29.64■■■□□ 2.33
LINC01220-202ENST00000561000 C3P01024 1663 aa29.63■■■□□ 2.33
LINC01220-202ENST00000561000 NCOA2Q15596 1464 aa29.63■■■□□ 2.33
LINC01220-202ENST00000561000 INO80Q9ULG1 1556 aaPredicted RBP29.62■■■□□ 2.33
LINC01220-202ENST00000561000 CERKQ8TCT0 537 aa29.61■■■□□ 2.33
LINC01220-202ENST00000561000 SUPT6HQ7KZ85 1726 aaKnown RBP29.61■■■□□ 2.33
LINC01220-202ENST00000561000 SETD1BQ9UPS6 1966 aaKnown RBP29.61■■■□□ 2.33
LINC01220-202ENST00000561000 VPS8Q8N3P4 1428 aa29.6■■■□□ 2.33
LINC01220-202ENST00000561000 RTEL1-TNFRSF6BF6WH68 1400 aa29.56■■■□□ 2.32
LINC01220-202ENST00000561000 RSPH4AQ5TD94 716 aa29.56■■■□□ 2.32
LINC01220-202ENST00000561000 PLXNC1O60486 1568 aa29.55■■■□□ 2.32
LINC01220-202ENST00000561000 DHX29Q7Z478 1369 aaKnown RBP29.53■■■□□ 2.32
LINC01220-202ENST00000561000 PPP6R1Q9UPN7 881 aa29.53■■■□□ 2.32
LINC01220-202ENST00000561000 NPATQ14207 1427 aa29.53■■■□□ 2.32
LINC01220-202ENST00000561000 CAMSAP2Q08AD1 1489 aa29.52■■■□□ 2.32
LINC01220-202ENST00000561000 LRRC9Q6ZRR7 1453 aa29.51■■■□□ 2.31
LINC01220-202ENST00000561000 KANK4Q5T7N3 995 aaPredicted RBP29.51■■■□□ 2.31
LINC01220-202ENST00000561000 CCDC141Q6ZP82 1450 aa29.5■■■□□ 2.31
LINC01220-202ENST00000561000 KIF3BO15066 747 aa29.5■■■□□ 2.31
LINC01220-202ENST00000561000 TSPY4P0CV99 314 aa29.5■■■□□ 2.31
LINC01220-202ENST00000561000 TSPY10P0CW01 314 aa29.5■■■□□ 2.31
LINC01220-202ENST00000561000 STRCQ7RTU9 1775 aa29.48■■■□□ 2.31
LINC01220-202ENST00000561000 MROH2AA6NES4 1674 aa29.47■■■□□ 2.31
LINC01220-202ENST00000561000 ADGBQ8N7X0 1667 aa29.47■■■□□ 2.31
LINC01220-202ENST00000561000 CLTCQ00610 1675 aaKnown RBP29.45■■■□□ 2.31
LINC01220-202ENST00000561000 PTPRTO14522 1441 aa29.45■■■□□ 2.3
LINC01220-202ENST00000561000 PTPRKQ15262 1439 aa29.44■■■□□ 2.3
LINC01220-202ENST00000561000 NCOA1Q15788 1441 aa29.42■■■□□ 2.3
LINC01220-202ENST00000561000 NCKAP5LQ9HCH0 1330 aa29.4■■■□□ 2.3
LINC01220-202ENST00000561000 APLP2Q06481 763 aa29.39■■■□□ 2.3
LINC01220-202ENST00000561000 MAP3K1Q13233 1512 aa29.37■■■□□ 2.29
LINC01220-202ENST00000561000 WASHC2CQ9Y4E1 1318 aa29.37■■■□□ 2.29
LINC01220-202ENST00000561000 CAMSAP1Q5T5Y3 1602 aa29.36■■■□□ 2.29
LINC01220-202ENST00000561000 FBXO31Q5XUX0 539 aaPredicted RBP29.35■■■□□ 2.29
LINC01220-202ENST00000561000 ARHGEF5Q12774 1597 aa29.35■■■□□ 2.29
LINC01220-202ENST00000561000 MYOM3Q5VTT5 1437 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms