RNA–Protein interactions for RNA: ENST00000560999.1

CSHL1-209, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

Gene CSHL1, Length 1,602 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-209ENST00000560999 DENND4BO75064 1496 aaPredicted RBP20.46■□□□□ 0.87
CSHL1-209ENST00000560999 LRRC9Q6ZRR7 1453 aa20.46■□□□□ 0.87
CSHL1-209ENST00000560999 PPARGC1BQ86YN6 1023 aaKnown RBP20.45■□□□□ 0.87
CSHL1-209ENST00000560999 ARHGEF40Q8TER5 1519 aa20.45■□□□□ 0.86
CSHL1-209ENST00000560999 ZEB1P37275 1124 aaPredicted RBP20.43■□□□□ 0.86
CSHL1-209ENST00000560999 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
CSHL1-209ENST00000560999 MYO5CQ9NQX4 1742 aa20.43■□□□□ 0.86
CSHL1-209ENST00000560999 ADAMTSL3P82987 1691 aa20.42■□□□□ 0.86
CSHL1-209ENST00000560999 BCORL1Q5H9F3 1711 aa20.4■□□□□ 0.86
CSHL1-209ENST00000560999 SIGLEC1Q9BZZ2 1709 aa20.4■□□□□ 0.86
CSHL1-209ENST00000560999 PLCH2O75038 1416 aa20.4■□□□□ 0.86
CSHL1-209ENST00000560999 MADDQ8WXG6 1647 aa20.39■□□□□ 0.85
CSHL1-209ENST00000560999 EHBP1L1Q8N3D4 1523 aa20.39■□□□□ 0.85
CSHL1-209ENST00000560999 TROQ12816 1431 aaPredicted RBP20.39■□□□□ 0.85
CSHL1-209ENST00000560999 YEATS2Q9ULM3 1422 aa20.39■□□□□ 0.85
CSHL1-209ENST00000560999 ZMYM4Q5VZL5 1548 aa20.38■□□□□ 0.85
CSHL1-209ENST00000560999 ARID4BQ4LE39 1312 aaPredicted RBP20.37■□□□□ 0.85
CSHL1-209ENST00000560999 MTUS2Q5JR59 1369 aa20.36■□□□□ 0.85
CSHL1-209ENST00000560999 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
CSHL1-209ENST00000560999 ZFYVE16Q7Z3T8 1539 aa20.36■□□□□ 0.85
CSHL1-209ENST00000560999 POGZQ7Z3K3 1410 aa20.35■□□□□ 0.85
CSHL1-209ENST00000560999 PTPRMP28827 1452 aa20.35■□□□□ 0.85
CSHL1-209ENST00000560999 CDK11AQ9UQ88 783 aaPredicted RBP20.34■□□□□ 0.85
CSHL1-209ENST00000560999 ARHGAP5Q13017 1502 aa20.33■□□□□ 0.84
CSHL1-209ENST00000560999 SUPT6HQ7KZ85 1726 aaKnown RBP20.33■□□□□ 0.84
CSHL1-209ENST00000560999 RIMS1Q86UR5 1692 aaKnown RBP20.32■□□□□ 0.84
CSHL1-209ENST00000560999 CDC42BPBQ9Y5S2 1711 aa20.31■□□□□ 0.84
CSHL1-209ENST00000560999 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
CSHL1-209ENST00000560999 PREX2Q70Z35 1606 aa20.28■□□□□ 0.84
CSHL1-209ENST00000560999 MAGI2Q86UL8 1455 aa20.26■□□□□ 0.83
CSHL1-209ENST00000560999 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
CSHL1-209ENST00000560999 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
CSHL1-209ENST00000560999 MLECQ14165 292 aa20.24■□□□□ 0.83
CSHL1-209ENST00000560999 PLPPR3Q6T4P5 718 aa20.24■□□□□ 0.83
CSHL1-209ENST00000560999 KDM5CP41229 1560 aa20.22■□□□□ 0.83
CSHL1-209ENST00000560999 AFAP1Q8N556 730 aa20.22■□□□□ 0.83
CSHL1-209ENST00000560999 ZNF518AQ6AHZ1 1483 aa20.22■□□□□ 0.83
CSHL1-209ENST00000560999 ABCC1P33527 1531 aa20.21■□□□□ 0.83
CSHL1-209ENST00000560999 ARHGEF12Q9NZN5 1544 aa20.21■□□□□ 0.83
CSHL1-209ENST00000560999 FER1L4A9Z1Z3 1794 aa20.21■□□□□ 0.83
CSHL1-209ENST00000560999 ITSN2Q9NZM3 1697 aa20.2■□□□□ 0.83
CSHL1-209ENST00000560999 RRBP1Q9P2E9 1410 aaKnown RBP20.2■□□□□ 0.82
CSHL1-209ENST00000560999 ATP10AO60312 1499 aa20.19■□□□□ 0.82
CSHL1-209ENST00000560999 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
CSHL1-209ENST00000560999 ABCA6Q8N139 1617 aa20.19■□□□□ 0.82
CSHL1-209ENST00000560999 DIP2CQ9Y2E4 1556 aa20.19■□□□□ 0.82
CSHL1-209ENST00000560999 TRAPPC8Q9Y2L5 1435 aa20.18■□□□□ 0.82
CSHL1-209ENST00000560999 LMTK3Q96Q04 1460 aa20.16■□□□□ 0.82
CSHL1-209ENST00000560999 MYOM3Q5VTT5 1437 aa20.16■□□□□ 0.82
CSHL1-209ENST00000560999 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
CSHL1-209ENST00000560999 SAMD9LQ8IVG5 1584 aa20.15■□□□□ 0.82
CSHL1-209ENST00000560999 CCNB3Q8WWL7 1395 aa20.14■□□□□ 0.81
CSHL1-209ENST00000560999 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
CSHL1-209ENST00000560999 ZNF777Q9ULD5 760 aaPredicted RBP20.13■□□□□ 0.81
CSHL1-209ENST00000560999 SYCP2Q9BX26 1530 aa20.12■□□□□ 0.81
CSHL1-209ENST00000560999 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
CSHL1-209ENST00000560999 ILDR1Q86SU0 546 aaPredicted RBP20.12■□□□□ 0.81
CSHL1-209ENST00000560999 MIA2Q96PC5 1412 aa20.11■□□□□ 0.81
CSHL1-209ENST00000560999 KIDINS220Q9ULH0 1771 aa20.1■□□□□ 0.81
CSHL1-209ENST00000560999 MLH3Q9UHC1 1453 aa20.1■□□□□ 0.81
CSHL1-209ENST00000560999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.1■□□□□ 0.81
CSHL1-209ENST00000560999 HSPA2P54652 639 aa20.08■□□□□ 0.8
CSHL1-209ENST00000560999 PTPN23Q9H3S7 1636 aa20.07■□□□□ 0.8
CSHL1-209ENST00000560999 REREQ9P2R6 1566 aa20.06■□□□□ 0.8
CSHL1-209ENST00000560999 TCOF1Q13428 1488 aaKnown RBP20.06■□□□□ 0.8
CSHL1-209ENST00000560999 CEBPAP49715 358 aaPredicted RBP20.05■□□□□ 0.8
CSHL1-209ENST00000560999 HNRNPMP52272 730 aaKnown RBP eCLIP20.04■□□□□ 0.8
CSHL1-209ENST00000560999 CFDP1Q9UEE9 299 aaPredicted RBP20.01■□□□□ 0.79
CSHL1-209ENST00000560999 INO80Q9ULG1 1556 aaPredicted RBP20■□□□□ 0.79
CSHL1-209ENST00000560999 AGLP35573 1532 aa19.99■□□□□ 0.79
CSHL1-209ENST00000560999 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
CSHL1-209ENST00000560999 ATP7AQ04656 1500 aa19.99■□□□□ 0.79
CSHL1-209ENST00000560999 ZNF644Q9H582 1327 aaPredicted RBP19.99■□□□□ 0.79
CSHL1-209ENST00000560999 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
CSHL1-209ENST00000560999 C3P01024 1663 aa19.98■□□□□ 0.79
CSHL1-209ENST00000560999 SPAG9O60271 1321 aaKnown RBP19.97■□□□□ 0.79
CSHL1-209ENST00000560999 CAMSAP2Q08AD1 1489 aa19.95■□□□□ 0.78
CSHL1-209ENST00000560999 PLEKHH2Q8IVE3 1493 aa19.95■□□□□ 0.78
CSHL1-209ENST00000560999 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
CSHL1-209ENST00000560999 PLXNC1O60486 1568 aa19.92■□□□□ 0.78
CSHL1-209ENST00000560999 DNMT1P26358 1616 aaKnown RBP19.91■□□□□ 0.78
CSHL1-209ENST00000560999 MBD5Q9P267 1494 aa19.91■□□□□ 0.78
CSHL1-209ENST00000560999 CCER1Q8TC90 406 aaPredicted RBP19.9■□□□□ 0.78
CSHL1-209ENST00000560999 A2MP01023 1474 aa19.89■□□□□ 0.77
CSHL1-209ENST00000560999 CLTCQ00610 1675 aaKnown RBP19.88■□□□□ 0.77
CSHL1-209ENST00000560999 UHRF1BP1Q6BDS2 1440 aa19.87■□□□□ 0.77
CSHL1-209ENST00000560999 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
CSHL1-209ENST00000560999 ITGAEP38570 1179 aa19.87■□□□□ 0.77
CSHL1-209ENST00000560999 ADGBQ8N7X0 1667 aa19.86■□□□□ 0.77
CSHL1-209ENST00000560999 ARHGEF5Q12774 1597 aa19.86■□□□□ 0.77
CSHL1-209ENST00000560999 STRCQ7RTU9 1775 aa19.86■□□□□ 0.77
CSHL1-209ENST00000560999 DAPK1P53355 1430 aa19.85■□□□□ 0.77
CSHL1-209ENST00000560999 MROH2AA6NES4 1674 aa19.85■□□□□ 0.77
CSHL1-209ENST00000560999 CROCC2H7BZ55 1655 aa19.85■□□□□ 0.77
CSHL1-209ENST00000560999 ABCC5O15440 1437 aa19.84■□□□□ 0.77
CSHL1-209ENST00000560999 PTPRKQ15262 1439 aa19.84■□□□□ 0.77
CSHL1-209ENST00000560999 CNTLNQ9NXG0 1405 aa19.83■□□□□ 0.77
CSHL1-209ENST00000560999 CCDC141Q6ZP82 1450 aa19.82■□□□□ 0.76
CSHL1-209ENST00000560999 RSPH4AQ5TD94 716 aa19.8■□□□□ 0.76
CSHL1-209ENST00000560999 GGT6Q6P531 493 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms