RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 MAP3K1Q13233 1512 aa24.61■■□□□ 1.53
RABGGTA-219ENST00000560871 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
RABGGTA-219ENST00000560871 PREX2Q70Z35 1606 aa24.6■■□□□ 1.53
RABGGTA-219ENST00000560871 CDC42BPAQ5VT25 1732 aa24.56■■□□□ 1.52
RABGGTA-219ENST00000560871 CDC42BPBQ9Y5S2 1711 aa24.56■■□□□ 1.52
RABGGTA-219ENST00000560871 ZMYM4Q5VZL5 1548 aa24.56■■□□□ 1.52
RABGGTA-219ENST00000560871 EFCAB2Q5VUJ9 269 aa24.55■■□□□ 1.52
RABGGTA-219ENST00000560871 LRRC9Q6ZRR7 1453 aa24.54■■□□□ 1.52
RABGGTA-219ENST00000560871 ARHGAP5Q13017 1502 aa24.54■■□□□ 1.52
RABGGTA-219ENST00000560871 ARHGEF40Q8TER5 1519 aa24.54■■□□□ 1.52
RABGGTA-219ENST00000560871 SCAPERQ9BY12 1400 aa24.53■■□□□ 1.52
RABGGTA-219ENST00000560871 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
RABGGTA-219ENST00000560871 ADAMTSL3P82987 1691 aa24.5■■□□□ 1.51
RABGGTA-219ENST00000560871 POGZQ7Z3K3 1410 aa24.5■■□□□ 1.51
RABGGTA-219ENST00000560871 SUPT6HQ7KZ85 1726 aaKnown RBP24.49■■□□□ 1.51
RABGGTA-219ENST00000560871 MAGI2Q86UL8 1455 aa24.49■■□□□ 1.51
RABGGTA-219ENST00000560871 BCORL1Q5H9F3 1711 aa24.49■■□□□ 1.51
RABGGTA-219ENST00000560871 ZFYVE16Q7Z3T8 1539 aa24.47■■□□□ 1.51
RABGGTA-219ENST00000560871 NCOA2Q15596 1464 aa24.47■■□□□ 1.51
RABGGTA-219ENST00000560871 ABCC1P33527 1531 aa24.45■■□□□ 1.51
RABGGTA-219ENST00000560871 YEATS2Q9ULM3 1422 aa24.44■■□□□ 1.5
RABGGTA-219ENST00000560871 ITSN2Q9NZM3 1697 aa24.44■■□□□ 1.5
RABGGTA-219ENST00000560871 KANK4Q5T7N3 995 aaPredicted RBP24.44■■□□□ 1.5
RABGGTA-219ENST00000560871 CCNB3Q8WWL7 1395 aa24.43■■□□□ 1.5
RABGGTA-219ENST00000560871 SAMD9LQ8IVG5 1584 aa24.43■■□□□ 1.5
RABGGTA-219ENST00000560871 SIGLEC1Q9BZZ2 1709 aa24.42■■□□□ 1.5
RABGGTA-219ENST00000560871 ARID4BQ4LE39 1312 aaPredicted RBP24.41■■□□□ 1.5
RABGGTA-219ENST00000560871 ZNF518AQ6AHZ1 1483 aa24.39■■□□□ 1.5
RABGGTA-219ENST00000560871 KDM5CP41229 1560 aa24.39■■□□□ 1.5
RABGGTA-219ENST00000560871 ARHGEF12Q9NZN5 1544 aa24.39■■□□□ 1.49
RABGGTA-219ENST00000560871 MADDQ8WXG6 1647 aa24.38■■□□□ 1.49
RABGGTA-219ENST00000560871 AFAP1Q8N556 730 aa24.36■■□□□ 1.49
RABGGTA-219ENST00000560871 PTPRMP28827 1452 aa24.36■■□□□ 1.49
RABGGTA-219ENST00000560871 ATP10AO60312 1499 aa24.35■■□□□ 1.49
RABGGTA-219ENST00000560871 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
RABGGTA-219ENST00000560871 APLP2Q06481 763 aa24.34■■□□□ 1.49
RABGGTA-219ENST00000560871 HECW2Q9P2P5 1572 aa24.33■■□□□ 1.49
RABGGTA-219ENST00000560871 CFDP1Q9UEE9 299 aaPredicted RBP24.33■■□□□ 1.49
RABGGTA-219ENST00000560871 PLEKHH2Q8IVE3 1493 aa24.32■■□□□ 1.48
RABGGTA-219ENST00000560871 RIMS1Q86UR5 1692 aaKnown RBP24.31■■□□□ 1.48
RABGGTA-219ENST00000560871 KIAA1107Q9UPP5 1409 aa24.31■■□□□ 1.48
RABGGTA-219ENST00000560871 TRAPPC8Q9Y2L5 1435 aa24.31■■□□□ 1.48
RABGGTA-219ENST00000560871 C9orf84Q5VXU9 1444 aa24.3■■□□□ 1.48
RABGGTA-219ENST00000560871 MLH3Q9UHC1 1453 aa24.3■■□□□ 1.48
RABGGTA-219ENST00000560871 DIP2CQ9Y2E4 1556 aa24.28■■□□□ 1.48
RABGGTA-219ENST00000560871 MYOM3Q5VTT5 1437 aa24.27■■□□□ 1.48
RABGGTA-219ENST00000560871 ZNF777Q9ULD5 760 aaPredicted RBP24.27■■□□□ 1.48
RABGGTA-219ENST00000560871 CAMSAP2Q08AD1 1489 aa24.26■■□□□ 1.47
RABGGTA-219ENST00000560871 ABCA6Q8N139 1617 aa24.26■■□□□ 1.47
RABGGTA-219ENST00000560871 FER1L4A9Z1Z3 1794 aa24.25■■□□□ 1.47
RABGGTA-219ENST00000560871 KIDINS220Q9ULH0 1771 aa24.25■■□□□ 1.47
RABGGTA-219ENST00000560871 MBD5Q9P267 1494 aa24.25■■□□□ 1.47
RABGGTA-219ENST00000560871 REREQ9P2R6 1566 aa24.25■■□□□ 1.47
RABGGTA-219ENST00000560871 ZNF644Q9H582 1327 aaPredicted RBP24.24■■□□□ 1.47
RABGGTA-219ENST00000560871 MIA2Q96PC5 1412 aa24.24■■□□□ 1.47
RABGGTA-219ENST00000560871 MYT1LQ9UL68 1186 aa24.23■■□□□ 1.47
RABGGTA-219ENST00000560871 MLECQ14165 292 aa24.21■■□□□ 1.47
RABGGTA-219ENST00000560871 INO80Q9ULG1 1556 aaPredicted RBP24.2■■□□□ 1.46
RABGGTA-219ENST00000560871 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.46
RABGGTA-219ENST00000560871 ARHGEF5Q12774 1597 aa24.17■■□□□ 1.46
RABGGTA-219ENST00000560871 AGLP35573 1532 aa24.16■■□□□ 1.46
RABGGTA-219ENST00000560871 CCDC141Q6ZP82 1450 aa24.16■■□□□ 1.46
RABGGTA-219ENST00000560871 FGD6Q6ZV73 1430 aa24.15■■□□□ 1.46
RABGGTA-219ENST00000560871 ATP7AQ04656 1500 aa24.15■■□□□ 1.46
RABGGTA-219ENST00000560871 PTPN23Q9H3S7 1636 aa24.14■■□□□ 1.46
RABGGTA-219ENST00000560871 TCOF1Q13428 1488 aaKnown RBP24.13■■□□□ 1.45
RABGGTA-219ENST00000560871 SPAG9O60271 1321 aaKnown RBP24.12■■□□□ 1.45
RABGGTA-219ENST00000560871 LMTK3Q96Q04 1460 aa24.09■■□□□ 1.45
RABGGTA-219ENST00000560871 RTEL1-TNFRSF6BF6WH68 1400 aa24.08■■□□□ 1.44
RABGGTA-219ENST00000560871 PLPPR3Q6T4P5 718 aa24.07■■□□□ 1.44
RABGGTA-219ENST00000560871 MAST1Q9Y2H9 1570 aa24.07■■□□□ 1.44
RABGGTA-219ENST00000560871 PLXNC1O60486 1568 aa24.06■■□□□ 1.44
RABGGTA-219ENST00000560871 RSPH4AQ5TD94 716 aa24.05■■□□□ 1.44
RABGGTA-219ENST00000560871 CROCC2H7BZ55 1655 aa24.04■■□□□ 1.44
RABGGTA-219ENST00000560871 DNMT1P26358 1616 aaKnown RBP24.03■■□□□ 1.44
RABGGTA-219ENST00000560871 ADGBQ8N7X0 1667 aa24.03■■□□□ 1.44
RABGGTA-219ENST00000560871 CEBPAP49715 358 aaPredicted RBP24.01■■□□□ 1.43
RABGGTA-219ENST00000560871 C3P01024 1663 aa24.01■■□□□ 1.43
RABGGTA-219ENST00000560871 A2MP01023 1474 aa24■■□□□ 1.43
RABGGTA-219ENST00000560871 SHANK2Q9UPX8 1470 aa24■■□□□ 1.43
RABGGTA-219ENST00000560871 ABCC5O15440 1437 aa24■■□□□ 1.43
RABGGTA-219ENST00000560871 PREX1Q8TCU6 1659 aa23.99■■□□□ 1.43
RABGGTA-219ENST00000560871 PPARGC1BQ86YN6 1023 aaKnown RBP23.99■■□□□ 1.43
RABGGTA-219ENST00000560871 DAPK1P53355 1430 aa23.98■■□□□ 1.43
RABGGTA-219ENST00000560871 SETD1BQ9UPS6 1966 aaKnown RBP23.97■■□□□ 1.43
RABGGTA-219ENST00000560871 MROH2AA6NES4 1674 aa23.95■■□□□ 1.43
RABGGTA-219ENST00000560871 ESF1Q9H501 851 aaKnown RBP23.95■■□□□ 1.42
RABGGTA-219ENST00000560871 CNTLNQ9NXG0 1405 aa23.94■■□□□ 1.42
RABGGTA-219ENST00000560871 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
RABGGTA-219ENST00000560871 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
RABGGTA-219ENST00000560871 HSPA2P54652 639 aa23.93■■□□□ 1.42
RABGGTA-219ENST00000560871 DHX29Q7Z478 1369 aaKnown RBP23.91■■□□□ 1.42
RABGGTA-219ENST00000560871 CLTCQ00610 1675 aaKnown RBP23.89■■□□□ 1.42
RABGGTA-219ENST00000560871 RRBP1Q9P2E9 1410 aaKnown RBP23.89■■□□□ 1.41
RABGGTA-219ENST00000560871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.88■■□□□ 1.41
RABGGTA-219ENST00000560871 FAM50AQ14320 339 aaKnown RBP23.87■■□□□ 1.41
RABGGTA-219ENST00000560871 ADGRL2O95490 1459 aa23.87■■□□□ 1.41
RABGGTA-219ENST00000560871 UHRF1BP1Q6BDS2 1440 aa23.85■■□□□ 1.41
RABGGTA-219ENST00000560871 GGT6Q6P531 493 aa23.85■■□□□ 1.41
RABGGTA-219ENST00000560871 ZMYM3Q14202 1370 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms