RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
TRPM1-212ENST00000560801 DCAF11Q8TEB1 546 aa13.25□□□□□ -0.29
TRPM1-212ENST00000560801 TXNDC2Q86VQ3 553 aa13.24□□□□□ -0.29
TRPM1-212ENST00000560801 TEX14Q8IWB6 1497 aa13.24□□□□□ -0.29
TRPM1-212ENST00000560801 SOX12O15370 315 aa13.24□□□□□ -0.29
TRPM1-212ENST00000560801 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRPM1-212ENST00000560801 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
TRPM1-212ENST00000560801 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
TRPM1-212ENST00000560801 CDCA8Q53HL2 280 aa13.23□□□□□ -0.29
TRPM1-212ENST00000560801 PPM1GO15355 546 aaPredicted RBP13.22□□□□□ -0.29
TRPM1-212ENST00000560801 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
TRPM1-212ENST00000560801 IQGAP2Q13576 1575 aa13.22□□□□□ -0.29
TRPM1-212ENST00000560801 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.29
TRPM1-212ENST00000560801 VGFO15240 615 aaPredicted RBP13.2□□□□□ -0.3
TRPM1-212ENST00000560801 ZNF644Q9H582 1327 aaPredicted RBP13.2□□□□□ -0.3
TRPM1-212ENST00000560801 CARD11Q9BXL7 1154 aa13.19□□□□□ -0.3
TRPM1-212ENST00000560801 ASXL2Q76L83 1435 aa13.19□□□□□ -0.3
TRPM1-212ENST00000560801 CEBPAP49715 358 aaPredicted RBP13.18□□□□□ -0.3
TRPM1-212ENST00000560801 ARXQ96QS3 562 aa13.18□□□□□ -0.3
TRPM1-212ENST00000560801 AKNAQ7Z591 1439 aa13.17□□□□□ -0.3
TRPM1-212ENST00000560801 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
TRPM1-212ENST00000560801 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
TRPM1-212ENST00000560801 TROQ12816 1431 aaPredicted RBP13.15□□□□□ -0.3
TRPM1-212ENST00000560801 NPHP1O15259 732 aa13.14□□□□□ -0.31
TRPM1-212ENST00000560801 FOXD1Q16676 465 aa13.14□□□□□ -0.31
TRPM1-212ENST00000560801 PLEKHH2Q8IVE3 1493 aa13.13□□□□□ -0.31
TRPM1-212ENST00000560801 MYOM3Q5VTT5 1437 aa13.13□□□□□ -0.31
TRPM1-212ENST00000560801 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
TRPM1-212ENST00000560801 KIF15Q9NS87 1388 aa13.13□□□□□ -0.31
TRPM1-212ENST00000560801 CUL7Q14999 1698 aa13.11□□□□□ -0.31
TRPM1-212ENST00000560801 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
TRPM1-212ENST00000560801 ANP32CO43423 234 aa13.11□□□□□ -0.31
TRPM1-212ENST00000560801 ADGRL1O94910 1474 aa13.11□□□□□ -0.31
TRPM1-212ENST00000560801 NEFLP07196 543 aa13.11□□□□□ -0.31
TRPM1-212ENST00000560801 HSPA2P54652 639 aa13.1□□□□□ -0.31
TRPM1-212ENST00000560801 YTHDC1Q96MU7 727 aaKnown RBP13.1□□□□□ -0.31
TRPM1-212ENST00000560801 PRXQ9BXM0 1461 aa13.1□□□□□ -0.31
TRPM1-212ENST00000560801 CASKIN1Q8WXD9 1431 aa13.1□□□□□ -0.31
TRPM1-212ENST00000560801 EVA1CP58658 441 aa13.1□□□□□ -0.31
TRPM1-212ENST00000560801 MPHOSPH9Q99550 1183 aa13.1□□□□□ -0.31
TRPM1-212ENST00000560801 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
TRPM1-212ENST00000560801 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
TRPM1-212ENST00000560801 PHLDB1Q86UU1 1377 aa13.09□□□□□ -0.31
TRPM1-212ENST00000560801 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRPM1-212ENST00000560801 ARHGEF11O15085 1522 aa13.09□□□□□ -0.31
TRPM1-212ENST00000560801 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
TRPM1-212ENST00000560801 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
TRPM1-212ENST00000560801 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.32
TRPM1-212ENST00000560801 EFCAB5A4FU69 1503 aa13.08□□□□□ -0.32
TRPM1-212ENST00000560801 PSME1Q06323 249 aa13.07□□□□□ -0.32
TRPM1-212ENST00000560801 TOM1O60784 492 aa13.07□□□□□ -0.32
TRPM1-212ENST00000560801 SLC26A8Q96RN1 970 aa13.06□□□□□ -0.32
TRPM1-212ENST00000560801 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
TRPM1-212ENST00000560801 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
TRPM1-212ENST00000560801 KNSTRNQ9Y448 316 aa13.06□□□□□ -0.32
TRPM1-212ENST00000560801 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
TRPM1-212ENST00000560801 TRAK1Q9UPV9 953 aa13.05□□□□□ -0.32
TRPM1-212ENST00000560801 FANCAO15360 1455 aa13.05□□□□□ -0.32
TRPM1-212ENST00000560801 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
TRPM1-212ENST00000560801 SLC52A1Q9NWF4 448 aa13.05□□□□□ -0.32
TRPM1-212ENST00000560801 WDR7Q9Y4E6 1490 aa13.03□□□□□ -0.32
TRPM1-212ENST00000560801 NUP160Q12769 1436 aa13.03□□□□□ -0.32
TRPM1-212ENST00000560801 CANXP27824 592 aaKnown RBP13.02□□□□□ -0.33
TRPM1-212ENST00000560801 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
TRPM1-212ENST00000560801 CCDC144AA2RUR9 1427 aa13.02□□□□□ -0.33
TRPM1-212ENST00000560801 TMF1P82094 1093 aa13.02□□□□□ -0.33
TRPM1-212ENST00000560801 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
TRPM1-212ENST00000560801 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRPM1-212ENST00000560801 SETD5Q9C0A6 1442 aa13□□□□□ -0.33
TRPM1-212ENST00000560801 SIN3AQ96ST3 1273 aa13□□□□□ -0.33
TRPM1-212ENST00000560801 ABCC2Q92887 1545 aa13□□□□□ -0.33
TRPM1-212ENST00000560801 HECW1Q76N89 1606 aa12.99□□□□□ -0.33
TRPM1-212ENST00000560801 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
TRPM1-212ENST00000560801 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
TRPM1-212ENST00000560801 NCOA2Q15596 1464 aa12.98□□□□□ -0.33
TRPM1-212ENST00000560801 FYCO1Q9BQS8 1478 aa12.98□□□□□ -0.33
TRPM1-212ENST00000560801 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
TRPM1-212ENST00000560801 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
TRPM1-212ENST00000560801 TERF2IPQ9NYB0 399 aa12.98□□□□□ -0.33
TRPM1-212ENST00000560801 MINK1Q8N4C8 1332 aaPredicted RBP12.97□□□□□ -0.33
TRPM1-212ENST00000560801 ANKRD50Q9ULJ7 1429 aa12.97□□□□□ -0.33
TRPM1-212ENST00000560801 CENPBP07199 599 aaPredicted RBP12.97□□□□□ -0.33
TRPM1-212ENST00000560801 THOC2Q8NI27 1593 aaKnown RBP12.97□□□□□ -0.33
TRPM1-212ENST00000560801 NUDCQ9Y266 331 aa12.97□□□□□ -0.33
TRPM1-212ENST00000560801 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.33
TRPM1-212ENST00000560801 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
TRPM1-212ENST00000560801 HRCP23327 699 aa12.95□□□□□ -0.34
TRPM1-212ENST00000560801 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
TRPM1-212ENST00000560801 AMPHP49418 695 aa12.94□□□□□ -0.34
TRPM1-212ENST00000560801 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
TRPM1-212ENST00000560801 MSH5O43196 834 aa12.94□□□□□ -0.34
TRPM1-212ENST00000560801 LTV1Q96GA3 475 aaPredicted RBP12.94□□□□□ -0.34
TRPM1-212ENST00000560801 C9orf84Q5VXU9 1444 aa12.93□□□□□ -0.34
TRPM1-212ENST00000560801 KIF21BO75037 1637 aa12.93□□□□□ -0.34
TRPM1-212ENST00000560801 ATP10BO94823 1461 aa12.92□□□□□ -0.34
TRPM1-212ENST00000560801 FGD6Q6ZV73 1430 aa12.92□□□□□ -0.34
TRPM1-212ENST00000560801 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
TRPM1-212ENST00000560801 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
TRPM1-212ENST00000560801 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
TRPM1-212ENST00000560801 U2SURPO15042 1029 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms