RNA–Protein interactions for RNA: ENST00000560783.1

LINS1-209, Transcript of lines homolog 1, humanhuman

TSL 5

Gene LINS1, Length 511 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-209ENST00000560783 SCUBE2Q9NQ36 999 aa10.84□□□□□ -0.67
LINS1-209ENST00000560783 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
LINS1-209ENST00000560783 G3V3G9 751 aa10.79□□□□□ -0.68
LINS1-209ENST00000560783 C3orf67Q6ZVT6 689 aa10.79□□□□□ -0.68
LINS1-209ENST00000560783 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
LINS1-209ENST00000560783 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.79□□□□□ -0.68
LINS1-209ENST00000560783 TMEM92Q6UXU6 159 aa10.77□□□□□ -0.69
LINS1-209ENST00000560783 SPRYD3Q8NCJ5 442 aa10.76□□□□□ -0.69
LINS1-209ENST00000560783 SLAIN1Q8ND83 568 aa10.75□□□□□ -0.69
LINS1-209ENST00000560783 PAXIP1Q6ZW49 1069 aaPredicted RBP10.73□□□□□ -0.69
LINS1-209ENST00000560783 KIF3CO14782 793 aa10.7□□□□□ -0.7
LINS1-209ENST00000560783 CFAP44Q96MT7 982 aa10.7□□□□□ -0.7
LINS1-209ENST00000560783 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
LINS1-209ENST00000560783 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
LINS1-209ENST00000560783 C2orf72A6NCS6 295 aa10.65□□□□□ -0.7
LINS1-209ENST00000560783 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
LINS1-209ENST00000560783 NCKAP5LQ9HCH0 1330 aa10.63□□□□□ -0.71
LINS1-209ENST00000560783 PLCB2Q00722 1185 aa10.63□□□□□ -0.71
LINS1-209ENST00000560783 GPHNQ9NQX3 736 aaPredicted RBP10.62□□□□□ -0.71
LINS1-209ENST00000560783 MYO15BQ96JP2 1530 aa10.61□□□□□ -0.71
LINS1-209ENST00000560783 HOXB3P14651 431 aaPredicted RBP10.6□□□□□ -0.71
LINS1-209ENST00000560783 TMC2Q8TDI7 906 aa10.6□□□□□ -0.71
LINS1-209ENST00000560783 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
LINS1-209ENST00000560783 FOXK1P85037 733 aa10.57□□□□□ -0.72
LINS1-209ENST00000560783 SNPHO15079 494 aa10.56□□□□□ -0.72
LINS1-209ENST00000560783 PDE4AP27815 886 aa10.56□□□□□ -0.72
LINS1-209ENST00000560783 DSG2Q14126 1118 aa10.56□□□□□ -0.72
LINS1-209ENST00000560783 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
LINS1-209ENST00000560783 MFSD10Q14728 455 aa10.55□□□□□ -0.72
LINS1-209ENST00000560783 ST18O60284 1047 aa10.52□□□□□ -0.73
LINS1-209ENST00000560783 PLPP6Q8IY26 295 aa10.52□□□□□ -0.73
LINS1-209ENST00000560783 FAM163AQ96GL9 167 aaPredicted RBP10.52□□□□□ -0.73
LINS1-209ENST00000560783 LARP6Q9BRS8 491 aaKnown RBP10.52□□□□□ -0.73
LINS1-209ENST00000560783 DOK7Q18PE1 504 aa10.5□□□□□ -0.73
LINS1-209ENST00000560783 PPP1R15BQ5SWA1 713 aa10.5□□□□□ -0.73
LINS1-209ENST00000560783 SLC34A2O95436 690 aa10.49□□□□□ -0.73
LINS1-209ENST00000560783 DDX27Q96GQ7 796 aaKnown RBP10.49□□□□□ -0.73
LINS1-209ENST00000560783 ZSWIM6Q9HCJ5 1215 aa10.46□□□□□ -0.73
LINS1-209ENST00000560783 GPR153Q6NV75 609 aa10.45□□□□□ -0.74
LINS1-209ENST00000560783 HOXB1P14653 301 aaPredicted RBP10.44□□□□□ -0.74
LINS1-209ENST00000560783 PTCD2Q8WV60 388 aaKnown RBP10.44□□□□□ -0.74
LINS1-209ENST00000560783 ZNF710Q8N1W2 664 aa10.43□□□□□ -0.74
LINS1-209ENST00000560783 RIMBP2O15034 1052 aa10.42□□□□□ -0.74
LINS1-209ENST00000560783 CAMK2BQ13554 666 aa10.42□□□□□ -0.74
LINS1-209ENST00000560783 OXER1Q8TDS5 423 aa10.41□□□□□ -0.74
LINS1-209ENST00000560783 PCDHGA4Q9Y5G9 962 aa10.41□□□□□ -0.74
LINS1-209ENST00000560783 HAP1P54257 671 aaPredicted RBP10.4□□□□□ -0.74
LINS1-209ENST00000560783 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
LINS1-209ENST00000560783 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.743e-7■■■■□ 19.5
LINS1-209ENST00000560783 EMILIN3Q9NT22 766 aa10.4□□□□□ -0.74
LINS1-209ENST00000560783 KDM4FA0A1W2PPD8 638 aa10.39□□□□□ -0.75
LINS1-209ENST00000560783 THOC2Q8NI27 1593 aaKnown RBP10.39□□□□□ -0.75
LINS1-209ENST00000560783 SCRIBQ14160 1630 aa10.38□□□□□ -0.75
LINS1-209ENST00000560783 MARVELD3Q96A59 401 aa10.38□□□□□ -0.75
LINS1-209ENST00000560783 POTEMA6NI47 508 aa10.35□□□□□ -0.75
LINS1-209ENST00000560783 POTEGQ6S5H5 508 aa10.35□□□□□ -0.75
LINS1-209ENST00000560783 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
LINS1-209ENST00000560783 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINS1-209ENST00000560783 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
LINS1-209ENST00000560783 NUDT7P0C024 238 aa10.33□□□□□ -0.76
LINS1-209ENST00000560783 E2F4Q16254 413 aa10.33□□□□□ -0.76
LINS1-209ENST00000560783 POTEB3A0JP26 581 aa10.32□□□□□ -0.76
LINS1-209ENST00000560783 TBC1D12O60347 775 aa10.32□□□□□ -0.76
LINS1-209ENST00000560783 EMP3P54852 163 aa10.32□□□□□ -0.76
LINS1-209ENST00000560783 POTEBQ6S5H4 581 aa10.32□□□□□ -0.76
LINS1-209ENST00000560783 ARIH1Q9Y4X5 557 aaPredicted RBP10.31□□□□□ -0.76
LINS1-209ENST00000560783 BAZ1AQ9NRL2 1556 aaPredicted RBP10.3□□□□□ -0.76
LINS1-209ENST00000560783 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
LINS1-209ENST00000560783 ZNF316A6NFI3 1004 aaPredicted RBP10.28□□□□□ -0.76
LINS1-209ENST00000560783 ANO8Q9HCE9 1232 aaPredicted RBP10.28□□□□□ -0.76
LINS1-209ENST00000560783 FAM205CA6NFA0 338 aa10.27□□□□□ -0.77
LINS1-209ENST00000560783 DPYSL4O14531 572 aa10.27□□□□□ -0.77
LINS1-209ENST00000560783 MAP3K9P80192 1104 aa10.27□□□□□ -0.77
LINS1-209ENST00000560783 HS3ST6Q96QI5 342 aa10.27□□□□□ -0.77
LINS1-209ENST00000560783 LHX6Q9UPM6 363 aa10.27□□□□□ -0.77
LINS1-209ENST00000560783 EVI5O60447 810 aa10.26□□□□□ -0.77
LINS1-209ENST00000560783 ERBB3P21860 1342 aa10.26□□□□□ -0.77
LINS1-209ENST00000560783 RIMBP3CA6NJZ7 1639 aa10.25□□□□□ -0.77
LINS1-209ENST00000560783 RIMBP3BA6NNM3 1639 aa10.25□□□□□ -0.77
LINS1-209ENST00000560783 RIMBP3Q9UFD9 1639 aa10.25□□□□□ -0.77
LINS1-209ENST00000560783 KCNV2Q8TDN2 545 aa10.25□□□□□ -0.77
LINS1-209ENST00000560783 NESP48681 1621 aa10.25□□□□□ -0.77
LINS1-209ENST00000560783 SMARCA2P51531 1590 aa10.23□□□□□ -0.77
LINS1-209ENST00000560783 VARS2Q5ST30 1063 aaKnown RBP10.23□□□□□ -0.77
LINS1-209ENST00000560783 PDIA6Q15084 440 aa10.21□□□□□ -0.77
LINS1-209ENST00000560783 ARHGEF1Q92888 912 aaKnown RBP10.21□□□□□ -0.77
LINS1-209ENST00000560783 SPDYE16A6NNV3 312 aaPredicted RBP10.18□□□□□ -0.78
LINS1-209ENST00000560783 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
LINS1-209ENST00000560783 ZNF687Q8N1G0 1237 aa10.18□□□□□ -0.78
LINS1-209ENST00000560783 PSDA5PKW4 1024 aaPredicted RBP10.17□□□□□ -0.78
LINS1-209ENST00000560783 PTGER2P43116 358 aa10.17□□□□□ -0.78
LINS1-209ENST00000560783 FOSBP53539 338 aa10.17□□□□□ -0.78
LINS1-209ENST00000560783 P3H3Q8IVL6 736 aa10.17□□□□□ -0.78
LINS1-209ENST00000560783 NCAPD3P42695 1498 aa10.17□□□□□ -0.78
LINS1-209ENST00000560783 PCDH10Q9P2E7 1040 aa10.16□□□□□ -0.78
LINS1-209ENST00000560783 POTEEQ6S8J3 1075 aa10.15□□□□□ -0.78
LINS1-209ENST00000560783 JPH4Q96JJ6 628 aa10.15□□□□□ -0.78
LINS1-209ENST00000560783 ARHGEF11O15085 1522 aa10.14□□□□□ -0.79
LINS1-209ENST00000560783 DCAF1Q9Y4B6 1507 aa10.14□□□□□ -0.79
LINS1-209ENST00000560783 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms