RNA–Protein interactions for RNA: ENST00000560779.5

RMDN3-210, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 3

Gene RMDN3, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-210ENST00000560779 ARHGAP5Q13017 1502 aa21.29■■□□□ 1
RMDN3-210ENST00000560779 ITSN2Q9NZM3 1697 aa21.29■■□□□ 1
RMDN3-210ENST00000560779 FRMPD1Q5SYB0 1578 aa21.27■■□□□ 1
RMDN3-210ENST00000560779 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
RMDN3-210ENST00000560779 ADGRL1O94910 1474 aa21.26■□□□□ 0.99
RMDN3-210ENST00000560779 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
RMDN3-210ENST00000560779 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
RMDN3-210ENST00000560779 GPATCH8Q9UKJ3 1502 aaKnown RBP21.24■□□□□ 0.99
RMDN3-210ENST00000560779 ZMYM4Q5VZL5 1548 aa21.22■□□□□ 0.99
RMDN3-210ENST00000560779 CCNB3Q8WWL7 1395 aa21.22■□□□□ 0.99
RMDN3-210ENST00000560779 SCAPERQ9BY12 1400 aa21.21■□□□□ 0.99
RMDN3-210ENST00000560779 NCOA2Q15596 1464 aa21.2■□□□□ 0.98
RMDN3-210ENST00000560779 ABCC1P33527 1531 aa21.2■□□□□ 0.98
RMDN3-210ENST00000560779 POGZQ7Z3K3 1410 aa21.19■□□□□ 0.98
RMDN3-210ENST00000560779 APLP2Q06481 763 aa21.18■□□□□ 0.98
RMDN3-210ENST00000560779 SAMD9LQ8IVG5 1584 aa21.18■□□□□ 0.98
RMDN3-210ENST00000560779 RAPGEF3O95398 923 aa21.17■□□□□ 0.98
RMDN3-210ENST00000560779 ZNF518AQ6AHZ1 1483 aa21.16■□□□□ 0.98
RMDN3-210ENST00000560779 KDM5CP41229 1560 aa21.15■□□□□ 0.98
RMDN3-210ENST00000560779 ARHGEF40Q8TER5 1519 aa21.15■□□□□ 0.98
RMDN3-210ENST00000560779 MAGI2Q86UL8 1455 aa21.15■□□□□ 0.98
RMDN3-210ENST00000560779 PLEKHH2Q8IVE3 1493 aa21.15■□□□□ 0.98
RMDN3-210ENST00000560779 KANK4Q5T7N3 995 aaPredicted RBP21.12■□□□□ 0.97
RMDN3-210ENST00000560779 CFDP1Q9UEE9 299 aaPredicted RBP21.12■□□□□ 0.97
RMDN3-210ENST00000560779 KIAA1107Q9UPP5 1409 aa21.11■□□□□ 0.97
RMDN3-210ENST00000560779 ZFYVE16Q7Z3T8 1539 aa21.1■□□□□ 0.97
RMDN3-210ENST00000560779 SYCP2Q9BX26 1530 aa21.1■□□□□ 0.97
RMDN3-210ENST00000560779 ARHGEF12Q9NZN5 1544 aa21.1■□□□□ 0.97
RMDN3-210ENST00000560779 HECW2Q9P2P5 1572 aa21.1■□□□□ 0.97
RMDN3-210ENST00000560779 MYOM3Q5VTT5 1437 aa21.05■□□□□ 0.96
RMDN3-210ENST00000560779 TRAPPC8Q9Y2L5 1435 aa21.05■□□□□ 0.96
RMDN3-210ENST00000560779 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
RMDN3-210ENST00000560779 MLH3Q9UHC1 1453 aa21.05■□□□□ 0.96
RMDN3-210ENST00000560779 CAMSAP2Q08AD1 1489 aa21.04■□□□□ 0.96
RMDN3-210ENST00000560779 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
RMDN3-210ENST00000560779 KIDINS220Q9ULH0 1771 aa21.03■□□□□ 0.96
RMDN3-210ENST00000560779 YEATS2Q9ULM3 1422 aa21.02■□□□□ 0.96
RMDN3-210ENST00000560779 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
RMDN3-210ENST00000560779 DIP2CQ9Y2E4 1556 aa21.01■□□□□ 0.95
RMDN3-210ENST00000560779 MBD5Q9P267 1494 aa21.01■□□□□ 0.95
RMDN3-210ENST00000560779 ARHGEF5Q12774 1597 aa21■□□□□ 0.95
RMDN3-210ENST00000560779 REREQ9P2R6 1566 aa21■□□□□ 0.95
RMDN3-210ENST00000560779 INO80Q9ULG1 1556 aaPredicted RBP21■□□□□ 0.95
RMDN3-210ENST00000560779 ABCA6Q8N139 1617 aa21■□□□□ 0.95
RMDN3-210ENST00000560779 ATP10AO60312 1499 aa20.99■□□□□ 0.95
RMDN3-210ENST00000560779 HNRNPMP52272 730 aaKnown RBP eCLIP20.97■□□□□ 0.95
RMDN3-210ENST00000560779 BCORL1Q5H9F3 1711 aa20.97■□□□□ 0.95
RMDN3-210ENST00000560779 ATP7AQ04656 1500 aa20.97■□□□□ 0.95
RMDN3-210ENST00000560779 ZNF644Q9H582 1327 aaPredicted RBP20.97■□□□□ 0.95
RMDN3-210ENST00000560779 C9orf84Q5VXU9 1444 aa20.96■□□□□ 0.95
RMDN3-210ENST00000560779 CCDC141Q6ZP82 1450 aa20.96■□□□□ 0.95
RMDN3-210ENST00000560779 SIGLEC1Q9BZZ2 1709 aa20.96■□□□□ 0.95
RMDN3-210ENST00000560779 RSPH4AQ5TD94 716 aa20.95■□□□□ 0.94
RMDN3-210ENST00000560779 PTPN23Q9H3S7 1636 aa20.95■□□□□ 0.94
RMDN3-210ENST00000560779 ADAMTSL3P82987 1691 aa20.93■□□□□ 0.94
RMDN3-210ENST00000560779 SPAG9O60271 1321 aaKnown RBP20.93■□□□□ 0.94
RMDN3-210ENST00000560779 FGD6Q6ZV73 1430 aa20.93■□□□□ 0.94
RMDN3-210ENST00000560779 ADGBQ8N7X0 1667 aa20.93■□□□□ 0.94
RMDN3-210ENST00000560779 KDM4FA0A1W2PPD8 638 aa20.92■□□□□ 0.94
RMDN3-210ENST00000560779 RTEL1-TNFRSF6BF6WH68 1400 aa20.92■□□□□ 0.94
RMDN3-210ENST00000560779 TCOF1Q13428 1488 aaKnown RBP20.91■□□□□ 0.94
RMDN3-210ENST00000560779 MAST1Q9Y2H9 1570 aa20.9■□□□□ 0.94
RMDN3-210ENST00000560779 MYT1LQ9UL68 1186 aa20.9■□□□□ 0.94
RMDN3-210ENST00000560779 CROCC2H7BZ55 1655 aa20.89■□□□□ 0.94
RMDN3-210ENST00000560779 AGLP35573 1532 aa20.89■□□□□ 0.94
RMDN3-210ENST00000560779 DNMT1P26358 1616 aaKnown RBP20.86■□□□□ 0.93
RMDN3-210ENST00000560779 ARID4BQ4LE39 1312 aaPredicted RBP20.86■□□□□ 0.93
RMDN3-210ENST00000560779 PLXNC1O60486 1568 aa20.86■□□□□ 0.93
RMDN3-210ENST00000560779 MADDQ8WXG6 1647 aa20.85■□□□□ 0.93
RMDN3-210ENST00000560779 FER1L4A9Z1Z3 1794 aa20.85■□□□□ 0.93
RMDN3-210ENST00000560779 SHANK2Q9UPX8 1470 aa20.83■□□□□ 0.93
RMDN3-210ENST00000560779 A2MP01023 1474 aa20.82■□□□□ 0.92
RMDN3-210ENST00000560779 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
RMDN3-210ENST00000560779 TSPY4P0CV99 314 aa20.81■□□□□ 0.92
RMDN3-210ENST00000560779 TSPY10P0CW01 314 aa20.81■□□□□ 0.92
RMDN3-210ENST00000560779 RIMS1Q86UR5 1692 aaKnown RBP20.8■□□□□ 0.92
RMDN3-210ENST00000560779 DAPK1P53355 1430 aa20.78■□□□□ 0.92
RMDN3-210ENST00000560779 ABCC5O15440 1437 aa20.77■□□□□ 0.91
RMDN3-210ENST00000560779 PTPRMP28827 1452 aa20.75■□□□□ 0.91
RMDN3-210ENST00000560779 DHX29Q7Z478 1369 aaKnown RBP20.74■□□□□ 0.91
RMDN3-210ENST00000560779 EIF2AK4Q9P2K8 1649 aaKnown RBP20.74■□□□□ 0.91
RMDN3-210ENST00000560779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.91
RMDN3-210ENST00000560779 MROH2AA6NES4 1674 aa20.7■□□□□ 0.91
RMDN3-210ENST00000560779 DUOX2Q9NRD8 1548 aa20.7■□□□□ 0.9
RMDN3-210ENST00000560779 MLECQ14165 292 aa20.7■□□□□ 0.9
RMDN3-210ENST00000560779 PPARGC1BQ86YN6 1023 aaKnown RBP20.7■□□□□ 0.9
RMDN3-210ENST00000560779 ADGRL2O95490 1459 aa20.69■□□□□ 0.9
RMDN3-210ENST00000560779 FAM50AQ14320 339 aaKnown RBP20.69■□□□□ 0.9
RMDN3-210ENST00000560779 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
RMDN3-210ENST00000560779 CNTLNQ9NXG0 1405 aa20.68■□□□□ 0.9
RMDN3-210ENST00000560779 RRBP1Q9P2E9 1410 aaKnown RBP20.68■□□□□ 0.9
RMDN3-210ENST00000560779 RNF17Q9BXT8 1623 aaKnown RBP20.67■□□□□ 0.9
RMDN3-210ENST00000560779 ANKRD30AQ9BXX3 1397 aa20.65■□□□□ 0.9
RMDN3-210ENST00000560779 KIF15Q9NS87 1388 aa20.65■□□□□ 0.9
RMDN3-210ENST00000560779 C3P01024 1663 aa20.64■□□□□ 0.9
RMDN3-210ENST00000560779 ERBINQ96RT1 1412 aa20.64■□□□□ 0.89
RMDN3-210ENST00000560779 PPP6R1Q9UPN7 881 aa20.64■□□□□ 0.89
RMDN3-210ENST00000560779 SETD1BQ9UPS6 1966 aaKnown RBP20.64■□□□□ 0.89
RMDN3-210ENST00000560779 CLTCQ00610 1675 aaKnown RBP20.64■□□□□ 0.89
RMDN3-210ENST00000560779 NCOA1Q15788 1441 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms