RNA–Protein interactions for RNA: ENST00000560762.5

NIPA2-209, Transcript of NIPA magnesium transporter 2, human

TSL 5

Gene NIPA2, Length 534 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIPA2-209	ENST00000560762	FRMPD1	Q5SYB0	1578 aa		34.66	■■■■□ 3.14
NIPA2-209	ENST00000560762	DENND4B	O75064	1496 aa	Predicted RBP	34.65	■■■■□ 3.14
NIPA2-209	ENST00000560762	ADGRL1	O94910	1474 aa		34.65	■■■■□ 3.14
NIPA2-209	ENST00000560762	CDC42BPA	Q5VT25	1732 aa		34.64	■■■■□ 3.14
NIPA2-209	ENST00000560762	GPATCH8	Q9UKJ3	1502 aa	Known RBP	34.62	■■■■□ 3.13
NIPA2-209	ENST00000560762	LRRC9	Q6ZRR7	1453 aa		34.6	■■■■□ 3.13
NIPA2-209	ENST00000560762	SCAPER	Q9BY12	1400 aa		34.6	■■■■□ 3.13
NIPA2-209	ENST00000560762	RICTOR	Q6R327	1708 aa		34.59	■■■■□ 3.13
NIPA2-209	ENST00000560762	CCNB3	Q8WWL7	1395 aa		34.58	■■■■□ 3.13
NIPA2-209	ENST00000560762	POGZ	Q7Z3K3	1410 aa		34.55	■■■■□ 3.12
NIPA2-209	ENST00000560762	SUPT6H	Q7KZ85	1726 aa	Known RBP	34.53	■■■■□ 3.12
NIPA2-209	ENST00000560762	KANK4	Q5T7N3	995 aa	Predicted RBP	34.53	■■■■□ 3.12
NIPA2-209	ENST00000560762	NCOA2	Q15596	1464 aa		34.52	■■■■□ 3.12
NIPA2-209	ENST00000560762	ZMYM4	Q5VZL5	1548 aa		34.5	■■■■□ 3.11
NIPA2-209	ENST00000560762	APLP2	Q06481	763 aa		34.49	■■■■□ 3.11
NIPA2-209	ENST00000560762	ABCC1	P33527	1531 aa		34.49	■■■■□ 3.11
NIPA2-209	ENST00000560762	CFDP1	Q9UEE9	299 aa	Predicted RBP	34.48	■■■■□ 3.11
NIPA2-209	ENST00000560762	ARHGEF12	Q9NZN5	1544 aa		34.45	■■■■□ 3.11
NIPA2-209	ENST00000560762	SAMD9L	Q8IVG5	1584 aa		34.45	■■■■□ 3.11
NIPA2-209	ENST00000560762	ITSN2	Q9NZM3	1697 aa		34.44	■■■■□ 3.1
NIPA2-209	ENST00000560762	ZNF777	Q9ULD5	760 aa	Predicted RBP	34.44	■■■■□ 3.1
NIPA2-209	ENST00000560762	ZNF518A	Q6AHZ1	1483 aa		34.44	■■■■□ 3.1
NIPA2-209	ENST00000560762	MAGI2	Q86UL8	1455 aa		34.41	■■■■□ 3.1
NIPA2-209	ENST00000560762	KDM5C	P41229	1560 aa		34.4	■■■■□ 3.1
NIPA2-209	ENST00000560762	ARHGEF40	Q8TER5	1519 aa		34.4	■■■■□ 3.1
NIPA2-209	ENST00000560762	AFAP1	Q8N556	730 aa		34.39	■■■■□ 3.1
NIPA2-209	ENST00000560762	TRAPPC8	Q9Y2L5	1435 aa		34.38	■■■■□ 3.09
NIPA2-209	ENST00000560762	PLEKHH2	Q8IVE3	1493 aa		34.37	■■■■□ 3.09
NIPA2-209	ENST00000560762	KIAA1107	Q9UPP5	1409 aa		34.37	■■■■□ 3.09
NIPA2-209	ENST00000560762	ZFYVE16	Q7Z3T8	1539 aa		34.36	■■■■□ 3.09
NIPA2-209	ENST00000560762	YEATS2	Q9ULM3	1422 aa		34.36	■■■■□ 3.09
NIPA2-209	ENST00000560762	SYCP2	Q9BX26	1530 aa		34.35	■■■■□ 3.09
NIPA2-209	ENST00000560762	ZNF644	Q9H582	1327 aa	Predicted RBP	34.32	■■■■□ 3.09
NIPA2-209	ENST00000560762	KDM4F	A0A1W2PPD8	638 aa		34.31	■■■■□ 3.08
NIPA2-209	ENST00000560762	HNRNPM	P52272	730 aa	Known RBP eCLIP	34.3	■■■■□ 3.08
NIPA2-209	ENST00000560762	HECW2	Q9P2P5	1572 aa		34.28	■■■■□ 3.08
NIPA2-209	ENST00000560762	MLH3	Q9UHC1	1453 aa		34.28	■■■■□ 3.08
NIPA2-209	ENST00000560762	MYOM3	Q5VTT5	1437 aa		34.26	■■■■□ 3.07
NIPA2-209	ENST00000560762	CAMSAP2	Q08AD1	1489 aa		34.24	■■■■□ 3.07
NIPA2-209	ENST00000560762	MBD5	Q9P267	1494 aa		34.24	■■■■□ 3.07
NIPA2-209	ENST00000560762	ATP10A	O60312	1499 aa		34.21	■■■■□ 3.07
NIPA2-209	ENST00000560762	MIA2	Q96PC5	1412 aa		34.21	■■■■□ 3.07
NIPA2-209	ENST00000560762	MYT1L	Q9UL68	1186 aa		34.18	■■■■□ 3.06
NIPA2-209	ENST00000560762	KIDINS220	Q9ULH0	1771 aa		34.17	■■■■□ 3.06
NIPA2-209	ENST00000560762	DIP2C	Q9Y2E4	1556 aa		34.17	■■■■□ 3.06
NIPA2-209	ENST00000560762	C9orf84	Q5VXU9	1444 aa		34.16	■■■■□ 3.06
NIPA2-209	ENST00000560762	SPAG9	O60271	1321 aa	Known RBP	34.16	■■■■□ 3.06
NIPA2-209	ENST00000560762	SIGLEC1	Q9BZZ2	1709 aa		34.16	■■■■□ 3.06
NIPA2-209	ENST00000560762	ABCA6	Q8N139	1617 aa		34.15	■■■■□ 3.06
NIPA2-209	ENST00000560762	ARID4B	Q4LE39	1312 aa	Predicted RBP	34.14	■■■■□ 3.06
NIPA2-209	ENST00000560762	AEBP2	Q6ZN18	517 aa	Predicted RBP	34.14	■■■■□ 3.06
NIPA2-209	ENST00000560762	INO80	Q9ULG1	1556 aa	Predicted RBP	34.11	■■■■□ 3.05
NIPA2-209	ENST00000560762	ATP7A	Q04656	1500 aa		34.1	■■■■□ 3.05
NIPA2-209	ENST00000560762	CCDC141	Q6ZP82	1450 aa		34.1	■■■■□ 3.05
NIPA2-209	ENST00000560762	RERE	Q9P2R6	1566 aa		34.1	■■■■□ 3.05
NIPA2-209	ENST00000560762	RSPH4A	Q5TD94	716 aa		34.09	■■■■□ 3.05
NIPA2-209	ENST00000560762	ARHGEF5	Q12774	1597 aa		34.09	■■■■□ 3.05
NIPA2-209	ENST00000560762	BCORL1	Q5H9F3	1711 aa		34.09	■■■■□ 3.05
NIPA2-209	ENST00000560762	FGD6	Q6ZV73	1430 aa		34.06	■■■■□ 3.04
NIPA2-209	ENST00000560762	ADAMTSL3	P82987	1691 aa		34.06	■■■■□ 3.04
NIPA2-209	ENST00000560762	RTEL1-TNFRSF6B	F6WH68	1400 aa		34.04	■■■■□ 3.04
NIPA2-209	ENST00000560762	PTPN23	Q9H3S7	1636 aa		34.03	■■■■□ 3.04
NIPA2-209	ENST00000560762	TCOF1	Q13428	1488 aa	Known RBP	34	■■■■□ 3.03
NIPA2-209	ENST00000560762	AGL	P35573	1532 aa		33.98	■■■■□ 3.03
NIPA2-209	ENST00000560762	MADD	Q8WXG6	1647 aa		33.94	■■■■□ 3.02
NIPA2-209	ENST00000560762	TSPY4	P0CV99	314 aa		33.94	■■■■□ 3.02
NIPA2-209	ENST00000560762	TSPY10	P0CW01	314 aa		33.94	■■■■□ 3.02
NIPA2-209	ENST00000560762	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.94	■■■■□ 3.02
NIPA2-209	ENST00000560762	MLEC	Q14165	292 aa		33.93	■■■■□ 3.02
NIPA2-209	ENST00000560762	A2M	P01023	1474 aa		33.93	■■■■□ 3.02
NIPA2-209	ENST00000560762	PLXNC1	O60486	1568 aa		33.92	■■■■□ 3.02
NIPA2-209	ENST00000560762	MAST1	Q9Y2H9	1570 aa		33.91	■■■■□ 3.02
NIPA2-209	ENST00000560762	ADGB	Q8N7X0	1667 aa		33.9	■■■■□ 3.02
NIPA2-209	ENST00000560762	ABCC5	O15440	1437 aa		33.88	■■■■□ 3.01
NIPA2-209	ENST00000560762	PTPRM	P28827	1452 aa		33.87	■■■■□ 3.01
NIPA2-209	ENST00000560762	DNMT1	P26358	1616 aa	Known RBP	33.85	■■■■□ 3.01
NIPA2-209	ENST00000560762	DAPK1	P53355	1430 aa		33.84	■■■■□ 3.01
NIPA2-209	ENST00000560762	SHANK2	Q9UPX8	1470 aa		33.83	■■■■□ 3.01
NIPA2-209	ENST00000560762	CROCC2	H7BZ55	1655 aa		33.83	■■■■□ 3.01
NIPA2-209	ENST00000560762	RIMS1	Q86UR5	1692 aa	Known RBP	33.83	■■■■□ 3.01
NIPA2-209	ENST00000560762	DHX29	Q7Z478	1369 aa	Known RBP	33.83	■■■■□ 3.01
NIPA2-209	ENST00000560762	FER1L4	A9Z1Z3	1794 aa		33.82	■■■■□ 3
NIPA2-209	ENST00000560762	FAM50A	Q14320	339 aa	Known RBP	33.8	■■■■□ 3
NIPA2-209	ENST00000560762	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.67	■■■□□ 2.98
NIPA2-209	ENST00000560762	KIF3B	O15066	747 aa		33.66	■■■□□ 2.98
NIPA2-209	ENST00000560762	GGT6	Q6P531	493 aa		33.66	■■■□□ 2.98
NIPA2-209	ENST00000560762	DUOX2	Q9NRD8	1548 aa		33.66	■■■□□ 2.98
NIPA2-209	ENST00000560762	KIF15	Q9NS87	1388 aa		33.66	■■■□□ 2.98
NIPA2-209	ENST00000560762	CNTLN	Q9NXG0	1405 aa		33.65	■■■□□ 2.98
NIPA2-209	ENST00000560762	CHIC2	Q9UKJ5	165 aa		33.65	■■■□□ 2.98
NIPA2-209	ENST00000560762	ESF1	Q9H501	851 aa	Known RBP	33.64	■■■□□ 2.98
NIPA2-209	ENST00000560762	ANKRD30A	Q9BXX3	1397 aa		33.63	■■■□□ 2.97
NIPA2-209	ENST00000560762	RRP7BP	Q9NSQ0	103 aa		33.63	■■■□□ 2.97
NIPA2-209	ENST00000560762	ADGRL2	O95490	1459 aa		33.63	■■■□□ 2.97
NIPA2-209	ENST00000560762	NCOA1	Q15788	1441 aa		33.62	■■■□□ 2.97
NIPA2-209	ENST00000560762	RRBP1	Q9P2E9	1410 aa	Known RBP	33.62	■■■□□ 2.97
NIPA2-209	ENST00000560762	PPP6R1	Q9UPN7	881 aa		33.62	■■■□□ 2.97
NIPA2-209	ENST00000560762	PTPRK	Q15262	1439 aa		33.61	■■■□□ 2.97
NIPA2-209	ENST00000560762	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.6	■■■□□ 2.97
NIPA2-209	ENST00000560762	PLPPR3	Q6T4P5	718 aa		33.59	■■■□□ 2.97

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms