RNA–Protein interactions for RNA: ENST00000560744.1

AP001007.3-201, humanhuman

TSL 5 BASIC

Gene AP001007.3, Length 356 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.3-201ENST00000560744 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
AP001007.3-201ENST00000560744 ARAP3Q8WWN8 1544 aa9.63□□□□□ -0.87
AP001007.3-201ENST00000560744 CAPN15O75808 1086 aa9.63□□□□□ -0.87
AP001007.3-201ENST00000560744 PHLDB1Q86UU1 1377 aa9.63□□□□□ -0.87
AP001007.3-201ENST00000560744 NEO1Q92859 1461 aa9.61□□□□□ -0.87
AP001007.3-201ENST00000560744 HECW1Q76N89 1606 aa9.61□□□□□ -0.87
AP001007.3-201ENST00000560744 RAPGEF3O95398 923 aa9.61□□□□□ -0.87
AP001007.3-201ENST00000560744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.61□□□□□ -0.87
AP001007.3-201ENST00000560744 CLIP1P30622 1438 aa9.6□□□□□ -0.87
AP001007.3-201ENST00000560744 CDK11AQ9UQ88 783 aaPredicted RBP9.6□□□□□ -0.87
AP001007.3-201ENST00000560744 ADGRL1O94910 1474 aa9.59□□□□□ -0.87
AP001007.3-201ENST00000560744 TTC37Q6PGP7 1564 aa9.59□□□□□ -0.87
AP001007.3-201ENST00000560744 CASKIN1Q8WXD9 1431 aa9.58□□□□□ -0.88
AP001007.3-201ENST00000560744 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
AP001007.3-201ENST00000560744 TROQ12816 1431 aaPredicted RBP9.57□□□□□ -0.88
AP001007.3-201ENST00000560744 AKNAQ7Z591 1439 aa9.57□□□□□ -0.88
AP001007.3-201ENST00000560744 FANCAO15360 1455 aa9.57□□□□□ -0.88
AP001007.3-201ENST00000560744 PCF11O94913 1555 aaKnown RBP9.57□□□□□ -0.88
AP001007.3-201ENST00000560744 PLCH2O75038 1416 aa9.56□□□□□ -0.88
AP001007.3-201ENST00000560744 LRRIQ1Q96JM4 1722 aa9.56□□□□□ -0.88
AP001007.3-201ENST00000560744 FRMPD1Q5SYB0 1578 aa9.55□□□□□ -0.88
AP001007.3-201ENST00000560744 DENND4BO75064 1496 aaPredicted RBP9.55□□□□□ -0.88
AP001007.3-201ENST00000560744 ZBTB22O15209 634 aa9.55□□□□□ -0.88
AP001007.3-201ENST00000560744 KIF14Q15058 1648 aa9.55□□□□□ -0.88
AP001007.3-201ENST00000560744 LOC105371045A0A1W2PR82 267 aa9.54□□□□□ -0.88
AP001007.3-201ENST00000560744 HRCP23327 699 aa9.54□□□□□ -0.88
AP001007.3-201ENST00000560744 EFCAB2Q5VUJ9 269 aa9.54□□□□□ -0.88
AP001007.3-201ENST00000560744 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
AP001007.3-201ENST00000560744 CCDC18Q5T9S5 1454 aa9.53□□□□□ -0.88
AP001007.3-201ENST00000560744 FYCO1Q9BQS8 1478 aa9.53□□□□□ -0.88
AP001007.3-201ENST00000560744 SCAPERQ9BY12 1400 aa9.53□□□□□ -0.88
AP001007.3-201ENST00000560744 CFAP74Q9C0B2 1584 aa9.53□□□□□ -0.88
AP001007.3-201ENST00000560744 CEP162Q5TB80 1403 aa9.52□□□□□ -0.89
AP001007.3-201ENST00000560744 RICTORQ6R327 1708 aa9.51□□□□□ -0.89
AP001007.3-201ENST00000560744 MYO5CQ9NQX4 1742 aa9.51□□□□□ -0.89
AP001007.3-201ENST00000560744 ARHGAP5Q13017 1502 aa9.5□□□□□ -0.89
AP001007.3-201ENST00000560744 ARID4BQ4LE39 1312 aaPredicted RBP9.5□□□□□ -0.89
AP001007.3-201ENST00000560744 POGZQ7Z3K3 1410 aa9.49□□□□□ -0.89
AP001007.3-201ENST00000560744 YEATS2Q9ULM3 1422 aa9.49□□□□□ -0.89
AP001007.3-201ENST00000560744 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
AP001007.3-201ENST00000560744 ZMYM4Q5VZL5 1548 aa9.49□□□□□ -0.89
AP001007.3-201ENST00000560744 ARHGEF40Q8TER5 1519 aa9.48□□□□□ -0.89
AP001007.3-201ENST00000560744 AFAP1Q8N556 730 aa9.48□□□□□ -0.89
AP001007.3-201ENST00000560744 CDC42BPBQ9Y5S2 1711 aa9.48□□□□□ -0.89
AP001007.3-201ENST00000560744 ZFYVE16Q7Z3T8 1539 aa9.47□□□□□ -0.89
AP001007.3-201ENST00000560744 MAGI2Q86UL8 1455 aa9.47□□□□□ -0.89
AP001007.3-201ENST00000560744 ADAMTSL3P82987 1691 aa9.46□□□□□ -0.89
AP001007.3-201ENST00000560744 MTUS2Q5JR59 1369 aa9.46□□□□□ -0.9
AP001007.3-201ENST00000560744 PREX2Q70Z35 1606 aa9.45□□□□□ -0.9
AP001007.3-201ENST00000560744 ZNF777Q9ULD5 760 aaPredicted RBP9.45□□□□□ -0.9
AP001007.3-201ENST00000560744 TRAPPC8Q9Y2L5 1435 aa9.45□□□□□ -0.9
AP001007.3-201ENST00000560744 ARHGEF12Q9NZN5 1544 aa9.45□□□□□ -0.9
AP001007.3-201ENST00000560744 GPATCH8Q9UKJ3 1502 aaKnown RBP9.45□□□□□ -0.9
AP001007.3-201ENST00000560744 BCORL1Q5H9F3 1711 aa9.45□□□□□ -0.9
AP001007.3-201ENST00000560744 CDC42BPAQ5VT25 1732 aa9.45□□□□□ -0.9
AP001007.3-201ENST00000560744 MLECQ14165 292 aa9.44□□□□□ -0.9
AP001007.3-201ENST00000560744 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
AP001007.3-201ENST00000560744 ATP10AO60312 1499 aa9.44□□□□□ -0.9
AP001007.3-201ENST00000560744 PTPRMP28827 1452 aa9.44□□□□□ -0.9
AP001007.3-201ENST00000560744 ZNF518AQ6AHZ1 1483 aa9.44□□□□□ -0.9
AP001007.3-201ENST00000560744 SIGLEC1Q9BZZ2 1709 aa9.44□□□□□ -0.9
AP001007.3-201ENST00000560744 ABCC1P33527 1531 aa9.43□□□□□ -0.9
AP001007.3-201ENST00000560744 CCNB3Q8WWL7 1395 aa9.43□□□□□ -0.9
AP001007.3-201ENST00000560744 DSG3P32926 999 aa9.43□□□□□ -0.9
AP001007.3-201ENST00000560744 CFDP1Q9UEE9 299 aaPredicted RBP9.43□□□□□ -0.9
AP001007.3-201ENST00000560744 MADDQ8WXG6 1647 aa9.42□□□□□ -0.9
AP001007.3-201ENST00000560744 KDM5CP41229 1560 aa9.42□□□□□ -0.9
AP001007.3-201ENST00000560744 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
AP001007.3-201ENST00000560744 TRIM26Q12899 539 aaPredicted RBP9.42□□□□□ -0.9
AP001007.3-201ENST00000560744 C9orf84Q5VXU9 1444 aa9.41□□□□□ -0.9
AP001007.3-201ENST00000560744 SAMD9LQ8IVG5 1584 aa9.41□□□□□ -0.9
AP001007.3-201ENST00000560744 HECW2Q9P2P5 1572 aa9.41□□□□□ -0.9
AP001007.3-201ENST00000560744 MLH3Q9UHC1 1453 aa9.4□□□□□ -0.9
AP001007.3-201ENST00000560744 VPS8Q8N3P4 1428 aa9.4□□□□□ -0.9
AP001007.3-201ENST00000560744 ITSN2Q9NZM3 1697 aa9.4□□□□□ -0.9
AP001007.3-201ENST00000560744 PCGF6Q9BYE7 350 aa9.4□□□□□ -0.9
AP001007.3-201ENST00000560744 EHBP1L1Q8N3D4 1523 aa9.4□□□□□ -0.91
AP001007.3-201ENST00000560744 ZNF644Q9H582 1327 aaPredicted RBP9.39□□□□□ -0.91
AP001007.3-201ENST00000560744 DIP2CQ9Y2E4 1556 aa9.39□□□□□ -0.91
AP001007.3-201ENST00000560744 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
AP001007.3-201ENST00000560744 RIMS1Q86UR5 1692 aaKnown RBP9.39□□□□□ -0.91
AP001007.3-201ENST00000560744 TIAM1Q13009 1591 aa9.38□□□□□ -0.91
AP001007.3-201ENST00000560744 SYCP2Q9BX26 1530 aa9.38□□□□□ -0.91
AP001007.3-201ENST00000560744 ABCA6Q8N139 1617 aa9.38□□□□□ -0.91
AP001007.3-201ENST00000560744 SPAG9O60271 1321 aaKnown RBP9.37□□□□□ -0.91
AP001007.3-201ENST00000560744 NCOA2Q15596 1464 aa9.37□□□□□ -0.91
AP001007.3-201ENST00000560744 PLEKHH2Q8IVE3 1493 aa9.37□□□□□ -0.91
AP001007.3-201ENST00000560744 KIDINS220Q9ULH0 1771 aa9.37□□□□□ -0.91
AP001007.3-201ENST00000560744 KANK4Q5T7N3 995 aaPredicted RBP9.36□□□□□ -0.91
AP001007.3-201ENST00000560744 REREQ9P2R6 1566 aa9.36□□□□□ -0.91
AP001007.3-201ENST00000560744 LRRC9Q6ZRR7 1453 aa9.35□□□□□ -0.91
AP001007.3-201ENST00000560744 ABCB7O75027 752 aa9.35□□□□□ -0.91
AP001007.3-201ENST00000560744 CEBPAP49715 358 aaPredicted RBP9.35□□□□□ -0.91
AP001007.3-201ENST00000560744 FER1L4A9Z1Z3 1794 aa9.35□□□□□ -0.91
AP001007.3-201ENST00000560744 MBD5Q9P267 1494 aa9.34□□□□□ -0.91
AP001007.3-201ENST00000560744 SUPT6HQ7KZ85 1726 aaKnown RBP9.34□□□□□ -0.91
AP001007.3-201ENST00000560744 AGLP35573 1532 aa9.34□□□□□ -0.91
AP001007.3-201ENST00000560744 ATP7AQ04656 1500 aa9.33□□□□□ -0.92
AP001007.3-201ENST00000560744 MAP3K1Q13233 1512 aa9.33□□□□□ -0.92
AP001007.3-201ENST00000560744 POLA2Q14181 598 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms