RNA–Protein interactions for RNA: ENST00000560636.5

SEMA6D-215, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-215ENST00000560636 FBXO22Q8NEZ5 403 aa13.97□□□□□ -0.17
SEMA6D-215ENST00000560636 TMEM121BQ9BXQ6 578 aaPredicted RBP13.91□□□□□ -0.18
SEMA6D-215ENST00000560636 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
SEMA6D-215ENST00000560636 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
SEMA6D-215ENST00000560636 NKX1-1Q15270 411 aaPredicted RBP13.83□□□□□ -0.2
SEMA6D-215ENST00000560636 RYDENQ9NUL5 291 aaKnown RBP13.82□□□□□ -0.2
SEMA6D-215ENST00000560636 FAM163AQ96GL9 167 aaPredicted RBP13.81□□□□□ -0.2
SEMA6D-215ENST00000560636 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
SEMA6D-215ENST00000560636 SNPHO15079 494 aa13.79□□□□□ -0.2
SEMA6D-215ENST00000560636 PPP1R37O75864 691 aa13.78□□□□□ -0.2
SEMA6D-215ENST00000560636 ATAD2BQ9ULI0 1458 aa13.76□□□□□ -0.21
SEMA6D-215ENST00000560636 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
SEMA6D-215ENST00000560636 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
SEMA6D-215ENST00000560636 TMEM92Q6UXU6 159 aa13.72□□□□□ -0.21
SEMA6D-215ENST00000560636 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.21
SEMA6D-215ENST00000560636 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
SEMA6D-215ENST00000560636 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
SEMA6D-215ENST00000560636 LCE2DQ5TA82 110 aaPredicted RBP13.67□□□□□ -0.22
SEMA6D-215ENST00000560636 HMGXB3Q12766 1538 aa13.67□□□□□ -0.22
SEMA6D-215ENST00000560636 ST18O60284 1047 aa13.66□□□□□ -0.22
SEMA6D-215ENST00000560636 BAZ1BQ9UIG0 1483 aaKnown RBP13.64□□□□□ -0.23
SEMA6D-215ENST00000560636 TMC2Q8TDI7 906 aa13.64□□□□□ -0.23
SEMA6D-215ENST00000560636 C2orf72A6NCS6 295 aa13.62□□□□□ -0.23
SEMA6D-215ENST00000560636 POTEMA6NI47 508 aa13.62□□□□□ -0.23
SEMA6D-215ENST00000560636 DOK7Q18PE1 504 aa13.62□□□□□ -0.23
SEMA6D-215ENST00000560636 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
SEMA6D-215ENST00000560636 ERCC6Q03468 1493 aa13.61□□□□□ -0.23
SEMA6D-215ENST00000560636 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
SEMA6D-215ENST00000560636 MROH2BQ7Z745 1585 aa13.6□□□□□ -0.23
SEMA6D-215ENST00000560636 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
SEMA6D-215ENST00000560636 KIF3CO14782 793 aa13.59□□□□□ -0.23
SEMA6D-215ENST00000560636 ZNF710Q8N1W2 664 aa13.59□□□□□ -0.23
SEMA6D-215ENST00000560636 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.59□□□□□ -0.23
SEMA6D-215ENST00000560636 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
SEMA6D-215ENST00000560636 SPRYD3Q8NCJ5 442 aa13.52□□□□□ -0.25
SEMA6D-215ENST00000560636 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
SEMA6D-215ENST00000560636 NESP48681 1621 aa13.52□□□□□ -0.25
SEMA6D-215ENST00000560636 CUX2O14529 1486 aa13.51□□□□□ -0.25
SEMA6D-215ENST00000560636 MARVELD3Q96A59 401 aa13.51□□□□□ -0.25
SEMA6D-215ENST00000560636 ZSWIM6Q9HCJ5 1215 aa13.49□□□□□ -0.25
SEMA6D-215ENST00000560636 EMP3P54852 163 aa13.48□□□□□ -0.25
SEMA6D-215ENST00000560636 HOXB1P14653 301 aaPredicted RBP13.47□□□□□ -0.25
SEMA6D-215ENST00000560636 FOXK1P85037 733 aa13.47□□□□□ -0.25
SEMA6D-215ENST00000560636 PAXIP1Q6ZW49 1069 aaPredicted RBP13.46□□□□□ -0.25
SEMA6D-215ENST00000560636 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
SEMA6D-215ENST00000560636 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
SEMA6D-215ENST00000560636 PDE4AP27815 886 aa13.45□□□□□ -0.26
SEMA6D-215ENST00000560636 WIZO95785 1651 aa13.44□□□□□ -0.26
SEMA6D-215ENST00000560636 DSG2Q14126 1118 aa13.44□□□□□ -0.26
SEMA6D-215ENST00000560636 PLPP6Q8IY26 295 aa13.44□□□□□ -0.26
SEMA6D-215ENST00000560636 CRISPLD2Q9H0B8 497 aa13.44□□□□□ -0.26
SEMA6D-215ENST00000560636 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
SEMA6D-215ENST00000560636 GPR153Q6NV75 609 aa13.42□□□□□ -0.26
SEMA6D-215ENST00000560636 NCKAP5LQ9HCH0 1330 aa13.41□□□□□ -0.26
SEMA6D-215ENST00000560636 SLC34A2O95436 690 aa13.41□□□□□ -0.26
SEMA6D-215ENST00000560636 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
SEMA6D-215ENST00000560636 ARSIQ5FYB1 569 aa13.4□□□□□ -0.26
SEMA6D-215ENST00000560636 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
SEMA6D-215ENST00000560636 LARP6Q9BRS8 491 aaKnown RBP13.39□□□□□ -0.27
SEMA6D-215ENST00000560636 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
SEMA6D-215ENST00000560636 FAM205CA6NFA0 338 aa13.38□□□□□ -0.27
SEMA6D-215ENST00000560636 PPP1R15BQ5SWA1 713 aa13.38□□□□□ -0.27
SEMA6D-215ENST00000560636 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
SEMA6D-215ENST00000560636 CDAN1Q8IWY9 1227 aa13.36□□□□□ -0.27
SEMA6D-215ENST00000560636 PCDHGA4Q9Y5G9 962 aa13.36□□□□□ -0.27
SEMA6D-215ENST00000560636 ERBB3P21860 1342 aa13.36□□□□□ -0.27
SEMA6D-215ENST00000560636 DDX27Q96GQ7 796 aaKnown RBP13.35□□□□□ -0.27
SEMA6D-215ENST00000560636 KHSRPQ92945 711 aaKnown RBP eCLIP13.34□□□□□ -0.27
SEMA6D-215ENST00000560636 HS3ST6Q96QI5 342 aa13.34□□□□□ -0.27
SEMA6D-215ENST00000560636 KIF21AQ7Z4S6 1674 aa13.33□□□□□ -0.28
SEMA6D-215ENST00000560636 PTCD2Q8WV60 388 aaKnown RBP13.32□□□□□ -0.28
SEMA6D-215ENST00000560636 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
SEMA6D-215ENST00000560636 TBC1D12O60347 775 aa13.3□□□□□ -0.28
SEMA6D-215ENST00000560636 NUDT7P0C024 238 aa13.3□□□□□ -0.28
SEMA6D-215ENST00000560636 MFSD10Q14728 455 aa13.3□□□□□ -0.28
SEMA6D-215ENST00000560636 POTEB3A0JP26 581 aa13.28□□□□□ -0.28
SEMA6D-215ENST00000560636 VARS2Q5ST30 1063 aaKnown RBP13.28□□□□□ -0.28
SEMA6D-215ENST00000560636 POTEBQ6S5H4 581 aa13.28□□□□□ -0.28
SEMA6D-215ENST00000560636 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
SEMA6D-215ENST00000560636 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.29
SEMA6D-215ENST00000560636 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
SEMA6D-215ENST00000560636 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
SEMA6D-215ENST00000560636 CFTRP13569 1480 aa13.24□□□□□ -0.29
SEMA6D-215ENST00000560636 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
SEMA6D-215ENST00000560636 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
SEMA6D-215ENST00000560636 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
SEMA6D-215ENST00000560636 LHX6Q9UPM6 363 aa13.21□□□□□ -0.29
SEMA6D-215ENST00000560636 WDR62O43379 1518 aa13.18□□□□□ -0.3
SEMA6D-215ENST00000560636 KDM4FA0A1W2PPD8 638 aa13.17□□□□□ -0.3
SEMA6D-215ENST00000560636 ZNF687Q8N1G0 1237 aa13.17□□□□□ -0.3
SEMA6D-215ENST00000560636 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
SEMA6D-215ENST00000560636 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
SEMA6D-215ENST00000560636 WDR70Q9NW82 654 aa13.16□□□□□ -0.3
SEMA6D-215ENST00000560636 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
SEMA6D-215ENST00000560636 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
SEMA6D-215ENST00000560636 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
SEMA6D-215ENST00000560636 PLSCR2Q9NRY7 297 aa13.14□□□□□ -0.31
SEMA6D-215ENST00000560636 CAMK2BQ13554 666 aa13.12□□□□□ -0.31
SEMA6D-215ENST00000560636 KRTAP3-3Q9BYR6 98 aa13.12□□□□□ -0.31
SEMA6D-215ENST00000560636 KRTAP3-2Q9BYR7 98 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms