RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 ARID4BQ4LE39 1312 aaPredicted RBP27.01■■□□□ 1.91
HMG20A-210ENST00000560498 BCORL1Q5H9F3 1711 aa27■■□□□ 1.91
HMG20A-210ENST00000560498 MADDQ8WXG6 1647 aa27■■□□□ 1.91
HMG20A-210ENST00000560498 YEATS2Q9ULM3 1422 aa26.97■■□□□ 1.91
HMG20A-210ENST00000560498 ARHGEF40Q8TER5 1519 aa26.95■■□□□ 1.91
HMG20A-210ENST00000560498 MYO5CQ9NQX4 1742 aa26.95■■□□□ 1.9
HMG20A-210ENST00000560498 ZMYM4Q5VZL5 1548 aa26.95■■□□□ 1.9
HMG20A-210ENST00000560498 CCDC18Q5T9S5 1454 aa26.94■■□□□ 1.9
HMG20A-210ENST00000560498 POGZQ7Z3K3 1410 aa26.94■■□□□ 1.9
HMG20A-210ENST00000560498 HSPA2P54652 639 aa26.94■■□□□ 1.9
HMG20A-210ENST00000560498 ILDR2Q71H61 639 aa26.93■■□□□ 1.9
HMG20A-210ENST00000560498 FYCO1Q9BQS8 1478 aa26.91■■□□□ 1.9
HMG20A-210ENST00000560498 ARHGAP5Q13017 1502 aa26.9■■□□□ 1.9
HMG20A-210ENST00000560498 ZFYVE16Q7Z3T8 1539 aa26.9■■□□□ 1.9
HMG20A-210ENST00000560498 MAGI2Q86UL8 1455 aa26.9■■□□□ 1.9
HMG20A-210ENST00000560498 CERKQ8TCT0 537 aa26.9■■□□□ 1.9
HMG20A-210ENST00000560498 RIMS1Q86UR5 1692 aaKnown RBP26.89■■□□□ 1.9
HMG20A-210ENST00000560498 AFAP1Q8N556 730 aa26.87■■□□□ 1.89
HMG20A-210ENST00000560498 PLPPR3Q6T4P5 718 aa26.86■■□□□ 1.89
HMG20A-210ENST00000560498 DISP3Q9P2K9 1392 aa26.85■■□□□ 1.89
HMG20A-210ENST00000560498 SOCS7O14512 581 aa26.85■■□□□ 1.89
HMG20A-210ENST00000560498 SIGLEC1Q9BZZ2 1709 aa26.84■■□□□ 1.89
HMG20A-210ENST00000560498 CDC42BPBQ9Y5S2 1711 aa26.82■■□□□ 1.88
HMG20A-210ENST00000560498 MLECQ14165 292 aa26.81■■□□□ 1.88
HMG20A-210ENST00000560498 ATP10AO60312 1499 aa26.8■■□□□ 1.88
HMG20A-210ENST00000560498 ZNF518AQ6AHZ1 1483 aa26.8■■□□□ 1.88
HMG20A-210ENST00000560498 ARHGEF12Q9NZN5 1544 aa26.78■■□□□ 1.88
HMG20A-210ENST00000560498 PREX2Q70Z35 1606 aa26.77■■□□□ 1.88
HMG20A-210ENST00000560498 CEP162Q5TB80 1403 aa26.77■■□□□ 1.88
HMG20A-210ENST00000560498 TRAPPC8Q9Y2L5 1435 aa26.75■■□□□ 1.87
HMG20A-210ENST00000560498 LOC105371045A0A1W2PR82 267 aa26.75■■□□□ 1.87
HMG20A-210ENST00000560498 MYT1LQ9UL68 1186 aa26.75■■□□□ 1.87
HMG20A-210ENST00000560498 KDM5CP41229 1560 aa26.75■■□□□ 1.87
HMG20A-210ENST00000560498 C9orf84Q5VXU9 1444 aa26.74■■□□□ 1.87
HMG20A-210ENST00000560498 ZNF777Q9ULD5 760 aaPredicted RBP26.73■■□□□ 1.87
HMG20A-210ENST00000560498 GPATCH8Q9UKJ3 1502 aaKnown RBP26.72■■□□□ 1.87
HMG20A-210ENST00000560498 CDC42BPAQ5VT25 1732 aa26.72■■□□□ 1.87
HMG20A-210ENST00000560498 ABCC1P33527 1531 aa26.71■■□□□ 1.87
HMG20A-210ENST00000560498 MTUS2Q5JR59 1369 aa26.69■■□□□ 1.86
HMG20A-210ENST00000560498 MLH3Q9UHC1 1453 aa26.68■■□□□ 1.86
HMG20A-210ENST00000560498 HNRNPMP52272 730 aaKnown RBP eCLIP26.65■■□□□ 1.86
HMG20A-210ENST00000560498 DIP2CQ9Y2E4 1556 aa26.65■■□□□ 1.86
HMG20A-210ENST00000560498 ITSN2Q9NZM3 1697 aa26.65■■□□□ 1.86
HMG20A-210ENST00000560498 CCNB3Q8WWL7 1395 aa26.64■■□□□ 1.86
HMG20A-210ENST00000560498 CFDP1Q9UEE9 299 aaPredicted RBP26.64■■□□□ 1.86
HMG20A-210ENST00000560498 SAMD9LQ8IVG5 1584 aa26.63■■□□□ 1.85
HMG20A-210ENST00000560498 ABCA6Q8N139 1617 aa26.61■■□□□ 1.85
HMG20A-210ENST00000560498 CEBPAP49715 358 aaPredicted RBP26.59■■□□□ 1.85
HMG20A-210ENST00000560498 SYCP2Q9BX26 1530 aa26.59■■□□□ 1.85
HMG20A-210ENST00000560498 FER1L4A9Z1Z3 1794 aa26.58■■□□□ 1.85
HMG20A-210ENST00000560498 SPATA31D1Q6ZQQ2 1576 aa26.58■■□□□ 1.85
HMG20A-210ENST00000560498 KIDINS220Q9ULH0 1771 aa26.56■■□□□ 1.84
HMG20A-210ENST00000560498 REREQ9P2R6 1566 aa26.56■■□□□ 1.84
HMG20A-210ENST00000560498 ZNF644Q9H582 1327 aaPredicted RBP26.56■■□□□ 1.84
HMG20A-210ENST00000560498 SPAG9O60271 1321 aaKnown RBP26.55■■□□□ 1.84
HMG20A-210ENST00000560498 KIAA1107Q9UPP5 1409 aa26.55■■□□□ 1.84
HMG20A-210ENST00000560498 EHBP1L1Q8N3D4 1523 aa26.55■■□□□ 1.84
HMG20A-210ENST00000560498 TIAM1Q13009 1591 aa26.51■■□□□ 1.83
HMG20A-210ENST00000560498 AGLP35573 1532 aa26.51■■□□□ 1.83
HMG20A-210ENST00000560498 PLEKHH2Q8IVE3 1493 aa26.51■■□□□ 1.83
HMG20A-210ENST00000560498 PREX1Q8TCU6 1659 aa26.5■■□□□ 1.83
HMG20A-210ENST00000560498 STRCQ7RTU9 1775 aa26.5■■□□□ 1.83
HMG20A-210ENST00000560498 VPS8Q8N3P4 1428 aa26.47■■□□□ 1.83
HMG20A-210ENST00000560498 DMRT2Q9Y5R5 561 aa26.46■■□□□ 1.83
HMG20A-210ENST00000560498 NCOA2Q15596 1464 aa26.45■■□□□ 1.82
HMG20A-210ENST00000560498 ATP7AQ04656 1500 aa26.44■■□□□ 1.82
HMG20A-210ENST00000560498 MBD5Q9P267 1494 aa26.43■■□□□ 1.82
HMG20A-210ENST00000560498 ESF1Q9H501 851 aaKnown RBP26.42■■□□□ 1.82
HMG20A-210ENST00000560498 INO80Q9ULG1 1556 aaPredicted RBP26.4■■□□□ 1.82
HMG20A-210ENST00000560498 KANK4Q5T7N3 995 aaPredicted RBP26.38■■□□□ 1.81
HMG20A-210ENST00000560498 A2MP01023 1474 aa26.37■■□□□ 1.81
HMG20A-210ENST00000560498 SUPT6HQ7KZ85 1726 aaKnown RBP26.37■■□□□ 1.81
HMG20A-210ENST00000560498 LRRC9Q6ZRR7 1453 aa26.36■■□□□ 1.81
HMG20A-210ENST00000560498 C3P01024 1663 aa26.34■■□□□ 1.81
HMG20A-210ENST00000560498 UHRF1BP1Q6BDS2 1440 aa26.33■■□□□ 1.81
HMG20A-210ENST00000560498 PLXNC1O60486 1568 aa26.33■■□□□ 1.8
HMG20A-210ENST00000560498 CNTLNQ9NXG0 1405 aa26.32■■□□□ 1.8
HMG20A-210ENST00000560498 CAMSAP2Q08AD1 1489 aa26.32■■□□□ 1.8
HMG20A-210ENST00000560498 GGT6Q6P531 493 aa26.32■■□□□ 1.8
HMG20A-210ENST00000560498 SETD1BQ9UPS6 1966 aaKnown RBP26.31■■□□□ 1.8
HMG20A-210ENST00000560498 RTEL1-TNFRSF6BF6WH68 1400 aa26.31■■□□□ 1.8
HMG20A-210ENST00000560498 ZMYM3Q14202 1370 aa26.29■■□□□ 1.8
HMG20A-210ENST00000560498 PTPRTO14522 1441 aa26.28■■□□□ 1.8
HMG20A-210ENST00000560498 RSPH4AQ5TD94 716 aa26.27■■□□□ 1.8
HMG20A-210ENST00000560498 CCDC141Q6ZP82 1450 aa26.27■■□□□ 1.8
HMG20A-210ENST00000560498 MAP3K1Q13233 1512 aa26.27■■□□□ 1.8
HMG20A-210ENST00000560498 LTBP4Q8N2S1 1624 aa26.27■■□□□ 1.8
HMG20A-210ENST00000560498 DHX29Q7Z478 1369 aaKnown RBP26.25■■□□□ 1.79
HMG20A-210ENST00000560498 ADGBQ8N7X0 1667 aa26.25■■□□□ 1.79
HMG20A-210ENST00000560498 MROH2AA6NES4 1674 aa26.2■■□□□ 1.78
HMG20A-210ENST00000560498 CLTCQ00610 1675 aaKnown RBP26.2■■□□□ 1.78
HMG20A-210ENST00000560498 TSPY4P0CV99 314 aa26.2■■□□□ 1.78
HMG20A-210ENST00000560498 TSPY10P0CW01 314 aa26.2■■□□□ 1.78
HMG20A-210ENST00000560498 KIF3BO15066 747 aa26.19■■□□□ 1.78
HMG20A-210ENST00000560498 PPP6R1Q9UPN7 881 aa26.19■■□□□ 1.78
HMG20A-210ENST00000560498 IQSEC2Q5JU85 1478 aa26.18■■□□□ 1.78
HMG20A-210ENST00000560498 ARHGEF5Q12774 1597 aa26.18■■□□□ 1.78
HMG20A-210ENST00000560498 NPATQ14207 1427 aa26.18■■□□□ 1.78
HMG20A-210ENST00000560498 MYOM3Q5VTT5 1437 aa26.16■■□□□ 1.78
HMG20A-210ENST00000560498 APLP2Q06481 763 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms