RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ZFYVE16Q7Z3T8 1539 aa24.57■■□□□ 1.52
SNRPA1-210ENST00000560383 POGZQ7Z3K3 1410 aa24.57■■□□□ 1.52
SNRPA1-210ENST00000560383 PTPRMP28827 1452 aa24.55■■□□□ 1.52
SNRPA1-210ENST00000560383 MADDQ8WXG6 1647 aa24.54■■□□□ 1.52
SNRPA1-210ENST00000560383 FYCO1Q9BQS8 1478 aa24.53■■□□□ 1.52
SNRPA1-210ENST00000560383 SCAPERQ9BY12 1400 aa24.52■■□□□ 1.52
SNRPA1-210ENST00000560383 EFCAB2Q5VUJ9 269 aa24.5■■□□□ 1.51
SNRPA1-210ENST00000560383 YEATS2Q9ULM3 1422 aa24.49■■□□□ 1.51
SNRPA1-210ENST00000560383 ARHGAP5Q13017 1502 aa24.49■■□□□ 1.51
SNRPA1-210ENST00000560383 ARID4BQ4LE39 1312 aaPredicted RBP24.48■■□□□ 1.51
SNRPA1-210ENST00000560383 PREX2Q70Z35 1606 aa24.48■■□□□ 1.51
SNRPA1-210ENST00000560383 SIGLEC1Q9BZZ2 1709 aa24.48■■□□□ 1.51
SNRPA1-210ENST00000560383 CDC42BPBQ9Y5S2 1711 aa24.47■■□□□ 1.51
SNRPA1-210ENST00000560383 ZNF518AQ6AHZ1 1483 aa24.47■■□□□ 1.51
SNRPA1-210ENST00000560383 KDM5CP41229 1560 aa24.46■■□□□ 1.51
SNRPA1-210ENST00000560383 CEP162Q5TB80 1403 aa24.46■■□□□ 1.51
SNRPA1-210ENST00000560383 RIMS1Q86UR5 1692 aaKnown RBP24.45■■□□□ 1.5
SNRPA1-210ENST00000560383 LOC105371045A0A1W2PR82 267 aa24.42■■□□□ 1.5
SNRPA1-210ENST00000560383 C9orf84Q5VXU9 1444 aa24.4■■□□□ 1.5
SNRPA1-210ENST00000560383 ATP10AO60312 1499 aa24.39■■□□□ 1.5
SNRPA1-210ENST00000560383 CDC42BPAQ5VT25 1732 aa24.39■■□□□ 1.5
SNRPA1-210ENST00000560383 ABCC1P33527 1531 aa24.39■■□□□ 1.49
SNRPA1-210ENST00000560383 FER1L4A9Z1Z3 1794 aa24.37■■□□□ 1.49
SNRPA1-210ENST00000560383 ITSN2Q9NZM3 1697 aa24.36■■□□□ 1.49
SNRPA1-210ENST00000560383 REREQ9P2R6 1566 aa24.35■■□□□ 1.49
SNRPA1-210ENST00000560383 ARHGEF12Q9NZN5 1544 aa24.34■■□□□ 1.49
SNRPA1-210ENST00000560383 DIP2CQ9Y2E4 1556 aa24.33■■□□□ 1.48
SNRPA1-210ENST00000560383 MLH3Q9UHC1 1453 aa24.32■■□□□ 1.48
SNRPA1-210ENST00000560383 LMTK3Q96Q04 1460 aa24.32■■□□□ 1.48
SNRPA1-210ENST00000560383 ABCA6Q8N139 1617 aa24.29■■□□□ 1.48
SNRPA1-210ENST00000560383 AFAP1Q8N556 730 aa24.28■■□□□ 1.48
SNRPA1-210ENST00000560383 TRAPPC8Q9Y2L5 1435 aa24.26■■□□□ 1.47
SNRPA1-210ENST00000560383 SAMD9LQ8IVG5 1584 aa24.25■■□□□ 1.47
SNRPA1-210ENST00000560383 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
SNRPA1-210ENST00000560383 KIDINS220Q9ULH0 1771 aa24.24■■□□□ 1.47
SNRPA1-210ENST00000560383 AGLP35573 1532 aa24.23■■□□□ 1.47
SNRPA1-210ENST00000560383 MLECQ14165 292 aa24.21■■□□□ 1.47
SNRPA1-210ENST00000560383 EHBP1L1Q8N3D4 1523 aa24.2■■□□□ 1.47
SNRPA1-210ENST00000560383 SYCP2Q9BX26 1530 aa24.2■■□□□ 1.47
SNRPA1-210ENST00000560383 MTUS2Q5JR59 1369 aa24.2■■□□□ 1.46
SNRPA1-210ENST00000560383 PLEKHH2Q8IVE3 1493 aa24.19■■□□□ 1.46
SNRPA1-210ENST00000560383 VPS8Q8N3P4 1428 aa24.19■■□□□ 1.46
SNRPA1-210ENST00000560383 KIAA1107Q9UPP5 1409 aa24.18■■□□□ 1.46
SNRPA1-210ENST00000560383 PREX1Q8TCU6 1659 aa24.18■■□□□ 1.46
SNRPA1-210ENST00000560383 ILDR1Q86SU0 546 aaPredicted RBP24.17■■□□□ 1.46
SNRPA1-210ENST00000560383 MYT1LQ9UL68 1186 aa24.16■■□□□ 1.46
SNRPA1-210ENST00000560383 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
SNRPA1-210ENST00000560383 TIAM1Q13009 1591 aa24.15■■□□□ 1.46
SNRPA1-210ENST00000560383 INO80Q9ULG1 1556 aaPredicted RBP24.13■■□□□ 1.45
SNRPA1-210ENST00000560383 ATP7AQ04656 1500 aa24.11■■□□□ 1.45
SNRPA1-210ENST00000560383 CFDP1Q9UEE9 299 aaPredicted RBP24.11■■□□□ 1.45
SNRPA1-210ENST00000560383 ZNF777Q9ULD5 760 aaPredicted RBP24.1■■□□□ 1.45
SNRPA1-210ENST00000560383 C3P01024 1663 aa24.09■■□□□ 1.45
SNRPA1-210ENST00000560383 SPAG9O60271 1321 aaKnown RBP24.08■■□□□ 1.44
SNRPA1-210ENST00000560383 PLXNC1O60486 1568 aa24.08■■□□□ 1.44
SNRPA1-210ENST00000560383 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
SNRPA1-210ENST00000560383 PLPPR3Q6T4P5 718 aa24.07■■□□□ 1.44
SNRPA1-210ENST00000560383 CNTLNQ9NXG0 1405 aa24.06■■□□□ 1.44
SNRPA1-210ENST00000560383 SUPT6HQ7KZ85 1726 aaKnown RBP24.06■■□□□ 1.44
SNRPA1-210ENST00000560383 MROH2AA6NES4 1674 aa24.05■■□□□ 1.44
SNRPA1-210ENST00000560383 MAP3K1Q13233 1512 aa24.05■■□□□ 1.44
SNRPA1-210ENST00000560383 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.44
SNRPA1-210ENST00000560383 HSPA2P54652 639 aa24.04■■□□□ 1.44
SNRPA1-210ENST00000560383 ADGBQ8N7X0 1667 aa24.02■■□□□ 1.44
SNRPA1-210ENST00000560383 UHRF1BP1Q6BDS2 1440 aa24.01■■□□□ 1.43
SNRPA1-210ENST00000560383 CEBPAP49715 358 aaPredicted RBP24.01■■□□□ 1.43
SNRPA1-210ENST00000560383 MBD5Q9P267 1494 aa24■■□□□ 1.43
SNRPA1-210ENST00000560383 A2MP01023 1474 aa24■■□□□ 1.43
SNRPA1-210ENST00000560383 NCOA2Q15596 1464 aa24■■□□□ 1.43
SNRPA1-210ENST00000560383 LRRC9Q6ZRR7 1453 aa24■■□□□ 1.43
SNRPA1-210ENST00000560383 ESF1Q9H501 851 aaKnown RBP23.99■■□□□ 1.43
SNRPA1-210ENST00000560383 RTEL1-TNFRSF6BF6WH68 1400 aa23.96■■□□□ 1.43
SNRPA1-210ENST00000560383 FBXO41Q8TF61 875 aa23.95■■□□□ 1.42
SNRPA1-210ENST00000560383 CAMSAP2Q08AD1 1489 aa23.94■■□□□ 1.42
SNRPA1-210ENST00000560383 NPATQ14207 1427 aa23.93■■□□□ 1.42
SNRPA1-210ENST00000560383 STRCQ7RTU9 1775 aa23.93■■□□□ 1.42
SNRPA1-210ENST00000560383 ZNF644Q9H582 1327 aaPredicted RBP23.93■■□□□ 1.42
SNRPA1-210ENST00000560383 KANK4Q5T7N3 995 aaPredicted RBP23.93■■□□□ 1.42
SNRPA1-210ENST00000560383 CCDC141Q6ZP82 1450 aa23.92■■□□□ 1.42
SNRPA1-210ENST00000560383 CLTCQ00610 1675 aaKnown RBP23.92■■□□□ 1.42
SNRPA1-210ENST00000560383 ARHGEF5Q12774 1597 aa23.89■■□□□ 1.41
SNRPA1-210ENST00000560383 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
SNRPA1-210ENST00000560383 ZMYM3Q14202 1370 aa23.87■■□□□ 1.41
SNRPA1-210ENST00000560383 RSPH4AQ5TD94 716 aa23.86■■□□□ 1.41
SNRPA1-210ENST00000560383 PPP6R1Q9UPN7 881 aa23.86■■□□□ 1.41
SNRPA1-210ENST00000560383 FAM135AQ9P2D6 1515 aa23.85■■□□□ 1.41
SNRPA1-210ENST00000560383 DMRT2Q9Y5R5 561 aa23.85■■□□□ 1.41
SNRPA1-210ENST00000560383 ZNF142P52746 1687 aaPredicted RBP23.84■■□□□ 1.41
SNRPA1-210ENST00000560383 APLP2Q06481 763 aa23.84■■□□□ 1.41
SNRPA1-210ENST00000560383 DHX29Q7Z478 1369 aaKnown RBP23.83■■□□□ 1.41
SNRPA1-210ENST00000560383 MYO3AQ8NEV4 1616 aa23.82■■□□□ 1.4
SNRPA1-210ENST00000560383 PTPRTO14522 1441 aa23.81■■□□□ 1.4
SNRPA1-210ENST00000560383 MAST1Q9Y2H9 1570 aa23.79■■□□□ 1.4
SNRPA1-210ENST00000560383 PTPRKQ15262 1439 aa23.79■■□□□ 1.4
SNRPA1-210ENST00000560383 NCOA1Q15788 1441 aa23.79■■□□□ 1.4
SNRPA1-210ENST00000560383 MIA2Q96PC5 1412 aa23.79■■□□□ 1.4
SNRPA1-210ENST00000560383 MYOM3Q5VTT5 1437 aa23.78■■□□□ 1.4
SNRPA1-210ENST00000560383 GGT6Q6P531 493 aa23.78■■□□□ 1.4
SNRPA1-210ENST00000560383 KDM5DQ9BY66 1539 aa23.76■■□□□ 1.39
SNRPA1-210ENST00000560383 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms