RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 YEATS2Q9ULM3 1422 aa18.49■□□□□ 0.55
LINC02253-202ENST00000560314 SIGLEC1Q9BZZ2 1709 aa18.49■□□□□ 0.55
LINC02253-202ENST00000560314 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
LINC02253-202ENST00000560314 FER1L4A9Z1Z3 1794 aa18.48■□□□□ 0.55
LINC02253-202ENST00000560314 CDK11AQ9UQ88 783 aaPredicted RBP18.48■□□□□ 0.55
LINC02253-202ENST00000560314 SCAPERQ9BY12 1400 aa18.48■□□□□ 0.55
LINC02253-202ENST00000560314 TROQ12816 1431 aaPredicted RBP18.46■□□□□ 0.55
LINC02253-202ENST00000560314 CLIP1P30622 1438 aa18.45■□□□□ 0.54
LINC02253-202ENST00000560314 C9orf84Q5VXU9 1444 aa18.44■□□□□ 0.54
LINC02253-202ENST00000560314 ZNF518AQ6AHZ1 1483 aa18.44■□□□□ 0.54
LINC02253-202ENST00000560314 EFCAB2Q5VUJ9 269 aa18.43■□□□□ 0.54
LINC02253-202ENST00000560314 ATP10AO60312 1499 aa18.43■□□□□ 0.54
LINC02253-202ENST00000560314 LRRIQ1Q96JM4 1722 aa18.43■□□□□ 0.54
LINC02253-202ENST00000560314 KDM5CP41229 1560 aa18.42■□□□□ 0.54
LINC02253-202ENST00000560314 FBXO41Q8TF61 875 aa18.42■□□□□ 0.54
LINC02253-202ENST00000560314 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
LINC02253-202ENST00000560314 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
LINC02253-202ENST00000560314 ATP1B4Q9UN42 357 aaPredicted RBP18.4■□□□□ 0.54
LINC02253-202ENST00000560314 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.54
LINC02253-202ENST00000560314 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
LINC02253-202ENST00000560314 PREX2Q70Z35 1606 aa18.38■□□□□ 0.53
LINC02253-202ENST00000560314 CDC42BPBQ9Y5S2 1711 aa18.37■□□□□ 0.53
LINC02253-202ENST00000560314 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
LINC02253-202ENST00000560314 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
LINC02253-202ENST00000560314 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
LINC02253-202ENST00000560314 DIP2CQ9Y2E4 1556 aa18.34■□□□□ 0.53
LINC02253-202ENST00000560314 ABCC1P33527 1531 aa18.33■□□□□ 0.53
LINC02253-202ENST00000560314 MLECQ14165 292 aa18.32■□□□□ 0.52
LINC02253-202ENST00000560314 MLH3Q9UHC1 1453 aa18.32■□□□□ 0.52
LINC02253-202ENST00000560314 ITSN2Q9NZM3 1697 aa18.31■□□□□ 0.52
LINC02253-202ENST00000560314 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
LINC02253-202ENST00000560314 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
LINC02253-202ENST00000560314 ABCA6Q8N139 1617 aa18.31■□□□□ 0.52
LINC02253-202ENST00000560314 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
LINC02253-202ENST00000560314 HSPA2P54652 639 aa18.29■□□□□ 0.52
LINC02253-202ENST00000560314 CDC42BPAQ5VT25 1732 aa18.29■□□□□ 0.52
LINC02253-202ENST00000560314 AGLP35573 1532 aa18.28■□□□□ 0.52
LINC02253-202ENST00000560314 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
LINC02253-202ENST00000560314 AFAP1Q8N556 730 aa18.27■□□□□ 0.52
LINC02253-202ENST00000560314 KIDINS220Q9ULH0 1771 aa18.24■□□□□ 0.51
LINC02253-202ENST00000560314 UHRF1BP1Q6BDS2 1440 aa18.23■□□□□ 0.51
LINC02253-202ENST00000560314 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
LINC02253-202ENST00000560314 MYT1LQ9UL68 1186 aa18.23■□□□□ 0.51
LINC02253-202ENST00000560314 C3P01024 1663 aa18.22■□□□□ 0.51
LINC02253-202ENST00000560314 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
LINC02253-202ENST00000560314 SAMD9LQ8IVG5 1584 aa18.19■□□□□ 0.5
LINC02253-202ENST00000560314 CNTLNQ9NXG0 1405 aa18.19■□□□□ 0.5
LINC02253-202ENST00000560314 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
LINC02253-202ENST00000560314 CEBPAP49715 358 aaPredicted RBP18.17■□□□□ 0.5
LINC02253-202ENST00000560314 DMRT2Q9Y5R5 561 aa18.17■□□□□ 0.5
LINC02253-202ENST00000560314 MROH2AA6NES4 1674 aa18.17■□□□□ 0.5
LINC02253-202ENST00000560314 PLEKHH2Q8IVE3 1493 aa18.16■□□□□ 0.5
LINC02253-202ENST00000560314 CERKQ8TCT0 537 aa18.16■□□□□ 0.5
LINC02253-202ENST00000560314 GPATCH8Q9UKJ3 1502 aaKnown RBP18.15■□□□□ 0.5
LINC02253-202ENST00000560314 ESF1Q9H501 851 aaKnown RBP18.15■□□□□ 0.5
LINC02253-202ENST00000560314 KIAA1107Q9UPP5 1409 aa18.15■□□□□ 0.5
LINC02253-202ENST00000560314 INO80Q9ULG1 1556 aaPredicted RBP18.13■□□□□ 0.49
LINC02253-202ENST00000560314 ATP7AQ04656 1500 aa18.13■□□□□ 0.49
LINC02253-202ENST00000560314 PLXNC1O60486 1568 aa18.12■□□□□ 0.49
LINC02253-202ENST00000560314 PTPRTO14522 1441 aa18.11■□□□□ 0.49
LINC02253-202ENST00000560314 NPATQ14207 1427 aa18.11■□□□□ 0.49
LINC02253-202ENST00000560314 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
LINC02253-202ENST00000560314 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
LINC02253-202ENST00000560314 CCNB3Q8WWL7 1395 aa18.08■□□□□ 0.49
LINC02253-202ENST00000560314 ZNF777Q9ULD5 760 aaPredicted RBP18.08■□□□□ 0.48
LINC02253-202ENST00000560314 EHBP1L1Q8N3D4 1523 aa18.08■□□□□ 0.48
LINC02253-202ENST00000560314 MTUS2Q5JR59 1369 aa18.07■□□□□ 0.48
LINC02253-202ENST00000560314 ADGBQ8N7X0 1667 aa18.07■□□□□ 0.48
LINC02253-202ENST00000560314 CFDP1Q9UEE9 299 aaPredicted RBP18.07■□□□□ 0.48
LINC02253-202ENST00000560314 A2MP01023 1474 aa18.06■□□□□ 0.48
LINC02253-202ENST00000560314 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
LINC02253-202ENST00000560314 ZNF142P52746 1687 aaPredicted RBP18.06■□□□□ 0.48
LINC02253-202ENST00000560314 TIAM1Q13009 1591 aa18.05■□□□□ 0.48
LINC02253-202ENST00000560314 CLTCQ00610 1675 aaKnown RBP18.03■□□□□ 0.48
LINC02253-202ENST00000560314 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.48
LINC02253-202ENST00000560314 IQSEC2Q5JU85 1478 aa18.02■□□□□ 0.48
LINC02253-202ENST00000560314 ZMYM3Q14202 1370 aa18.02■□□□□ 0.47
LINC02253-202ENST00000560314 MYO3AQ8NEV4 1616 aa18.01■□□□□ 0.47
LINC02253-202ENST00000560314 CEP162Q5TB80 1403 aa18.01■□□□□ 0.47
LINC02253-202ENST00000560314 CAMSAP1Q5T5Y3 1602 aa18.01■□□□□ 0.47
LINC02253-202ENST00000560314 LTBP4Q8N2S1 1624 aa17.99■□□□□ 0.47
LINC02253-202ENST00000560314 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
LINC02253-202ENST00000560314 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
LINC02253-202ENST00000560314 PLA2R1Q13018 1463 aa17.98■□□□□ 0.47
LINC02253-202ENST00000560314 MBD5Q9P267 1494 aa17.98■□□□□ 0.47
LINC02253-202ENST00000560314 CEP170BQ9Y4F5 1589 aaPredicted RBP17.98■□□□□ 0.47
LINC02253-202ENST00000560314 FAM135AQ9P2D6 1515 aa17.97■□□□□ 0.47
LINC02253-202ENST00000560314 PTPRKQ15262 1439 aa17.96■□□□□ 0.47
LINC02253-202ENST00000560314 CCDC141Q6ZP82 1450 aa17.94■□□□□ 0.46
LINC02253-202ENST00000560314 TCOF1Q13428 1488 aaKnown RBP17.92■□□□□ 0.46
LINC02253-202ENST00000560314 PKD2Q13563 968 aa17.91■□□□□ 0.46
LINC02253-202ENST00000560314 GGT6Q6P531 493 aa17.91■□□□□ 0.46
LINC02253-202ENST00000560314 ZNF644Q9H582 1327 aaPredicted RBP17.91■□□□□ 0.46
LINC02253-202ENST00000560314 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
LINC02253-202ENST00000560314 CAMSAP2Q08AD1 1489 aa17.9■□□□□ 0.46
LINC02253-202ENST00000560314 NCOA2Q15596 1464 aa17.9■□□□□ 0.46
LINC02253-202ENST00000560314 KDM5DQ9BY66 1539 aa17.89■□□□□ 0.45
LINC02253-202ENST00000560314 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
LINC02253-202ENST00000560314 ARHGEF5Q12774 1597 aa17.88■□□□□ 0.45
LINC02253-202ENST00000560314 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms