RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 EFCAB2Q5VUJ9 269 aa28.58■■■□□ 2.17
CRTC3-208ENST00000560098 TROQ12816 1431 aaPredicted RBP28.56■■■□□ 2.16
CRTC3-208ENST00000560098 MYO5CQ9NQX4 1742 aa28.55■■■□□ 2.16
CRTC3-208ENST00000560098 KIF14Q15058 1648 aa28.54■■■□□ 2.16
CRTC3-208ENST00000560098 CLIP1P30622 1438 aa28.53■■■□□ 2.16
CRTC3-208ENST00000560098 RIMS1Q86UR5 1692 aaKnown RBP28.53■■■□□ 2.16
CRTC3-208ENST00000560098 SIGLEC1Q9BZZ2 1709 aa28.5■■■□□ 2.15
CRTC3-208ENST00000560098 PCF11O94913 1555 aaKnown RBP28.49■■■□□ 2.15
CRTC3-208ENST00000560098 LRRIQ1Q96JM4 1722 aa28.48■■■□□ 2.15
CRTC3-208ENST00000560098 LMTK3Q96Q04 1460 aa28.48■■■□□ 2.15
CRTC3-208ENST00000560098 ARHGAP5Q13017 1502 aa28.47■■■□□ 2.15
CRTC3-208ENST00000560098 CASKIN1Q8WXD9 1431 aa28.46■■■□□ 2.15
CRTC3-208ENST00000560098 ATP10AO60312 1499 aa28.45■■■□□ 2.15
CRTC3-208ENST00000560098 MLECQ14165 292 aa28.45■■■□□ 2.15
CRTC3-208ENST00000560098 ZNF518AQ6AHZ1 1483 aa28.44■■■□□ 2.14
CRTC3-208ENST00000560098 CCDC18Q5T9S5 1454 aa28.43■■■□□ 2.14
CRTC3-208ENST00000560098 C9orf84Q5VXU9 1444 aa28.43■■■□□ 2.14
CRTC3-208ENST00000560098 PLPPR3Q6T4P5 718 aa28.42■■■□□ 2.14
CRTC3-208ENST00000560098 AFAP1Q8N556 730 aa28.4■■■□□ 2.14
CRTC3-208ENST00000560098 KDM5CP41229 1560 aa28.37■■■□□ 2.13
CRTC3-208ENST00000560098 FER1L4A9Z1Z3 1794 aa28.36■■■□□ 2.13
CRTC3-208ENST00000560098 ARHGEF12Q9NZN5 1544 aa28.36■■■□□ 2.13
CRTC3-208ENST00000560098 CDC42BPBQ9Y5S2 1711 aa28.35■■■□□ 2.13
CRTC3-208ENST00000560098 FYCO1Q9BQS8 1478 aa28.34■■■□□ 2.13
CRTC3-208ENST00000560098 MYT1LQ9UL68 1186 aa28.33■■■□□ 2.13
CRTC3-208ENST00000560098 PREX2Q70Z35 1606 aa28.32■■■□□ 2.12
CRTC3-208ENST00000560098 HSPA2P54652 639 aa28.32■■■□□ 2.12
CRTC3-208ENST00000560098 ABCC1P33527 1531 aa28.28■■■□□ 2.12
CRTC3-208ENST00000560098 MLH3Q9UHC1 1453 aa28.28■■■□□ 2.12
CRTC3-208ENST00000560098 FBXO41Q8TF61 875 aa28.28■■■□□ 2.12
CRTC3-208ENST00000560098 DIP2CQ9Y2E4 1556 aa28.28■■■□□ 2.12
CRTC3-208ENST00000560098 TRAPPC8Q9Y2L5 1435 aa28.27■■■□□ 2.12
CRTC3-208ENST00000560098 REREQ9P2R6 1566 aa28.25■■■□□ 2.11
CRTC3-208ENST00000560098 ABCA6Q8N139 1617 aa28.22■■■□□ 2.11
CRTC3-208ENST00000560098 ITSN2Q9NZM3 1697 aa28.22■■■□□ 2.11
CRTC3-208ENST00000560098 CDC42BPAQ5VT25 1732 aa28.21■■■□□ 2.11
CRTC3-208ENST00000560098 CEBPAP49715 358 aaPredicted RBP28.21■■■□□ 2.11
CRTC3-208ENST00000560098 ZNF777Q9ULD5 760 aaPredicted RBP28.17■■■□□ 2.1
CRTC3-208ENST00000560098 AGLP35573 1532 aa28.16■■■□□ 2.1
CRTC3-208ENST00000560098 GPATCH8Q9UKJ3 1502 aaKnown RBP28.16■■■□□ 2.1
CRTC3-208ENST00000560098 PREX1Q8TCU6 1659 aa28.15■■■□□ 2.1
CRTC3-208ENST00000560098 KIDINS220Q9ULH0 1771 aa28.13■■■□□ 2.09
CRTC3-208ENST00000560098 SAMD9LQ8IVG5 1584 aa28.13■■■□□ 2.09
CRTC3-208ENST00000560098 ESF1Q9H501 851 aaKnown RBP28.1■■■□□ 2.09
CRTC3-208ENST00000560098 SYCP2Q9BX26 1530 aa28.09■■■□□ 2.09
CRTC3-208ENST00000560098 HNRNPMP52272 730 aaKnown RBP eCLIP28.08■■■□□ 2.09
CRTC3-208ENST00000560098 CFDP1Q9UEE9 299 aaPredicted RBP28.08■■■□□ 2.09
CRTC3-208ENST00000560098 UHRF1BP1Q6BDS2 1440 aa28.08■■■□□ 2.08
CRTC3-208ENST00000560098 SPAG9O60271 1321 aaKnown RBP28.07■■■□□ 2.08
CRTC3-208ENST00000560098 MTUS2Q5JR59 1369 aa28.07■■■□□ 2.08
CRTC3-208ENST00000560098 CCNB3Q8WWL7 1395 aa28.07■■■□□ 2.08
CRTC3-208ENST00000560098 KIAA1107Q9UPP5 1409 aa28.05■■■□□ 2.08
CRTC3-208ENST00000560098 PLEKHH2Q8IVE3 1493 aa28.04■■■□□ 2.08
CRTC3-208ENST00000560098 C3P01024 1663 aa28.04■■■□□ 2.08
CRTC3-208ENST00000560098 CNTLNQ9NXG0 1405 aa28.02■■■□□ 2.08
CRTC3-208ENST00000560098 SETD1BQ9UPS6 1966 aaKnown RBP28.01■■■□□ 2.07
CRTC3-208ENST00000560098 CERKQ8TCT0 537 aa28■■■□□ 2.07
CRTC3-208ENST00000560098 DMRT2Q9Y5R5 561 aa27.99■■■□□ 2.07
CRTC3-208ENST00000560098 ATP7AQ04656 1500 aa27.98■■■□□ 2.07
CRTC3-208ENST00000560098 CEP162Q5TB80 1403 aa27.96■■■□□ 2.07
CRTC3-208ENST00000560098 EHBP1L1Q8N3D4 1523 aa27.96■■■□□ 2.07
CRTC3-208ENST00000560098 INO80Q9ULG1 1556 aaPredicted RBP27.95■■■□□ 2.07
CRTC3-208ENST00000560098 STRCQ7RTU9 1775 aa27.94■■■□□ 2.06
CRTC3-208ENST00000560098 TIAM1Q13009 1591 aa27.93■■■□□ 2.06
CRTC3-208ENST00000560098 A2MP01023 1474 aa27.93■■■□□ 2.06
CRTC3-208ENST00000560098 PLXNC1O60486 1568 aa27.91■■■□□ 2.06
CRTC3-208ENST00000560098 SUPT6HQ7KZ85 1726 aaKnown RBP27.91■■■□□ 2.06
CRTC3-208ENST00000560098 ZNF644Q9H582 1327 aaPredicted RBP27.9■■■□□ 2.06
CRTC3-208ENST00000560098 ZMYM3Q14202 1370 aa27.89■■■□□ 2.06
CRTC3-208ENST00000560098 MROH2AA6NES4 1674 aa27.89■■■□□ 2.06
CRTC3-208ENST00000560098 NPATQ14207 1427 aa27.88■■■□□ 2.05
CRTC3-208ENST00000560098 MBD5Q9P267 1494 aa27.87■■■□□ 2.05
CRTC3-208ENST00000560098 PTPRTO14522 1441 aa27.85■■■□□ 2.05
CRTC3-208ENST00000560098 GGT6Q6P531 493 aa27.84■■■□□ 2.05
CRTC3-208ENST00000560098 ADGBQ8N7X0 1667 aa27.81■■■□□ 2.04
CRTC3-208ENST00000560098 RTEL1-TNFRSF6BF6WH68 1400 aa27.81■■■□□ 2.04
CRTC3-208ENST00000560098 CLTCQ00610 1675 aaKnown RBP27.81■■■□□ 2.04
CRTC3-208ENST00000560098 NCOA1Q15788 1441 aa27.8■■■□□ 2.04
CRTC3-208ENST00000560098 PPP6R1Q9UPN7 881 aa27.79■■■□□ 2.04
CRTC3-208ENST00000560098 NCOA2Q15596 1464 aa27.79■■■□□ 2.04
CRTC3-208ENST00000560098 PTPRKQ15262 1439 aa27.75■■■□□ 2.03
CRTC3-208ENST00000560098 CAMSAP1Q5T5Y3 1602 aa27.74■■■□□ 2.03
CRTC3-208ENST00000560098 DHX29Q7Z478 1369 aaKnown RBP27.74■■■□□ 2.03
CRTC3-208ENST00000560098 CAMSAP2Q08AD1 1489 aa27.73■■■□□ 2.03
CRTC3-208ENST00000560098 CCDC141Q6ZP82 1450 aa27.73■■■□□ 2.03
CRTC3-208ENST00000560098 RSPH4AQ5TD94 716 aa27.72■■■□□ 2.03
CRTC3-208ENST00000560098 MYO3AQ8NEV4 1616 aa27.69■■■□□ 2.02
CRTC3-208ENST00000560098 VPS8Q8N3P4 1428 aa27.69■■■□□ 2.02
CRTC3-208ENST00000560098 LOC105371045A0A1W2PR82 267 aa27.68■■■□□ 2.02
CRTC3-208ENST00000560098 ZNF142P52746 1687 aaPredicted RBP27.67■■■□□ 2.02
CRTC3-208ENST00000560098 LTBP4Q8N2S1 1624 aa27.67■■■□□ 2.02
CRTC3-208ENST00000560098 NCKAP5LQ9HCH0 1330 aa27.66■■■□□ 2.02
CRTC3-208ENST00000560098 CEP170BQ9Y4F5 1589 aaPredicted RBP27.66■■■□□ 2.02
CRTC3-208ENST00000560098 KIF3BO15066 747 aa27.66■■■□□ 2.02
CRTC3-208ENST00000560098 LRRC9Q6ZRR7 1453 aa27.65■■■□□ 2.02
CRTC3-208ENST00000560098 PLA2R1Q13018 1463 aa27.64■■■□□ 2.02
CRTC3-208ENST00000560098 PKD2Q13563 968 aa27.63■■■□□ 2.01
CRTC3-208ENST00000560098 ARHGEF5Q12774 1597 aa27.63■■■□□ 2.01
CRTC3-208ENST00000560098 TSPY4P0CV99 314 aa27.61■■■□□ 2.01
CRTC3-208ENST00000560098 TSPY10P0CW01 314 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms