RNA–Protein interactions for RNA: ENST00000559588.5

IPO4-209, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-209ENST00000559588 WASHC2CQ9Y4E1 1318 aa14.34□□□□□ -0.11
IPO4-209ENST00000559588 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
IPO4-209ENST00000559588 PHLDB1Q86UU1 1377 aa14.33□□□□□ -0.12
IPO4-209ENST00000559588 FHOD3Q2V2M9 1422 aa14.33□□□□□ -0.12
IPO4-209ENST00000559588 MRS2Q9HD23 443 aa14.32□□□□□ -0.12
IPO4-209ENST00000559588 FGD1P98174 961 aa14.31□□□□□ -0.12
IPO4-209ENST00000559588 ARHGAP35Q9NRY4 1499 aa14.31□□□□□ -0.12
IPO4-209ENST00000559588 RRP9O43818 475 aaKnown RBP14.31□□□□□ -0.12
IPO4-209ENST00000559588 RGS3P49796 1198 aa14.3□□□□□ -0.12
IPO4-209ENST00000559588 RRP7BPQ9NSQ0 103 aa14.3□□□□□ -0.12
IPO4-209ENST00000559588 MAPKBP1O60336 1514 aa14.3□□□□□ -0.12
IPO4-209ENST00000559588 AAMPQ13685 434 aa14.29□□□□□ -0.12
IPO4-209ENST00000559588 PDIA4P13667 645 aaKnown RBP14.29□□□□□ -0.12
IPO4-209ENST00000559588 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
IPO4-209ENST00000559588 CCDC184Q52MB2 194 aa14.28□□□□□ -0.12
IPO4-209ENST00000559588 DDRGK1Q96HY6 314 aa14.28□□□□□ -0.12
IPO4-209ENST00000559588 ABCA10Q8WWZ4 1543 aa14.27□□□□□ -0.12
IPO4-209ENST00000559588 PDE4AP27815 886 aa14.27□□□□□ -0.12
IPO4-209ENST00000559588 FRAT2O75474 233 aaPredicted RBP14.27□□□□□ -0.13
IPO4-209ENST00000559588 FOXD1Q16676 465 aa14.27□□□□□ -0.13
IPO4-209ENST00000559588 DCAF11Q8TEB1 546 aa14.27□□□□□ -0.13
IPO4-209ENST00000559588 KIF21AQ7Z4S6 1674 aa14.26□□□□□ -0.13
IPO4-209ENST00000559588 RRAGDQ9NQL2 400 aaPredicted RBP14.25□□□□□ -0.13
IPO4-209ENST00000559588 ZNF326Q5BKZ1 582 aaKnown RBP14.24□□□□□ -0.13
IPO4-209ENST00000559588 GZF1Q9H116 711 aaPredicted RBP14.23□□□□□ -0.13
IPO4-209ENST00000559588 MTUS2Q5JR59 1369 aa14.22□□□□□ -0.13
IPO4-209ENST00000559588 ERICH3Q5RHP9 1530 aa14.21□□□□□ -0.13
IPO4-209ENST00000559588 HSPA5P11021 654 aaKnown RBP14.21□□□□□ -0.14
IPO4-209ENST00000559588 ZNF777Q9ULD5 760 aaPredicted RBP14.21□□□□□ -0.14
IPO4-209ENST00000559588 BBXQ8WY36 941 aaPredicted RBP14.18□□□□□ -0.14
IPO4-209ENST00000559588 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
IPO4-209ENST00000559588 JPH4Q96JJ6 628 aa14.16□□□□□ -0.14
IPO4-209ENST00000559588 IFT140Q96RY7 1462 aa14.16□□□□□ -0.14
IPO4-209ENST00000559588 TRIM44Q96DX7 344 aaPredicted RBP14.16□□□□□ -0.14
IPO4-209ENST00000559588 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
IPO4-209ENST00000559588 TCERG1O14776 1098 aaKnown RBP14.15□□□□□ -0.14
IPO4-209ENST00000559588 SKAP1Q86WV1 359 aa14.15□□□□□ -0.14
IPO4-209ENST00000559588 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
IPO4-209ENST00000559588 LRRC9Q6ZRR7 1453 aa14.14□□□□□ -0.15
IPO4-209ENST00000559588 L1TD1Q5T7N2 865 aaKnown RBP14.14□□□□□ -0.15
IPO4-209ENST00000559588 SLKQ9H2G2 1235 aaPredicted RBP14.14□□□□□ -0.15
IPO4-209ENST00000559588 ZHX1Q9UKY1 873 aaPredicted RBP14.14□□□□□ -0.15
IPO4-209ENST00000559588 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
IPO4-209ENST00000559588 POGKQ9P215 609 aa14.13□□□□□ -0.15
IPO4-209ENST00000559588 CHMP4BQ9H444 224 aaKnown RBP14.12□□□□□ -0.15
IPO4-209ENST00000559588 FAM13BQ9NYF5 915 aa14.12□□□□□ -0.15
IPO4-209ENST00000559588 EIF4G2P78344 907 aaKnown RBP eCLIP14.11□□□□□ -0.15
IPO4-209ENST00000559588 PAXIP1Q6ZW49 1069 aaPredicted RBP14.1□□□□□ -0.15
IPO4-209ENST00000559588 PRDM10Q9NQV6 1147 aa14.09□□□□□ -0.15
IPO4-209ENST00000559588 AKNAQ7Z591 1439 aa14.09□□□□□ -0.15
IPO4-209ENST00000559588 TIAM1Q13009 1591 aa14.09□□□□□ -0.15
IPO4-209ENST00000559588 ZBED9Q6R2W3 1325 aa14.08□□□□□ -0.16
IPO4-209ENST00000559588 CANXP27824 592 aaKnown RBP14.08□□□□□ -0.16
IPO4-209ENST00000559588 EXOC6Q8TAG9 804 aa14.08□□□□□ -0.16
IPO4-209ENST00000559588 BACH2Q9BYV9 841 aa14.08□□□□□ -0.16
IPO4-209ENST00000559588 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
IPO4-209ENST00000559588 L3MBTL2Q969R5 705 aa14.07□□□□□ -0.16
IPO4-209ENST00000559588 FMN1Q68DA7 1419 aa14.07□□□□□ -0.16
IPO4-209ENST00000559588 GOLGA6L3A6NEY3 463 aa14.07□□□□□ -0.16
IPO4-209ENST00000559588 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
IPO4-209ENST00000559588 PLCD3Q8N3E9 789 aa14.06□□□□□ -0.16
IPO4-209ENST00000559588 CCDC18Q5T9S5 1454 aa14.05□□□□□ -0.16
IPO4-209ENST00000559588 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
IPO4-209ENST00000559588 TNNT2P45379 298 aaPredicted RBP14.04□□□□□ -0.16
IPO4-209ENST00000559588 ZBTB7CA1YPR0 619 aa14.03□□□□□ -0.16
IPO4-209ENST00000559588 PDCL3Q9H2J4 239 aa14.03□□□□□ -0.16
IPO4-209ENST00000559588 PRKRIP1Q9H875 184 aaPredicted RBP14.02□□□□□ -0.16
IPO4-209ENST00000559588 PLEKHD1A6NEE1 506 aa14.02□□□□□ -0.17
IPO4-209ENST00000559588 PTPRKQ15262 1439 aa14.02□□□□□ -0.17
IPO4-209ENST00000559588 CDK11BP21127 795 aaKnown RBP14.02□□□□□ -0.17
IPO4-209ENST00000559588 MYH16Q9H6N6 1097 aa14.01□□□□□ -0.17
IPO4-209ENST00000559588 PANK2Q9BZ23 570 aa14.01□□□□□ -0.17
IPO4-209ENST00000559588 NUDCQ9Y266 331 aa14.01□□□□□ -0.17
IPO4-209ENST00000559588 WDR62O43379 1518 aa14□□□□□ -0.17
IPO4-209ENST00000559588 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
IPO4-209ENST00000559588 ANP32BQ92688 251 aaKnown RBP13.99□□□□□ -0.17
IPO4-209ENST00000559588 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
IPO4-209ENST00000559588 CUL7Q14999 1698 aa13.98□□□□□ -0.17
IPO4-209ENST00000559588 PCF11O94913 1555 aaKnown RBP13.98□□□□□ -0.17
IPO4-209ENST00000559588 FGD6Q6ZV73 1430 aa13.98□□□□□ -0.17
IPO4-209ENST00000559588 CLCN1P35523 988 aa13.98□□□□□ -0.17
IPO4-209ENST00000559588 MPHOSPH9Q99550 1183 aa13.98□□□□□ -0.17
IPO4-209ENST00000559588 VGLL3A8MV65 326 aa13.97□□□□□ -0.17
IPO4-209ENST00000559588 GRIN2AQ12879 1464 aa13.97□□□□□ -0.17
IPO4-209ENST00000559588 KIAA1211Q6ZU35 1233 aa13.97□□□□□ -0.17
IPO4-209ENST00000559588 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
IPO4-209ENST00000559588 CFDP1Q9UEE9 299 aaPredicted RBP13.97□□□□□ -0.17
IPO4-209ENST00000559588 CALD1Q05682 793 aaKnown RBP13.96□□□□□ -0.17
IPO4-209ENST00000559588 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
IPO4-209ENST00000559588 CNTLNQ9NXG0 1405 aa13.96□□□□□ -0.17
IPO4-209ENST00000559588 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.18
IPO4-209ENST00000559588 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
IPO4-209ENST00000559588 ESPNB1AK53 854 aa13.95□□□□□ -0.18
IPO4-209ENST00000559588 PLIN1O60240 522 aa13.94□□□□□ -0.18
IPO4-209ENST00000559588 TAF7LQ5H9L4 462 aa13.94□□□□□ -0.18
IPO4-209ENST00000559588 CASKIN1Q8WXD9 1431 aa13.94□□□□□ -0.18
IPO4-209ENST00000559588 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
IPO4-209ENST00000559588 NCLP19338 710 aaKnown RBP13.94□□□□□ -0.18
IPO4-209ENST00000559588 TMC1Q8TDI8 760 aa13.94□□□□□ -0.18
IPO4-209ENST00000559588 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms