RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 NPM2Q86SE8 214 aaKnown RBP3.09□□□□□ -1.92
RGPD1-204ENST00000559485 MS4A1P11836 297 aa3.08□□□□□ -1.92
RGPD1-204ENST00000559485 CSPP1Q1MSJ5 1256 aa3.08□□□□□ -1.92
RGPD1-204ENST00000559485 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.08□□□□□ -1.92
RGPD1-204ENST00000559485 ATP1B4Q9UN42 357 aaPredicted RBP3.08□□□□□ -1.92
RGPD1-204ENST00000559485 RAPGEF2Q9Y4G8 1499 aa3.08□□□□□ -1.92
RGPD1-204ENST00000559485 KIF21AQ7Z4S6 1674 aa3.08□□□□□ -1.92
RGPD1-204ENST00000559485 ATAD2BQ9ULI0 1458 aa3.08□□□□□ -1.92
RGPD1-204ENST00000559485 BRD2P25440 801 aaKnown RBP3.08□□□□□ -1.92
RGPD1-204ENST00000559485 FMN1Q68DA7 1419 aa3.08□□□□□ -1.92
RGPD1-204ENST00000559485 CNTLNQ9NXG0 1405 aa3.08□□□□□ -1.92
RGPD1-204ENST00000559485 SALL2Q9Y467 1007 aaPredicted RBP3.08□□□□□ -1.92
RGPD1-204ENST00000559485 UACAQ9BZF9 1416 aa3.08□□□□□ -1.92
RGPD1-204ENST00000559485 PHLDB1Q86UU1 1377 aa3.08□□□□□ -1.92
RGPD1-204ENST00000559485 GOLGA6L6A8MZA4 724 aa3.07□□□□□ -1.92
RGPD1-204ENST00000559485 GOLGA6L22H0YM25 854 aa3.07□□□□□ -1.92
RGPD1-204ENST00000559485 NPM3O75607 178 aaKnown RBP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 DDX10Q13206 875 aaKnown RBP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 CENPJQ9HC77 1338 aaPredicted RBP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 LRRC9Q6ZRR7 1453 aa3.07□□□□□ -1.92
RGPD1-204ENST00000559485 HMGXB3Q12766 1538 aa3.07□□□□□ -1.92
RGPD1-204ENST00000559485 EIF4G2P78344 907 aaKnown RBP eCLIP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 MSH5O43196 834 aa3.07□□□□□ -1.92
RGPD1-204ENST00000559485 PPP1R15AO75807 674 aaPredicted RBP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 MSNP26038 577 aaKnown RBP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 AKNAQ7Z591 1439 aa3.07□□□□□ -1.92
RGPD1-204ENST00000559485 SMG6Q86US8 1419 aaKnown RBP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 BCCIPQ9P287 314 aaKnown RBP eCLIP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.07□□□□□ -1.92
RGPD1-204ENST00000559485 PDCL3Q9H2J4 239 aa3.07□□□□□ -1.92
RGPD1-204ENST00000559485 CCDC66A2RUB6 948 aa3.06□□□□□ -1.92
RGPD1-204ENST00000559485 MAPKBP1O60336 1514 aa3.06□□□□□ -1.92
RGPD1-204ENST00000559485 PDE3BQ13370 1112 aa3.06□□□□□ -1.92
RGPD1-204ENST00000559485 FAM50AQ14320 339 aaKnown RBP3.06□□□□□ -1.92
RGPD1-204ENST00000559485 EHBP1L1Q8N3D4 1523 aa3.06□□□□□ -1.92
RGPD1-204ENST00000559485 PLEKHH2Q8IVE3 1493 aa3.06□□□□□ -1.92
RGPD1-204ENST00000559485 PRDM2Q13029 1718 aa3.06□□□□□ -1.92
RGPD1-204ENST00000559485 CUL7Q14999 1698 aa3.06□□□□□ -1.92
RGPD1-204ENST00000559485 CHAF1AQ13111 956 aaPredicted RBP3.06□□□□□ -1.92
RGPD1-204ENST00000559485 CASKIN1Q8WXD9 1431 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 SMAP1Q8IYB5 467 aaPredicted RBP3.05□□□□□ -1.92
RGPD1-204ENST00000559485 CCDC144AA2RUR9 1427 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 NCOA2Q15596 1464 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 SLC4A2P04920 1241 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 SKOR2Q2VWA4 1001 aaPredicted RBP3.05□□□□□ -1.92
RGPD1-204ENST00000559485 POTEHQ6S545 545 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 INSRP06213 1382 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 EIF3AQ14152 1382 aaKnown RBP3.05□□□□□ -1.92
RGPD1-204ENST00000559485 CC2D2AQ9P2K1 1620 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 HFM1A2PYH4 1435 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 GOLGA6L1Q8N7Z2 621 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 CFAP44Q96MT7 982 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 ZMYND15Q9H091 742 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 NUDCQ9Y266 331 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 UNC13AQ9UPW8 1703 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 HECW1Q76N89 1606 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 APPP05067 770 aa3.05□□□□□ -1.92
RGPD1-204ENST00000559485 DDX11L8A8MPP1 907 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 FGD1P98174 961 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 IPO4Q8TEX9 1081 aaKnown RBP3.04□□□□□ -1.92
RGPD1-204ENST00000559485 GTPBP4Q9BZE4 634 aaKnown RBP3.04□□□□□ -1.92
RGPD1-204ENST00000559485 SUPT6HQ7KZ85 1726 aaKnown RBP3.04□□□□□ -1.92
RGPD1-204ENST00000559485 RUSC2Q8N2Y8 1516 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 NCAPD3P42695 1498 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 MIA2Q96PC5 1412 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 TERF1P54274 439 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 NOM1Q5C9Z4 860 aaKnown RBP3.04□□□□□ -1.92
RGPD1-204ENST00000559485 MRS2Q9HD23 443 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 WDR97A6NE52 1622 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 ABCA5Q8WWZ7 1642 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 BICRAQ9NZM4 1560 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 ZMYM4Q5VZL5 1548 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 VGFO15240 615 aaPredicted RBP3.04□□□□□ -1.92
RGPD1-204ENST00000559485 DNTTIP2Q5QJE6 756 aaKnown RBP3.04□□□□□ -1.92
RGPD1-204ENST00000559485 TRIM52Q96A61 297 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 CLGNO14967 610 aa3.04□□□□□ -1.92
RGPD1-204ENST00000559485 LETM1O95202 739 aaPredicted RBP3.04□□□□□ -1.92
RGPD1-204ENST00000559485 RBM28Q9NW13 759 aaKnown RBP3.03□□□□□ -1.92
RGPD1-204ENST00000559485 MTUS2Q5JR59 1369 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 WASHC2CQ9Y4E1 1318 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 FGD5Q6ZNL6 1462 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 ITGAEP38570 1179 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 AAMPQ13685 434 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 RALBP1Q15311 655 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 DNAJC2Q99543 621 aaKnown RBP3.03□□□□□ -1.92
RGPD1-204ENST00000559485 TNNT3P45378 269 aaPredicted RBP3.03□□□□□ -1.92
RGPD1-204ENST00000559485 SETQ01105 290 aaPredicted RBP3.03□□□□□ -1.92
RGPD1-204ENST00000559485 FGD6Q6ZV73 1430 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 KIF3AQ9Y496 699 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 GCC2Q8IWJ2 1684 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 PTPN23Q9H3S7 1636 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 WASHC2AQ641Q2 1341 aa3.03□□□□□ -1.92
RGPD1-204ENST00000559485 NINLQ9Y2I6 1382 aa3.03□□□□□ -1.93
RGPD1-204ENST00000559485 FAM193AP78312 1265 aa3.02□□□□□ -1.93
RGPD1-204ENST00000559485 UTP14CQ5TAP6 766 aaKnown RBP3.02□□□□□ -1.93
RGPD1-204ENST00000559485 KIF15Q9NS87 1388 aa3.02□□□□□ -1.93
RGPD1-204ENST00000559485 POLR1AO95602 1720 aaPredicted RBP3.02□□□□□ -1.93
RGPD1-204ENST00000559485 MYOM3Q5VTT5 1437 aa3.02□□□□□ -1.93
RGPD1-204ENST00000559485 RBM10P98175 930 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms