RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 ARHGEF40Q8TER5 1519 aa28.52■■■□□ 2.16
TPM1-218ENST00000559281 MYO5CQ9NQX4 1742 aa28.51■■■□□ 2.15
TPM1-218ENST00000559281 ZFYVE16Q7Z3T8 1539 aa28.49■■■□□ 2.15
TPM1-218ENST00000559281 YEATS2Q9ULM3 1422 aa28.49■■■□□ 2.15
TPM1-218ENST00000559281 LRRIQ1Q96JM4 1722 aa28.48■■■□□ 2.15
TPM1-218ENST00000559281 AFAP1Q8N556 730 aa28.47■■■□□ 2.15
TPM1-218ENST00000559281 MYT1LQ9UL68 1186 aa28.47■■■□□ 2.15
TPM1-218ENST00000559281 PTPRMP28827 1452 aa28.46■■■□□ 2.15
TPM1-218ENST00000559281 ZNF518AQ6AHZ1 1483 aa28.45■■■□□ 2.14
TPM1-218ENST00000559281 ADAMTSL3P82987 1691 aa28.45■■■□□ 2.14
TPM1-218ENST00000559281 CEP162Q5TB80 1403 aa28.42■■■□□ 2.14
TPM1-218ENST00000559281 ATP10AO60312 1499 aa28.41■■■□□ 2.14
TPM1-218ENST00000559281 BCORL1Q5H9F3 1711 aa28.41■■■□□ 2.14
TPM1-218ENST00000559281 MLECQ14165 292 aa28.39■■■□□ 2.14
TPM1-218ENST00000559281 MTUS2Q5JR59 1369 aa28.38■■■□□ 2.13
TPM1-218ENST00000559281 HECW2Q9P2P5 1572 aa28.38■■■□□ 2.13
TPM1-218ENST00000559281 ZNF777Q9ULD5 760 aaPredicted RBP28.37■■■□□ 2.13
TPM1-218ENST00000559281 C9orf84Q5VXU9 1444 aa28.36■■■□□ 2.13
TPM1-218ENST00000559281 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
TPM1-218ENST00000559281 CFDP1Q9UEE9 299 aaPredicted RBP28.33■■■□□ 2.13
TPM1-218ENST00000559281 PREX2Q70Z35 1606 aa28.32■■■□□ 2.12
TPM1-218ENST00000559281 MADDQ8WXG6 1647 aa28.32■■■□□ 2.12
TPM1-218ENST00000559281 CCNB3Q8WWL7 1395 aa28.32■■■□□ 2.12
TPM1-218ENST00000559281 CDC42BPBQ9Y5S2 1711 aa28.32■■■□□ 2.12
TPM1-218ENST00000559281 GPATCH8Q9UKJ3 1502 aaKnown RBP28.31■■■□□ 2.12
TPM1-218ENST00000559281 KDM5CP41229 1560 aa28.3■■■□□ 2.12
TPM1-218ENST00000559281 MLH3Q9UHC1 1453 aa28.3■■■□□ 2.12
TPM1-218ENST00000559281 TRAPPC8Q9Y2L5 1435 aa28.3■■■□□ 2.12
TPM1-218ENST00000559281 ABCC1P33527 1531 aa28.28■■■□□ 2.12
TPM1-218ENST00000559281 PLPPR3Q6T4P5 718 aa28.27■■■□□ 2.12
TPM1-218ENST00000559281 ARHGEF12Q9NZN5 1544 aa28.27■■■□□ 2.12
TPM1-218ENST00000559281 HNRNPMP52272 730 aaKnown RBP eCLIP28.24■■■□□ 2.11
TPM1-218ENST00000559281 PLEKHH2Q8IVE3 1493 aa28.21■■■□□ 2.11
TPM1-218ENST00000559281 CDC42BPAQ5VT25 1732 aa28.21■■■□□ 2.11
TPM1-218ENST00000559281 KIAA1107Q9UPP5 1409 aa28.21■■■□□ 2.11
TPM1-218ENST00000559281 RIMS1Q86UR5 1692 aaKnown RBP28.21■■■□□ 2.11
TPM1-218ENST00000559281 SPAG9O60271 1321 aaKnown RBP28.2■■■□□ 2.11
TPM1-218ENST00000559281 SIGLEC1Q9BZZ2 1709 aa28.19■■■□□ 2.1
TPM1-218ENST00000559281 ESF1Q9H501 851 aaKnown RBP28.18■■■□□ 2.1
TPM1-218ENST00000559281 EHBP1L1Q8N3D4 1523 aa28.17■■■□□ 2.1
TPM1-218ENST00000559281 DIP2CQ9Y2E4 1556 aa28.16■■■□□ 2.1
TPM1-218ENST00000559281 ITSN2Q9NZM3 1697 aa28.16■■■□□ 2.1
TPM1-218ENST00000559281 SAMD9LQ8IVG5 1584 aa28.15■■■□□ 2.1
TPM1-218ENST00000559281 REREQ9P2R6 1566 aa28.15■■■□□ 2.1
TPM1-218ENST00000559281 SYCP2Q9BX26 1530 aa28.13■■■□□ 2.09
TPM1-218ENST00000559281 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
TPM1-218ENST00000559281 LMTK3Q96Q04 1460 aa28.11■■■□□ 2.09
TPM1-218ENST00000559281 AGLP35573 1532 aa28.11■■■□□ 2.09
TPM1-218ENST00000559281 CEBPAP49715 358 aaPredicted RBP28.1■■■□□ 2.09
TPM1-218ENST00000559281 ABCA6Q8N139 1617 aa28.1■■■□□ 2.09
TPM1-218ENST00000559281 ZNF644Q9H582 1327 aaPredicted RBP28.09■■■□□ 2.09
TPM1-218ENST00000559281 FER1L4A9Z1Z3 1794 aa28.08■■■□□ 2.09
TPM1-218ENST00000559281 KIDINS220Q9ULH0 1771 aa28.06■■■□□ 2.08
TPM1-218ENST00000559281 HSPA2P54652 639 aa28.05■■■□□ 2.08
TPM1-218ENST00000559281 TIAM1Q13009 1591 aa28.05■■■□□ 2.08
TPM1-218ENST00000559281 RSPH4AQ5TD94 716 aa28.05■■■□□ 2.08
TPM1-218ENST00000559281 NCOA2Q15596 1464 aa28.03■■■□□ 2.08
TPM1-218ENST00000559281 ILDR1Q86SU0 546 aaPredicted RBP28■■■□□ 2.07
TPM1-218ENST00000559281 ATP7AQ04656 1500 aa28■■■□□ 2.07
TPM1-218ENST00000559281 CNTLNQ9NXG0 1405 aa28■■■□□ 2.07
TPM1-218ENST00000559281 MBD5Q9P267 1494 aa27.99■■■□□ 2.07
TPM1-218ENST00000559281 APLP2Q06481 763 aa27.98■■■□□ 2.07
TPM1-218ENST00000559281 A2MP01023 1474 aa27.97■■■□□ 2.07
TPM1-218ENST00000559281 LRRC9Q6ZRR7 1453 aa27.97■■■□□ 2.07
TPM1-218ENST00000559281 SUPT6HQ7KZ85 1726 aaKnown RBP27.97■■■□□ 2.07
TPM1-218ENST00000559281 RTEL1-TNFRSF6BF6WH68 1400 aa27.96■■■□□ 2.07
TPM1-218ENST00000559281 MAP3K1Q13233 1512 aa27.94■■■□□ 2.06
TPM1-218ENST00000559281 TSPY4P0CV99 314 aa27.93■■■□□ 2.06
TPM1-218ENST00000559281 TSPY10P0CW01 314 aa27.93■■■□□ 2.06
TPM1-218ENST00000559281 KANK4Q5T7N3 995 aaPredicted RBP27.93■■■□□ 2.06
TPM1-218ENST00000559281 GGT6Q6P531 493 aa27.93■■■□□ 2.06
TPM1-218ENST00000559281 PPP6R1Q9UPN7 881 aa27.93■■■□□ 2.06
TPM1-218ENST00000559281 INO80Q9ULG1 1556 aaPredicted RBP27.92■■■□□ 2.06
TPM1-218ENST00000559281 UHRF1BP1Q6BDS2 1440 aa27.92■■■□□ 2.06
TPM1-218ENST00000559281 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.05
TPM1-218ENST00000559281 CCDC141Q6ZP82 1450 aa27.89■■■□□ 2.05
TPM1-218ENST00000559281 ZMYM3Q14202 1370 aa27.88■■■□□ 2.05
TPM1-218ENST00000559281 DHX29Q7Z478 1369 aaKnown RBP27.87■■■□□ 2.05
TPM1-218ENST00000559281 DMRT2Q9Y5R5 561 aa27.86■■■□□ 2.05
TPM1-218ENST00000559281 SETD1BQ9UPS6 1966 aaKnown RBP27.86■■■□□ 2.05
TPM1-218ENST00000559281 PLXNC1O60486 1568 aa27.84■■■□□ 2.05
TPM1-218ENST00000559281 PREX1Q8TCU6 1659 aa27.84■■■□□ 2.05
TPM1-218ENST00000559281 KIF3BO15066 747 aa27.81■■■□□ 2.04
TPM1-218ENST00000559281 NPATQ14207 1427 aa27.81■■■□□ 2.04
TPM1-218ENST00000559281 MIA2Q96PC5 1412 aa27.81■■■□□ 2.04
TPM1-218ENST00000559281 C3P01024 1663 aa27.8■■■□□ 2.04
TPM1-218ENST00000559281 ADGBQ8N7X0 1667 aa27.79■■■□□ 2.04
TPM1-218ENST00000559281 MYOM3Q5VTT5 1437 aa27.78■■■□□ 2.04
TPM1-218ENST00000559281 FBXO41Q8TF61 875 aa27.78■■■□□ 2.04
TPM1-218ENST00000559281 ARHGEF5Q12774 1597 aa27.76■■■□□ 2.03
TPM1-218ENST00000559281 MROH2AA6NES4 1674 aa27.73■■■□□ 2.03
TPM1-218ENST00000559281 WASHC2CQ9Y4E1 1318 aa27.7■■■□□ 2.03
TPM1-218ENST00000559281 PTPRKQ15262 1439 aa27.68■■■□□ 2.02
TPM1-218ENST00000559281 CLTCQ00610 1675 aaKnown RBP27.66■■■□□ 2.02
TPM1-218ENST00000559281 CERKQ8TCT0 537 aa27.66■■■□□ 2.02
TPM1-218ENST00000559281 PTPRTO14522 1441 aa27.62■■■□□ 2.01
TPM1-218ENST00000559281 FAM135AQ9P2D6 1515 aa27.61■■■□□ 2.01
TPM1-218ENST00000559281 MAST1Q9Y2H9 1570 aa27.6■■■□□ 2.01
TPM1-218ENST00000559281 NCOA1Q15788 1441 aa27.59■■■□□ 2.01
TPM1-218ENST00000559281 KDM5DQ9BY66 1539 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms