RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 TPRNQ4KMQ1 711 aa4.89□□□□□ -1.63
GABPB1-209ENST00000559100 KDM2AQ9Y2K7 1162 aa4.89□□□□□ -1.63
GABPB1-209ENST00000559100 TSHZ2Q9NRE2 1034 aa4.87□□□□□ -1.63
GABPB1-209ENST00000559100 IFFO2Q5TF58 517 aa4.85□□□□□ -1.63
GABPB1-209ENST00000559100 NBR1Q14596 966 aa4.84□□□□□ -1.63
GABPB1-209ENST00000559100 LAPTM4AQ15012 233 aa4.84□□□□□ -1.63
GABPB1-209ENST00000559100 DOK7Q18PE1 504 aa4.84□□□□□ -1.63
GABPB1-209ENST00000559100 TRIM41Q8WV44 630 aa4.84□□□□□ -1.63
GABPB1-209ENST00000559100 PCDHB13Q9Y5F0 798 aa4.84□□□□□ -1.63
GABPB1-209ENST00000559100 GSE1Q14687 1217 aa4.82□□□□□ -1.64
GABPB1-209ENST00000559100 L3MBTL3Q96JM7 780 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-209ENST00000559100 RIMBP2O15034 1052 aa4.8□□□□□ -1.64
GABPB1-209ENST00000559100 DCAF8Q5TAQ9 597 aa4.8□□□□□ -1.64
GABPB1-209ENST00000559100 HS6ST3Q8IZP7 471 aa4.8□□□□□ -1.64
GABPB1-209ENST00000559100 SGIP1Q9BQI5 828 aa4.8□□□□□ -1.64
GABPB1-209ENST00000559100 STK17AQ9UEE5 414 aa4.79□□□□□ -1.64
GABPB1-209ENST00000559100 PDCD7Q8N8D1 485 aaKnown RBP4.78□□□□□ -1.64
GABPB1-209ENST00000559100 RIOK3O14730 519 aaKnown RBP4.77□□□□□ -1.65
GABPB1-209ENST00000559100 STK25O00506 426 aa4.76□□□□□ -1.65
GABPB1-209ENST00000559100 IFNL1Q8IU54 200 aa4.76□□□□□ -1.65
GABPB1-209ENST00000559100 FAM212AQ96EL1 285 aa4.76□□□□□ -1.65
GABPB1-209ENST00000559100 GFRA3O60609 400 aa4.75□□□□□ -1.65
GABPB1-209ENST00000559100 RNF25Q96BH1 459 aaPredicted RBP4.75□□□□□ -1.65
GABPB1-209ENST00000559100 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
GABPB1-209ENST00000559100 NUBP1P53384 320 aa4.73□□□□□ -1.65
GABPB1-209ENST00000559100 VGFO15240 615 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-209ENST00000559100 KCTD12Q96CX2 325 aaKnown RBP4.72□□□□□ -1.65
GABPB1-209ENST00000559100 STK24Q9Y6E0 443 aa4.72□□□□□ -1.65
GABPB1-209ENST00000559100 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-209ENST00000559100 NKX1-1Q15270 411 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-209ENST00000559100 GTPBP6O43824 516 aaPredicted RBP4.7□□□□□ -1.66
GABPB1-209ENST00000559100 KRTAP1-3Q8IUG1 177 aa4.7□□□□□ -1.66
GABPB1-209ENST00000559100 BCL11BQ9C0K0 894 aaPredicted RBP4.7□□□□□ -1.66
GABPB1-209ENST00000559100 DNAJC5Q9H3Z4 198 aa4.7□□□□□ -1.66
GABPB1-209ENST00000559100 RYDENQ9NUL5 291 aaKnown RBP4.7□□□□□ -1.66
GABPB1-209ENST00000559100 PBX2P40425 430 aa4.69□□□□□ -1.66
GABPB1-209ENST00000559100 TREML4Q6UXN2 200 aa4.69□□□□□ -1.66
GABPB1-209ENST00000559100 RASEFQ8IZ41 740 aa4.69□□□□□ -1.66
GABPB1-209ENST00000559100 ZSWIM6Q9HCJ5 1215 aa4.69□□□□□ -1.66
GABPB1-209ENST00000559100 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.68□□□□□ -1.66
GABPB1-209ENST00000559100 PYGBP11216 843 aa4.68□□□□□ -1.66
GABPB1-209ENST00000559100 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
GABPB1-209ENST00000559100 ZFP91Q96JP5 570 aaPredicted RBP4.68□□□□□ -1.66
GABPB1-209ENST00000559100 GPR153Q6NV75 609 aa4.67□□□□□ -1.66
GABPB1-209ENST00000559100 ADGRD1Q6QNK2 874 aa4.67□□□□□ -1.66
GABPB1-209ENST00000559100 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
GABPB1-209ENST00000559100 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
GABPB1-209ENST00000559100 CHRM1P11229 460 aaPredicted RBP4.66□□□□□ -1.66
GABPB1-209ENST00000559100 PTPN5P54829 565 aa4.66□□□□□ -1.66
GABPB1-209ENST00000559100 POTEEQ6S8J3 1075 aa4.66□□□□□ -1.66
GABPB1-209ENST00000559100 WDR70Q9NW82 654 aa4.66□□□□□ -1.66
GABPB1-209ENST00000559100 AXIN2Q9Y2T1 843 aa4.66□□□□□ -1.66
GABPB1-209ENST00000559100 P3H3Q8IVL6 736 aa4.65□□□□□ -1.67
GABPB1-209ENST00000559100 ZNF316A6NFI3 1004 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-209ENST00000559100 NRG2O14511 850 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-209ENST00000559100 TULP1O00294 542 aaPredicted RBP4.61□□□□□ -1.67
GABPB1-209ENST00000559100 XP32Q5T750 250 aa4.61□□□□□ -1.67
GABPB1-209ENST00000559100 ZNF467Q7Z7K2 595 aaPredicted RBP4.61□□□□□ -1.67
GABPB1-209ENST00000559100 INSM1Q01101 510 aaPredicted RBP4.6□□□□□ -1.67
GABPB1-209ENST00000559100 G3V3G9 751 aa4.59□□□□□ -1.67
GABPB1-209ENST00000559100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.59□□□□□ -1.67
GABPB1-209ENST00000559100 GTF3C3Q9Y5Q9 886 aa4.59□□□□□ -1.67
GABPB1-209ENST00000559100 PDAP1Q13442 181 aaKnown RBP4.58□□□□□ -1.68
GABPB1-209ENST00000559100 ARSIQ5FYB1 569 aa4.58□□□□□ -1.68
GABPB1-209ENST00000559100 PCDHB8Q9UN66 801 aa4.58□□□□□ -1.68
GABPB1-209ENST00000559100 HRO43593 1189 aa4.57□□□□□ -1.68
GABPB1-209ENST00000559100 MKRN3Q13064 507 aaKnown RBP4.57□□□□□ -1.68
GABPB1-209ENST00000559100 KCNV2Q8TDN2 545 aa4.57□□□□□ -1.68
GABPB1-209ENST00000559100 TIMELESSQ9UNS1 1208 aa4.57□□□□□ -1.68
GABPB1-209ENST00000559100 PSEN1P49768 467 aa4.56□□□□□ -1.68
GABPB1-209ENST00000559100 LMOD2Q6P5Q4 547 aa4.56□□□□□ -1.68
GABPB1-209ENST00000559100 CADPS2Q86UW7 1296 aa4.56□□□□□ -1.68
GABPB1-209ENST00000559100 ERICH6Q7L0X2 663 aa4.55□□□□□ -1.68
GABPB1-209ENST00000559100 PSMG3-AS1Q96PY0 264 aa4.55□□□□□ -1.68
GABPB1-209ENST00000559100 BOLA1Q9Y3E2 137 aa4.55□□□□□ -1.68
GABPB1-209ENST00000559100 GOLGA2Q08379 1002 aa4.54□□□□□ -1.68
GABPB1-209ENST00000559100 TMEM132AQ24JP5 1023 aa4.54□□□□□ -1.68
GABPB1-209ENST00000559100 DPY19L2Q6NUT2 758 aa4.54□□□□□ -1.68
GABPB1-209ENST00000559100 STAC3Q96MF2 364 aa4.54□□□□□ -1.68
GABPB1-209ENST00000559100 KHSRPQ92945 711 aaKnown RBP eCLIP4.53□□□□□ -1.68
GABPB1-209ENST00000559100 POTECB2RU33 542 aa4.52□□□□□ -1.69
GABPB1-209ENST00000559100 TK2O00142 265 aa4.52□□□□□ -1.69
GABPB1-209ENST00000559100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.52□□□□□ -1.69
GABPB1-209ENST00000559100 C14orf37Q86TY3 774 aa4.52□□□□□ -1.69
GABPB1-209ENST00000559100 MFRPQ9BY79 579 aa4.52□□□□□ -1.69
GABPB1-209ENST00000559100 CABP2Q9NPB3 220 aa4.52□□□□□ -1.69
GABPB1-209ENST00000559100 WIPF1O43516 503 aa4.51□□□□□ -1.69
GABPB1-209ENST00000559100 NLRP6P59044 892 aa4.51□□□□□ -1.69
GABPB1-209ENST00000559100 E2F4Q16254 413 aa4.51□□□□□ -1.69
GABPB1-209ENST00000559100 ARHGEF1Q92888 912 aaKnown RBP4.51□□□□□ -1.69
GABPB1-209ENST00000559100 WFS1O76024 890 aa4.5□□□□□ -1.69
GABPB1-209ENST00000559100 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
GABPB1-209ENST00000559100 EFCAB3Q8N7B9 438 aa4.5□□□□□ -1.69
GABPB1-209ENST00000559100 ANO8Q9HCE9 1232 aaPredicted RBP4.5□□□□□ -1.69
GABPB1-209ENST00000559100 SOX12O15370 315 aa4.49□□□□□ -1.69
GABPB1-209ENST00000559100 PPP1R37O75864 691 aa4.49□□□□□ -1.69
GABPB1-209ENST00000559100 NEUROD2Q15784 382 aa4.49□□□□□ -1.69
GABPB1-209ENST00000559100 ARHGAP33O14559 1287 aa4.48□□□□□ -1.69
GABPB1-209ENST00000559100 SEMA3EO15041 775 aa4.48□□□□□ -1.69
GABPB1-209ENST00000559100 SMYD5Q6GMV2 418 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms