RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 SHROOM2Q13796 1616 aa12.89□□□□□ -0.35
COPS2-206ENST00000559016 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
COPS2-206ENST00000559016 PHLDB1Q86UU1 1377 aa12.87□□□□□ -0.35
COPS2-206ENST00000559016 ARHGEF11O15085 1522 aa12.87□□□□□ -0.35
COPS2-206ENST00000559016 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
COPS2-206ENST00000559016 CDK11AQ9UQ88 783 aaPredicted RBP12.84□□□□□ -0.35
COPS2-206ENST00000559016 NUP153P49790 1475 aaKnown RBP12.84□□□□□ -0.35
COPS2-206ENST00000559016 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
COPS2-206ENST00000559016 ABCA8O94911 1581 aa12.83□□□□□ -0.36
COPS2-206ENST00000559016 MYOM3Q5VTT5 1437 aa12.82□□□□□ -0.36
COPS2-206ENST00000559016 FGD6Q6ZV73 1430 aa12.82□□□□□ -0.36
COPS2-206ENST00000559016 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
COPS2-206ENST00000559016 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
COPS2-206ENST00000559016 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
COPS2-206ENST00000559016 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
COPS2-206ENST00000559016 MAGI3Q5TCQ9 1506 aa12.82□□□□□ -0.36
COPS2-206ENST00000559016 PRG4Q92954 1404 aaPredicted RBP12.81□□□□□ -0.36
COPS2-206ENST00000559016 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
COPS2-206ENST00000559016 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
COPS2-206ENST00000559016 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
COPS2-206ENST00000559016 CDK13Q14004 1512 aaKnown RBP12.8□□□□□ -0.36
COPS2-206ENST00000559016 ADCY10Q96PN6 1610 aa12.79□□□□□ -0.36
COPS2-206ENST00000559016 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
COPS2-206ENST00000559016 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
COPS2-206ENST00000559016 PTPRGP23470 1445 aa12.77□□□□□ -0.37
COPS2-206ENST00000559016 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.37
COPS2-206ENST00000559016 TROQ12816 1431 aaPredicted RBP12.76□□□□□ -0.37
COPS2-206ENST00000559016 ITSN2Q9NZM3 1697 aa12.75□□□□□ -0.37
COPS2-206ENST00000559016 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
COPS2-206ENST00000559016 FAM50AQ14320 339 aaKnown RBP12.73□□□□□ -0.37
COPS2-206ENST00000559016 ATP10BO94823 1461 aa12.72□□□□□ -0.37
COPS2-206ENST00000559016 UACAQ9BZF9 1416 aa12.71□□□□□ -0.37
COPS2-206ENST00000559016 ACIN1Q9UKV3 1341 aaKnown RBP12.71□□□□□ -0.37
COPS2-206ENST00000559016 PLEKHD1A6NEE1 506 aa12.7□□□□□ -0.38
COPS2-206ENST00000559016 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
COPS2-206ENST00000559016 UHRF1BP1LA0JNW5 1464 aa12.7□□□□□ -0.38
COPS2-206ENST00000559016 AKNAQ7Z591 1439 aa12.69□□□□□ -0.38
COPS2-206ENST00000559016 KIF14Q15058 1648 aa12.69□□□□□ -0.38
COPS2-206ENST00000559016 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
COPS2-206ENST00000559016 ABCC2Q92887 1545 aa12.68□□□□□ -0.38
COPS2-206ENST00000559016 RAB3GAP2Q9H2M9 1393 aa12.68□□□□□ -0.38
COPS2-206ENST00000559016 HFM1A2PYH4 1435 aa12.67□□□□□ -0.38
COPS2-206ENST00000559016 ITGAEP38570 1179 aa12.66□□□□□ -0.38
COPS2-206ENST00000559016 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
COPS2-206ENST00000559016 DNMT1P26358 1616 aaKnown RBP12.65□□□□□ -0.38
COPS2-206ENST00000559016 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
COPS2-206ENST00000559016 GCC2Q8IWJ2 1684 aa12.64□□□□□ -0.39
COPS2-206ENST00000559016 GPATCH8Q9UKJ3 1502 aaKnown RBP12.64□□□□□ -0.39
COPS2-206ENST00000559016 CDC42BPAQ5VT25 1732 aa12.64□□□□□ -0.39
COPS2-206ENST00000559016 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
COPS2-206ENST00000559016 ROCK1Q13464 1354 aa12.62□□□□□ -0.39
COPS2-206ENST00000559016 ARID3CA6NKF2 412 aa12.62□□□□□ -0.39
COPS2-206ENST00000559016 KDM5BQ9UGL1 1544 aa12.62□□□□□ -0.39
COPS2-206ENST00000559016 PTPRKQ15262 1439 aa12.62□□□□□ -0.39
COPS2-206ENST00000559016 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
COPS2-206ENST00000559016 NAIPQ13075 1403 aa12.61□□□□□ -0.39
COPS2-206ENST00000559016 PRKAR2AP13861 404 aaKnown RBP12.6□□□□□ -0.39
COPS2-206ENST00000559016 CFDP1Q9UEE9 299 aaPredicted RBP12.59□□□□□ -0.39
COPS2-206ENST00000559016 DAPK1P53355 1430 aa12.59□□□□□ -0.39
COPS2-206ENST00000559016 CAMSAP2Q08AD1 1489 aa12.59□□□□□ -0.39
COPS2-206ENST00000559016 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
COPS2-206ENST00000559016 CROCC2H7BZ55 1655 aa12.58□□□□□ -0.4
COPS2-206ENST00000559016 ADGBQ8N7X0 1667 aa12.58□□□□□ -0.4
COPS2-206ENST00000559016 PREX2Q70Z35 1606 aa12.58□□□□□ -0.4
COPS2-206ENST00000559016 ABCC5O15440 1437 aa12.56□□□□□ -0.4
COPS2-206ENST00000559016 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
COPS2-206ENST00000559016 CDC42BPBQ9Y5S2 1711 aa12.56□□□□□ -0.4
COPS2-206ENST00000559016 ARHGEF5Q12774 1597 aa12.56□□□□□ -0.4
COPS2-206ENST00000559016 ADGRL2O95490 1459 aa12.55□□□□□ -0.4
COPS2-206ENST00000559016 SHANK2Q9UPX8 1470 aa12.55□□□□□ -0.4
COPS2-206ENST00000559016 MYO5CQ9NQX4 1742 aa12.55□□□□□ -0.4
COPS2-206ENST00000559016 RSPH4AQ5TD94 716 aa12.55□□□□□ -0.4
COPS2-206ENST00000559016 MAPKBP1O60336 1514 aa12.55□□□□□ -0.4
COPS2-206ENST00000559016 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
COPS2-206ENST00000559016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.4
COPS2-206ENST00000559016 ARAP3Q8WWN8 1544 aa12.52□□□□□ -0.4
COPS2-206ENST00000559016 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
COPS2-206ENST00000559016 ZNF644Q9H582 1327 aaPredicted RBP12.5□□□□□ -0.41
COPS2-206ENST00000559016 TTC37Q6PGP7 1564 aa12.5□□□□□ -0.41
COPS2-206ENST00000559016 NCOA1Q15788 1441 aa12.49□□□□□ -0.41
COPS2-206ENST00000559016 KIAA1107Q9UPP5 1409 aa12.49□□□□□ -0.41
COPS2-206ENST00000559016 ANKRD30AQ9BXX3 1397 aa12.49□□□□□ -0.41
COPS2-206ENST00000559016 SAMD9LQ8IVG5 1584 aa12.48□□□□□ -0.41
COPS2-206ENST00000559016 MAST1Q9Y2H9 1570 aa12.48□□□□□ -0.41
COPS2-206ENST00000559016 MBD5Q9P267 1494 aa12.47□□□□□ -0.41
COPS2-206ENST00000559016 PLCH2O75038 1416 aa12.47□□□□□ -0.41
COPS2-206ENST00000559016 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
COPS2-206ENST00000559016 CHIC2Q9UKJ5 165 aa12.47□□□□□ -0.41
COPS2-206ENST00000559016 ARHGAP5Q13017 1502 aa12.47□□□□□ -0.41
COPS2-206ENST00000559016 CCDC141Q6ZP82 1450 aa12.46□□□□□ -0.41
COPS2-206ENST00000559016 WDR7Q9Y4E6 1490 aa12.46□□□□□ -0.41
COPS2-206ENST00000559016 TSPY4P0CV99 314 aa12.46□□□□□ -0.41
COPS2-206ENST00000559016 TSPY10P0CW01 314 aa12.46□□□□□ -0.41
COPS2-206ENST00000559016 EVX2Q03828 476 aa12.46□□□□□ -0.41
COPS2-206ENST00000559016 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
COPS2-206ENST00000559016 ZNF777Q9ULD5 760 aaPredicted RBP12.46□□□□□ -0.41
COPS2-206ENST00000559016 ABCA9Q8IUA7 1624 aa12.45□□□□□ -0.42
COPS2-206ENST00000559016 C9orf84Q5VXU9 1444 aa12.44□□□□□ -0.42
COPS2-206ENST00000559016 KDM6BO15054 1643 aa12.44□□□□□ -0.42
COPS2-206ENST00000559016 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms