RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ITSN2Q9NZM3 1697 aa19.35■□□□□ 0.69
SMAD3-207ENST00000558763 MIA2Q96PC5 1412 aa19.34■□□□□ 0.69
SMAD3-207ENST00000558763 RAB3GAP2Q9H2M9 1393 aa19.34■□□□□ 0.69
SMAD3-207ENST00000558763 MYO5CQ9NQX4 1742 aa19.34■□□□□ 0.69
SMAD3-207ENST00000558763 GPATCH8Q9UKJ3 1502 aaKnown RBP19.34■□□□□ 0.69
SMAD3-207ENST00000558763 PREX2Q70Z35 1606 aa19.32■□□□□ 0.68
SMAD3-207ENST00000558763 SETD5Q9C0A6 1442 aa19.32■□□□□ 0.68
SMAD3-207ENST00000558763 CDC42BPBQ9Y5S2 1711 aa19.31■□□□□ 0.68
SMAD3-207ENST00000558763 FAM69CQ0P6D2 419 aa19.3■□□□□ 0.68
SMAD3-207ENST00000558763 KIF13AQ9H1H9 1805 aa19.29■□□□□ 0.68
SMAD3-207ENST00000558763 GLI2P10070 1586 aa19.29■□□□□ 0.68
SMAD3-207ENST00000558763 ARHGAP5Q13017 1502 aa19.28■□□□□ 0.68
SMAD3-207ENST00000558763 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
SMAD3-207ENST00000558763 MAP3K4Q9Y6R4 1608 aa19.27■□□□□ 0.68
SMAD3-207ENST00000558763 CD109Q6YHK3 1445 aa19.27■□□□□ 0.68
SMAD3-207ENST00000558763 ZNF777Q9ULD5 760 aaPredicted RBP19.26■□□□□ 0.67
SMAD3-207ENST00000558763 PLCH2O75038 1416 aa19.26■□□□□ 0.67
SMAD3-207ENST00000558763 HFM1A2PYH4 1435 aa19.26■□□□□ 0.67
SMAD3-207ENST00000558763 CLSPNQ9HAW4 1339 aa19.26■□□□□ 0.67
SMAD3-207ENST00000558763 ZNF644Q9H582 1327 aaPredicted RBP19.23■□□□□ 0.67
SMAD3-207ENST00000558763 CAMSAP2Q08AD1 1489 aa19.23■□□□□ 0.67
SMAD3-207ENST00000558763 TSPOAP1O95153 1857 aa19.22■□□□□ 0.67
SMAD3-207ENST00000558763 ARAP3Q8WWN8 1544 aa19.22■□□□□ 0.67
SMAD3-207ENST00000558763 DNMT1P26358 1616 aaKnown RBP19.22■□□□□ 0.67
SMAD3-207ENST00000558763 NAIPQ13075 1403 aa19.22■□□□□ 0.67
SMAD3-207ENST00000558763 SAMD9LQ8IVG5 1584 aa19.22■□□□□ 0.67
SMAD3-207ENST00000558763 GCC2Q8IWJ2 1684 aa19.21■□□□□ 0.67
SMAD3-207ENST00000558763 FANCAO15360 1455 aa19.21■□□□□ 0.67
SMAD3-207ENST00000558763 TRHP20396 242 aaPredicted RBP19.21■□□□□ 0.67
SMAD3-207ENST00000558763 AKNAQ7Z591 1439 aa19.19■□□□□ 0.66
SMAD3-207ENST00000558763 EFCAB2Q5VUJ9 269 aa19.19■□□□□ 0.66
SMAD3-207ENST00000558763 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
SMAD3-207ENST00000558763 DAPK1P53355 1430 aa19.17■□□□□ 0.66
SMAD3-207ENST00000558763 CFAP74Q9C0B2 1584 aa19.16■□□□□ 0.66
SMAD3-207ENST00000558763 SYCP2Q9BX26 1530 aa19.16■□□□□ 0.66
SMAD3-207ENST00000558763 ABCC5O15440 1437 aa19.15■□□□□ 0.66
SMAD3-207ENST00000558763 ABCC1P33527 1531 aa19.14■□□□□ 0.66
SMAD3-207ENST00000558763 CROCC2H7BZ55 1655 aa19.14■□□□□ 0.65
SMAD3-207ENST00000558763 KDM6BO15054 1643 aa19.13■□□□□ 0.65
SMAD3-207ENST00000558763 ADGRL1O94910 1474 aa19.12■□□□□ 0.65
SMAD3-207ENST00000558763 HNRNPMP52272 730 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMAD3-207ENST00000558763 PLEKHH2Q8IVE3 1493 aa19.11■□□□□ 0.65
SMAD3-207ENST00000558763 TEX14Q8IWB6 1497 aa19.11■□□□□ 0.65
SMAD3-207ENST00000558763 ARHGEF12Q9NZN5 1544 aa19.11■□□□□ 0.65
SMAD3-207ENST00000558763 NEO1Q92859 1461 aa19.11■□□□□ 0.65
SMAD3-207ENST00000558763 MBD5Q9P267 1494 aa19.09■□□□□ 0.65
SMAD3-207ENST00000558763 ROCK1Q13464 1354 aa19.09■□□□□ 0.65
SMAD3-207ENST00000558763 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.65
SMAD3-207ENST00000558763 SCAPERQ9BY12 1400 aa19.08■□□□□ 0.64
SMAD3-207ENST00000558763 ARHGEF5Q12774 1597 aa19.08■□□□□ 0.64
SMAD3-207ENST00000558763 ADGBQ8N7X0 1667 aa19.07■□□□□ 0.64
SMAD3-207ENST00000558763 CHIC2Q9UKJ5 165 aa19.06■□□□□ 0.64
SMAD3-207ENST00000558763 CCDC141Q6ZP82 1450 aa19.06■□□□□ 0.64
SMAD3-207ENST00000558763 TRAPPC8Q9Y2L5 1435 aa19.06■□□□□ 0.64
SMAD3-207ENST00000558763 RRP7BPQ9NSQ0 103 aa19.04■□□□□ 0.64
SMAD3-207ENST00000558763 ADGRL2O95490 1459 aa19.04■□□□□ 0.64
SMAD3-207ENST00000558763 DENND4BO75064 1496 aaPredicted RBP19.02■□□□□ 0.64
SMAD3-207ENST00000558763 AFAP1Q8N556 730 aa19.02■□□□□ 0.64
SMAD3-207ENST00000558763 SHANK2Q9UPX8 1470 aa19.01■□□□□ 0.63
SMAD3-207ENST00000558763 POGZQ7Z3K3 1410 aa19.01■□□□□ 0.63
SMAD3-207ENST00000558763 C9orf84Q5VXU9 1444 aa19■□□□□ 0.63
SMAD3-207ENST00000558763 ZNF518AQ6AHZ1 1483 aa19■□□□□ 0.63
SMAD3-207ENST00000558763 TSPY4P0CV99 314 aa18.99■□□□□ 0.63
SMAD3-207ENST00000558763 TSPY10P0CW01 314 aa18.99■□□□□ 0.63
SMAD3-207ENST00000558763 RSPH4AQ5TD94 716 aa18.99■□□□□ 0.63
SMAD3-207ENST00000558763 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
SMAD3-207ENST00000558763 RAPGEF3O95398 923 aa18.99■□□□□ 0.63
SMAD3-207ENST00000558763 RICTORQ6R327 1708 aa18.99■□□□□ 0.63
SMAD3-207ENST00000558763 FRMPD1Q5SYB0 1578 aa18.97■□□□□ 0.63
SMAD3-207ENST00000558763 KDM5CP41229 1560 aa18.96■□□□□ 0.63
SMAD3-207ENST00000558763 COL17A1Q9UMD9 1497 aaPredicted RBP18.96■□□□□ 0.63
SMAD3-207ENST00000558763 MAST1Q9Y2H9 1570 aa18.95■□□□□ 0.62
SMAD3-207ENST00000558763 SPAG9O60271 1321 aaKnown RBP18.95■□□□□ 0.62
SMAD3-207ENST00000558763 ZFYVE16Q7Z3T8 1539 aa18.95■□□□□ 0.62
SMAD3-207ENST00000558763 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
SMAD3-207ENST00000558763 INO80Q9ULG1 1556 aaPredicted RBP18.94■□□□□ 0.62
SMAD3-207ENST00000558763 ATP7AQ04656 1500 aa18.93■□□□□ 0.62
SMAD3-207ENST00000558763 HECW2Q9P2P5 1572 aa18.93■□□□□ 0.62
SMAD3-207ENST00000558763 SIN3AQ96ST3 1273 aa18.92■□□□□ 0.62
SMAD3-207ENST00000558763 ANKRD30AQ9BXX3 1397 aa18.92■□□□□ 0.62
SMAD3-207ENST00000558763 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
SMAD3-207ENST00000558763 PLXNC1O60486 1568 aa18.9■□□□□ 0.62
SMAD3-207ENST00000558763 RTEL1-TNFRSF6BF6WH68 1400 aa18.89■□□□□ 0.61
SMAD3-207ENST00000558763 KIF15Q9NS87 1388 aa18.89■□□□□ 0.61
SMAD3-207ENST00000558763 ZMYM4Q5VZL5 1548 aa18.89■□□□□ 0.61
SMAD3-207ENST00000558763 MLH3Q9UHC1 1453 aa18.88■□□□□ 0.61
SMAD3-207ENST00000558763 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
SMAD3-207ENST00000558763 ABCA6Q8N139 1617 aa18.86■□□□□ 0.61
SMAD3-207ENST00000558763 PZPP20742 1482 aa18.86■□□□□ 0.61
SMAD3-207ENST00000558763 YEATS2Q9ULM3 1422 aa18.85■□□□□ 0.61
SMAD3-207ENST00000558763 ANKRD50Q9ULJ7 1429 aa18.84■□□□□ 0.61
SMAD3-207ENST00000558763 DIP2CQ9Y2E4 1556 aa18.83■□□□□ 0.6
SMAD3-207ENST00000558763 MPHOSPH9Q99550 1183 aa18.82■□□□□ 0.6
SMAD3-207ENST00000558763 ACIN1Q9UKV3 1341 aaKnown RBP18.82■□□□□ 0.6
SMAD3-207ENST00000558763 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
SMAD3-207ENST00000558763 DUOX2Q9NRD8 1548 aa18.82■□□□□ 0.6
SMAD3-207ENST00000558763 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
SMAD3-207ENST00000558763 TRIM52Q96A61 297 aa18.81■□□□□ 0.6
SMAD3-207ENST00000558763 MAGI2Q86UL8 1455 aa18.81■□□□□ 0.6
SMAD3-207ENST00000558763 KDM5DQ9BY66 1539 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms