RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 PDS5BQ9NTI5 1447 aa17.44■□□□□ 0.38
MARK3-213ENST00000558611 NEUROD2Q15784 382 aa17.42■□□□□ 0.38
MARK3-213ENST00000558611 SMYD5Q6GMV2 418 aa17.42■□□□□ 0.38
MARK3-213ENST00000558611 CUX2O14529 1486 aa17.42■□□□□ 0.38
MARK3-213ENST00000558611 PRKAR2AP13861 404 aaKnown RBP17.41■□□□□ 0.38
MARK3-213ENST00000558611 SLC24A3Q9HC58 644 aa17.41■□□□□ 0.38
MARK3-213ENST00000558611 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
MARK3-213ENST00000558611 CFTRP13569 1480 aa17.4■□□□□ 0.38
MARK3-213ENST00000558611 PDE4AP27815 886 aa17.39■□□□□ 0.37
MARK3-213ENST00000558611 ARIH1Q9Y4X5 557 aaPredicted RBP17.39■□□□□ 0.37
MARK3-213ENST00000558611 NCKAP5LQ9HCH0 1330 aa17.39■□□□□ 0.37
MARK3-213ENST00000558611 MFSD10Q14728 455 aa17.38■□□□□ 0.37
MARK3-213ENST00000558611 KIF12Q96FN5 646 aa17.38■□□□□ 0.37
MARK3-213ENST00000558611 MAP3K13O43283 966 aa17.37■□□□□ 0.37
MARK3-213ENST00000558611 ZMYND10O75800 440 aa17.36■□□□□ 0.37
MARK3-213ENST00000558611 LARP6Q9BRS8 491 aaKnown RBP17.35■□□□□ 0.37
MARK3-213ENST00000558611 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
MARK3-213ENST00000558611 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
MARK3-213ENST00000558611 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.36
MARK3-213ENST00000558611 CRISPLD2Q9H0B8 497 aa17.3■□□□□ 0.36
MARK3-213ENST00000558611 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
MARK3-213ENST00000558611 WDR62O43379 1518 aa17.28■□□□□ 0.36
MARK3-213ENST00000558611 HOMEZQ8IX15 550 aa17.28■□□□□ 0.36
MARK3-213ENST00000558611 DDX27Q96GQ7 796 aaKnown RBP17.27■□□□□ 0.36
MARK3-213ENST00000558611 MS4A4AQ96JQ5 239 aa17.26■□□□□ 0.35
MARK3-213ENST00000558611 CAMK2BQ13554 666 aa17.25■□□□□ 0.35
MARK3-213ENST00000558611 BARGINQ6ZT62 677 aa17.25■□□□□ 0.35
MARK3-213ENST00000558611 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
MARK3-213ENST00000558611 DAXXQ9UER7 740 aaPredicted RBP17.19■□□□□ 0.34
MARK3-213ENST00000558611 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
MARK3-213ENST00000558611 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
MARK3-213ENST00000558611 AK7Q96M32 723 aa17.13■□□□□ 0.33
MARK3-213ENST00000558611 GPIHBP1Q8IV16 184 aa17.09■□□□□ 0.33
MARK3-213ENST00000558611 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
MARK3-213ENST00000558611 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
MARK3-213ENST00000558611 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
MARK3-213ENST00000558611 TMEM106CQ9BVX2 250 aa17.05■□□□□ 0.32
MARK3-213ENST00000558611 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
MARK3-213ENST00000558611 MKRN3Q13064 507 aaKnown RBP17.04■□□□□ 0.32
MARK3-213ENST00000558611 RBM26Q5T8P6 1007 aaKnown RBP17.04■□□□□ 0.32
MARK3-213ENST00000558611 MLLT3P42568 568 aaPredicted RBP17.03■□□□□ 0.32
MARK3-213ENST00000558611 PPP1R15BQ5SWA1 713 aa17.01■□□□□ 0.31
MARK3-213ENST00000558611 PIP4P2Q8N4L2 257 aa17.01■□□□□ 0.31
MARK3-213ENST00000558611 KRI1Q8N9T8 703 aaKnown RBP17.01■□□□□ 0.31
MARK3-213ENST00000558611 PHF12Q96QT6 1004 aa17■□□□□ 0.31
MARK3-213ENST00000558611 GPHNQ9NQX3 736 aaPredicted RBP17■□□□□ 0.31
MARK3-213ENST00000558611 CD44P16070 742 aaKnown RBP16.99■□□□□ 0.31
MARK3-213ENST00000558611 GPBP1L1Q9HC44 474 aaPredicted RBP16.97■□□□□ 0.31
MARK3-213ENST00000558611 SPDYE16A6NNV3 312 aaPredicted RBP16.96■□□□□ 0.31
MARK3-213ENST00000558611 ILDR1Q86SU0 546 aaPredicted RBP16.95■□□□□ 0.3
MARK3-213ENST00000558611 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
MARK3-213ENST00000558611 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
MARK3-213ENST00000558611 POTEHQ6S545 545 aa16.93■□□□□ 0.3
MARK3-213ENST00000558611 CHRDL2Q6WN34 429 aa16.93■□□□□ 0.3
MARK3-213ENST00000558611 KDM4CQ9H3R0 1056 aa16.93■□□□□ 0.3
MARK3-213ENST00000558611 CUX1P39880 1505 aa16.92■□□□□ 0.3
MARK3-213ENST00000558611 TRIM66O15016 1216 aa16.91■□□□□ 0.3
MARK3-213ENST00000558611 PDIA6Q15084 440 aa16.91■□□□□ 0.3
MARK3-213ENST00000558611 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
MARK3-213ENST00000558611 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.3
MARK3-213ENST00000558611 PDE4DQ08499 809 aa16.89■□□□□ 0.29
MARK3-213ENST00000558611 DPYSL4O14531 572 aa16.88■□□□□ 0.29
MARK3-213ENST00000558611 IL27Q8NEV9 243 aa16.88■□□□□ 0.29
MARK3-213ENST00000558611 MS4A3Q96HJ5 214 aa16.87■□□□□ 0.29
MARK3-213ENST00000558611 EMILIN3Q9NT22 766 aa16.87■□□□□ 0.29
MARK3-213ENST00000558611 TRPC6Q9Y210 931 aa16.87■□□□□ 0.29
MARK3-213ENST00000558611 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
MARK3-213ENST00000558611 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
MARK3-213ENST00000558611 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
MARK3-213ENST00000558611 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
MARK3-213ENST00000558611 TIE1P35590 1138 aa16.85■□□□□ 0.29
MARK3-213ENST00000558611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.291e-10■■□□□ 14.2
MARK3-213ENST00000558611 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
MARK3-213ENST00000558611 DSG2Q14126 1118 aa16.81■□□□□ 0.28
MARK3-213ENST00000558611 ZMYND15Q9H091 742 aa16.8■□□□□ 0.28
MARK3-213ENST00000558611 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
MARK3-213ENST00000558611 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
MARK3-213ENST00000558611 GPR37O15354 613 aa16.79■□□□□ 0.28
MARK3-213ENST00000558611 FOXK1P85037 733 aa16.79■□□□□ 0.28
MARK3-213ENST00000558611 SOGA1O94964 1423 aa16.79■□□□□ 0.28
MARK3-213ENST00000558611 TTLL13PA6NNM8 815 aa16.78■□□□□ 0.28
MARK3-213ENST00000558611 PBRM1Q86U86 1689 aa16.76■□□□□ 0.27
MARK3-213ENST00000558611 TMC2Q8TDI7 906 aa16.76■□□□□ 0.27
MARK3-213ENST00000558611 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
MARK3-213ENST00000558611 CHD1O14646 1710 aa16.75■□□□□ 0.27
MARK3-213ENST00000558611 MINK1Q8N4C8 1332 aaPredicted RBP16.74■□□□□ 0.27
MARK3-213ENST00000558611 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.273e-11■■■□□ 17.4
MARK3-213ENST00000558611 RSPH6AQ9H0K4 717 aa16.73■□□□□ 0.27
MARK3-213ENST00000558611 MICALL2Q8IY33 904 aa16.72■□□□□ 0.27
MARK3-213ENST00000558611 ABCA5Q8WWZ7 1642 aa16.71■□□□□ 0.27
MARK3-213ENST00000558611 ABCA10Q8WWZ4 1543 aa16.7■□□□□ 0.26
MARK3-213ENST00000558611 MAP2K5Q13163 448 aa16.68■□□□□ 0.26
MARK3-213ENST00000558611 BMP2KQ9NSY1 1161 aaPredicted RBP16.68■□□□□ 0.26
MARK3-213ENST00000558611 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
MARK3-213ENST00000558611 DDRGK1Q96HY6 314 aa16.67■□□□□ 0.26
MARK3-213ENST00000558611 FAM117AQ9C073 453 aa16.67■□□□□ 0.26
MARK3-213ENST00000558611 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
MARK3-213ENST00000558611 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
MARK3-213ENST00000558611 C19orf67A6NJJ6 358 aa16.65■□□□□ 0.26
MARK3-213ENST00000558611 PLPP6Q8IY26 295 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms