RNA–Protein interactions for RNA: ENST00000558431.1

SEMA6D-209, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-209ENST00000558431 SPDYE1Q8NFV5 336 aaPredicted RBP16.15■□□□□ 0.18
SEMA6D-209ENST00000558431 MAP3K4Q9Y6R4 1608 aa16.15■□□□□ 0.18
SEMA6D-209ENST00000558431 WDR7Q9Y4E6 1490 aa16.15■□□□□ 0.18
SEMA6D-209ENST00000558431 ARID3CA6NKF2 412 aa16.13■□□□□ 0.17
SEMA6D-209ENST00000558431 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
SEMA6D-209ENST00000558431 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
SEMA6D-209ENST00000558431 KIF21BO75037 1637 aa16.11■□□□□ 0.17
SEMA6D-209ENST00000558431 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
SEMA6D-209ENST00000558431 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.17
SEMA6D-209ENST00000558431 POTEHQ6S545 545 aa16.08■□□□□ 0.16
SEMA6D-209ENST00000558431 RAPGEF6Q8TEU7 1601 aa16.08■□□□□ 0.16
SEMA6D-209ENST00000558431 FHOD3Q2V2M9 1422 aa16.05■□□□□ 0.16
SEMA6D-209ENST00000558431 ATP10BO94823 1461 aa16.04■□□□□ 0.16
SEMA6D-209ENST00000558431 CD109Q6YHK3 1445 aa16.04■□□□□ 0.16
SEMA6D-209ENST00000558431 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
SEMA6D-209ENST00000558431 COL17A1Q9UMD9 1497 aaPredicted RBP16.02■□□□□ 0.15
SEMA6D-209ENST00000558431 EFCAB5A4FU69 1503 aa16■□□□□ 0.15
SEMA6D-209ENST00000558431 FKBP8Q14318 412 aa16■□□□□ 0.15
SEMA6D-209ENST00000558431 MAGI3Q5TCQ9 1506 aa15.99■□□□□ 0.15
SEMA6D-209ENST00000558431 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
SEMA6D-209ENST00000558431 ABCA9Q8IUA7 1624 aa15.96■□□□□ 0.15
SEMA6D-209ENST00000558431 KDM4FA0A1W2PPD8 638 aa15.95■□□□□ 0.14
SEMA6D-209ENST00000558431 PRR29P0C7W0 189 aa15.95■□□□□ 0.14
SEMA6D-209ENST00000558431 PIP4P2Q8N4L2 257 aa15.94■□□□□ 0.14
SEMA6D-209ENST00000558431 PLEKHD1A6NEE1 506 aa15.92■□□□□ 0.14
SEMA6D-209ENST00000558431 ATP1B4Q9UN42 357 aaPredicted RBP15.91■□□□□ 0.14
SEMA6D-209ENST00000558431 STAG3Q9UJ98 1225 aa15.9■□□□□ 0.14
SEMA6D-209ENST00000558431 ADGRL1O94910 1474 aa15.9■□□□□ 0.14
SEMA6D-209ENST00000558431 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
SEMA6D-209ENST00000558431 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
SEMA6D-209ENST00000558431 CDK13Q14004 1512 aaKnown RBP15.87■□□□□ 0.13
SEMA6D-209ENST00000558431 ARAP3Q8WWN8 1544 aa15.87■□□□□ 0.13
SEMA6D-209ENST00000558431 FMN1Q68DA7 1419 aa15.86■□□□□ 0.13
SEMA6D-209ENST00000558431 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
SEMA6D-209ENST00000558431 PHLDB1Q86UU1 1377 aa15.85■□□□□ 0.13
SEMA6D-209ENST00000558431 NEO1Q92859 1461 aa15.84■□□□□ 0.13
SEMA6D-209ENST00000558431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.82■□□□□ 0.12
SEMA6D-209ENST00000558431 TTC37Q6PGP7 1564 aa15.82■□□□□ 0.12
SEMA6D-209ENST00000558431 RAPGEF3O95398 923 aa15.81■□□□□ 0.12
SEMA6D-209ENST00000558431 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
SEMA6D-209ENST00000558431 CFAP74Q9C0B2 1584 aa15.8■□□□□ 0.12
SEMA6D-209ENST00000558431 LRRIQ1Q96JM4 1722 aa15.78■□□□□ 0.12
SEMA6D-209ENST00000558431 PROM2Q8N271 834 aa15.78■□□□□ 0.12
SEMA6D-209ENST00000558431 CDK11AQ9UQ88 783 aaPredicted RBP15.78■□□□□ 0.12
SEMA6D-209ENST00000558431 FANCAO15360 1455 aa15.78■□□□□ 0.12
SEMA6D-209ENST00000558431 FRMPD1Q5SYB0 1578 aa15.76■□□□□ 0.11
SEMA6D-209ENST00000558431 MYO5CQ9NQX4 1742 aa15.76■□□□□ 0.11
SEMA6D-209ENST00000558431 AKNAQ7Z591 1439 aa15.76■□□□□ 0.11
SEMA6D-209ENST00000558431 RICTORQ6R327 1708 aa15.75■□□□□ 0.11
SEMA6D-209ENST00000558431 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
SEMA6D-209ENST00000558431 DENND4BO75064 1496 aaPredicted RBP15.75■□□□□ 0.11
SEMA6D-209ENST00000558431 KIF14Q15058 1648 aa15.73■□□□□ 0.11
SEMA6D-209ENST00000558431 PCF11O94913 1555 aaKnown RBP15.73■□□□□ 0.11
SEMA6D-209ENST00000558431 ARID4BQ4LE39 1312 aaPredicted RBP15.71■□□□□ 0.11
SEMA6D-209ENST00000558431 CLIP1P30622 1438 aa15.71■□□□□ 0.11
SEMA6D-209ENST00000558431 PLCH2O75038 1416 aa15.7■□□□□ 0.1
SEMA6D-209ENST00000558431 TROQ12816 1431 aaPredicted RBP15.7■□□□□ 0.1
SEMA6D-209ENST00000558431 ARHGEF40Q8TER5 1519 aa15.69■□□□□ 0.1
SEMA6D-209ENST00000558431 CASKIN1Q8WXD9 1431 aa15.68■□□□□ 0.1
SEMA6D-209ENST00000558431 CCDC18Q5T9S5 1454 aa15.68■□□□□ 0.1
SEMA6D-209ENST00000558431 EFCAB2Q5VUJ9 269 aa15.68■□□□□ 0.1
SEMA6D-209ENST00000558431 BCORL1Q5H9F3 1711 aa15.67■□□□□ 0.1
SEMA6D-209ENST00000558431 SCAPERQ9BY12 1400 aa15.67■□□□□ 0.1
SEMA6D-209ENST00000558431 ADAMTSL3P82987 1691 aa15.67■□□□□ 0.1
SEMA6D-209ENST00000558431 ARHGAP5Q13017 1502 aa15.66■□□□□ 0.1
SEMA6D-209ENST00000558431 ZMYM4Q5VZL5 1548 aa15.65■□□□□ 0.1
SEMA6D-209ENST00000558431 ZFYVE16Q7Z3T8 1539 aa15.65■□□□□ 0.1
SEMA6D-209ENST00000558431 HECW2Q9P2P5 1572 aa15.65■□□□□ 0.1
SEMA6D-209ENST00000558431 CDC42BPBQ9Y5S2 1711 aa15.65■□□□□ 0.1
SEMA6D-209ENST00000558431 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
SEMA6D-209ENST00000558431 POGZQ7Z3K3 1410 aa15.63■□□□□ 0.09
SEMA6D-209ENST00000558431 MADDQ8WXG6 1647 aa15.63■□□□□ 0.09
SEMA6D-209ENST00000558431 YEATS2Q9ULM3 1422 aa15.61■□□□□ 0.09
SEMA6D-209ENST00000558431 MAGI2Q86UL8 1455 aa15.61■□□□□ 0.09
SEMA6D-209ENST00000558431 HAX1O00165 279 aa15.61■□□□□ 0.09
SEMA6D-209ENST00000558431 PREX2Q70Z35 1606 aa15.61■□□□□ 0.09
SEMA6D-209ENST00000558431 RIMS1Q86UR5 1692 aaKnown RBP15.6■□□□□ 0.09
SEMA6D-209ENST00000558431 CDC42BPAQ5VT25 1732 aa15.6■□□□□ 0.09
SEMA6D-209ENST00000558431 PTPRMP28827 1452 aa15.6■□□□□ 0.09
SEMA6D-209ENST00000558431 MYT1LQ9UL68 1186 aa15.6■□□□□ 0.09
SEMA6D-209ENST00000558431 SIGLEC1Q9BZZ2 1709 aa15.59■□□□□ 0.09
SEMA6D-209ENST00000558431 MLECQ14165 292 aa15.57■□□□□ 0.08
SEMA6D-209ENST00000558431 CREBZFQ9NS37 354 aa15.57■□□□□ 0.08
SEMA6D-209ENST00000558431 ZNF518AQ6AHZ1 1483 aa15.57■□□□□ 0.08
SEMA6D-209ENST00000558431 AFAP1Q8N556 730 aa15.56■□□□□ 0.08
SEMA6D-209ENST00000558431 FER1L4A9Z1Z3 1794 aa15.56■□□□□ 0.08
SEMA6D-209ENST00000558431 ITSN2Q9NZM3 1697 aa15.55■□□□□ 0.08
SEMA6D-209ENST00000558431 CEP162Q5TB80 1403 aa15.55■□□□□ 0.08
SEMA6D-209ENST00000558431 ATP10AO60312 1499 aa15.54■□□□□ 0.08
SEMA6D-209ENST00000558431 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
SEMA6D-209ENST00000558431 ZNF777Q9ULD5 760 aaPredicted RBP15.53■□□□□ 0.08
SEMA6D-209ENST00000558431 FARP1Q9Y4F1 1045 aaPredicted RBP15.53■□□□□ 0.08
SEMA6D-209ENST00000558431 KDM5CP41229 1560 aa15.53■□□□□ 0.08
SEMA6D-209ENST00000558431 ABCC1P33527 1531 aa15.53■□□□□ 0.08
SEMA6D-209ENST00000558431 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.08
SEMA6D-209ENST00000558431 MIER1Q8N108 512 aa15.52■□□□□ 0.08
SEMA6D-209ENST00000558431 PLEKHG5O94827 1062 aa15.5■□□□□ 0.07
SEMA6D-209ENST00000558431 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
SEMA6D-209ENST00000558431 TRAPPC8Q9Y2L5 1435 aa15.5■□□□□ 0.07
SEMA6D-209ENST00000558431 ARHGEF12Q9NZN5 1544 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms