RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 KIF14Q15058 1648 aa36.37■■■■□ 3.41
SPG21-205ENST00000558339 CDK11AQ9UQ88 783 aaPredicted RBP36.36■■■■□ 3.41
SPG21-205ENST00000558339 RIMS1Q86UR5 1692 aaKnown RBP36.35■■■■□ 3.41
SPG21-205ENST00000558339 TROQ12816 1431 aaPredicted RBP36.34■■■■□ 3.41
SPG21-205ENST00000558339 EFCAB2Q5VUJ9 269 aa36.32■■■■□ 3.4
SPG21-205ENST00000558339 MYO5CQ9NQX4 1742 aa36.31■■■■□ 3.4
SPG21-205ENST00000558339 LRRIQ1Q96JM4 1722 aa36.31■■■■□ 3.4
SPG21-205ENST00000558339 PCF11O94913 1555 aaKnown RBP36.3■■■■□ 3.4
SPG21-205ENST00000558339 LMTK3Q96Q04 1460 aa36.3■■■■□ 3.4
SPG21-205ENST00000558339 CLIP1P30622 1438 aa36.23■■■■□ 3.39
SPG21-205ENST00000558339 ATP10AO60312 1499 aa36.21■■■■□ 3.39
SPG21-205ENST00000558339 MLECQ14165 292 aa36.21■■■■□ 3.39
SPG21-205ENST00000558339 ARHGAP5Q13017 1502 aa36.2■■■■□ 3.39
SPG21-205ENST00000558339 CASKIN1Q8WXD9 1431 aa36.19■■■■□ 3.38
SPG21-205ENST00000558339 C9orf84Q5VXU9 1444 aa36.17■■■■□ 3.38
SPG21-205ENST00000558339 PLPPR3Q6T4P5 718 aa36.16■■■■□ 3.38
SPG21-205ENST00000558339 ZNF518AQ6AHZ1 1483 aa36.16■■■■□ 3.38
SPG21-205ENST00000558339 AFAP1Q8N556 730 aa36.14■■■■□ 3.38
SPG21-205ENST00000558339 KDM5CP41229 1560 aa36.14■■■■□ 3.38
SPG21-205ENST00000558339 ARHGEF12Q9NZN5 1544 aa36.13■■■■□ 3.37
SPG21-205ENST00000558339 CCDC18Q5T9S5 1454 aa36.11■■■■□ 3.37
SPG21-205ENST00000558339 FER1L4A9Z1Z3 1794 aa36.1■■■■□ 3.37
SPG21-205ENST00000558339 CDC42BPBQ9Y5S2 1711 aa36.1■■■■□ 3.37
SPG21-205ENST00000558339 HSPA2P54652 639 aa36.09■■■■□ 3.37
SPG21-205ENST00000558339 PREX2Q70Z35 1606 aa36.05■■■■□ 3.36
SPG21-205ENST00000558339 DIP2CQ9Y2E4 1556 aa36.02■■■■□ 3.36
SPG21-205ENST00000558339 FYCO1Q9BQS8 1478 aa36.02■■■■□ 3.36
SPG21-205ENST00000558339 TRAPPC8Q9Y2L5 1435 aa36.01■■■■□ 3.36
SPG21-205ENST00000558339 FBXO41Q8TF61 875 aa36.01■■■■□ 3.36
SPG21-205ENST00000558339 ABCC1P33527 1531 aa36.01■■■■□ 3.36
SPG21-205ENST00000558339 MLH3Q9UHC1 1453 aa35.99■■■■□ 3.35
SPG21-205ENST00000558339 ABCA6Q8N139 1617 aa35.96■■■■□ 3.35
SPG21-205ENST00000558339 REREQ9P2R6 1566 aa35.95■■■■□ 3.35
SPG21-205ENST00000558339 CEBPAP49715 358 aaPredicted RBP35.95■■■■□ 3.35
SPG21-205ENST00000558339 MYT1LQ9UL68 1186 aa35.95■■■■□ 3.35
SPG21-205ENST00000558339 ITSN2Q9NZM3 1697 aa35.93■■■■□ 3.34
SPG21-205ENST00000558339 CDC42BPAQ5VT25 1732 aa35.92■■■■□ 3.34
SPG21-205ENST00000558339 AGLP35573 1532 aa35.85■■■■□ 3.33
SPG21-205ENST00000558339 GPATCH8Q9UKJ3 1502 aaKnown RBP35.84■■■■□ 3.33
SPG21-205ENST00000558339 PREX1Q8TCU6 1659 aa35.83■■■■□ 3.33
SPG21-205ENST00000558339 KIDINS220Q9ULH0 1771 aa35.83■■■■□ 3.33
SPG21-205ENST00000558339 SAMD9LQ8IVG5 1584 aa35.82■■■■□ 3.32
SPG21-205ENST00000558339 ZNF777Q9ULD5 760 aaPredicted RBP35.79■■■■□ 3.32
SPG21-205ENST00000558339 SYCP2Q9BX26 1530 aa35.76■■■■□ 3.31
SPG21-205ENST00000558339 HNRNPMP52272 730 aaKnown RBP eCLIP35.72■■■■□ 3.31
SPG21-205ENST00000558339 UHRF1BP1Q6BDS2 1440 aa35.72■■■■□ 3.31
SPG21-205ENST00000558339 C3P01024 1663 aa35.71■■■■□ 3.31
SPG21-205ENST00000558339 KIAA1107Q9UPP5 1409 aa35.67■■■■□ 3.3
SPG21-205ENST00000558339 SPAG9O60271 1321 aaKnown RBP35.67■■■■□ 3.3
SPG21-205ENST00000558339 CFDP1Q9UEE9 299 aaPredicted RBP35.67■■■■□ 3.3
SPG21-205ENST00000558339 CCNB3Q8WWL7 1395 aa35.66■■■■□ 3.3
SPG21-205ENST00000558339 MTUS2Q5JR59 1369 aa35.65■■■■□ 3.3
SPG21-205ENST00000558339 CERKQ8TCT0 537 aa35.65■■■■□ 3.3
SPG21-205ENST00000558339 SETD1BQ9UPS6 1966 aaKnown RBP35.65■■■■□ 3.3
SPG21-205ENST00000558339 STRCQ7RTU9 1775 aa35.64■■■■□ 3.3
SPG21-205ENST00000558339 ESF1Q9H501 851 aaKnown RBP35.64■■■■□ 3.3
SPG21-205ENST00000558339 PLEKHH2Q8IVE3 1493 aa35.62■■■■□ 3.29
SPG21-205ENST00000558339 CNTLNQ9NXG0 1405 aa35.61■■■■□ 3.29
SPG21-205ENST00000558339 ATP7AQ04656 1500 aa35.61■■■■□ 3.29
SPG21-205ENST00000558339 INO80Q9ULG1 1556 aaPredicted RBP35.59■■■■□ 3.29
SPG21-205ENST00000558339 TIAM1Q13009 1591 aa35.56■■■■□ 3.28
SPG21-205ENST00000558339 CEP162Q5TB80 1403 aa35.56■■■■□ 3.28
SPG21-205ENST00000558339 PLXNC1O60486 1568 aa35.55■■■■□ 3.28
SPG21-205ENST00000558339 ZNF644Q9H582 1327 aaPredicted RBP35.55■■■■□ 3.28
SPG21-205ENST00000558339 EHBP1L1Q8N3D4 1523 aa35.54■■■■□ 3.28
SPG21-205ENST00000558339 SUPT6HQ7KZ85 1726 aaKnown RBP35.53■■■■□ 3.28
SPG21-205ENST00000558339 DMRT2Q9Y5R5 561 aa35.53■■■■□ 3.28
SPG21-205ENST00000558339 A2MP01023 1474 aa35.52■■■■□ 3.28
SPG21-205ENST00000558339 MROH2AA6NES4 1674 aa35.49■■■■□ 3.27
SPG21-205ENST00000558339 ZMYM3Q14202 1370 aa35.49■■■■□ 3.27
SPG21-205ENST00000558339 MBD5Q9P267 1494 aa35.48■■■■□ 3.27
SPG21-205ENST00000558339 NPATQ14207 1427 aa35.47■■■■□ 3.27
SPG21-205ENST00000558339 PTPRTO14522 1441 aa35.46■■■■□ 3.27
SPG21-205ENST00000558339 NCOA1Q15788 1441 aa35.41■■■■□ 3.26
SPG21-205ENST00000558339 CLTCQ00610 1675 aaKnown RBP35.4■■■■□ 3.26
SPG21-205ENST00000558339 GGT6Q6P531 493 aa35.39■■■■□ 3.26
SPG21-205ENST00000558339 ADGBQ8N7X0 1667 aa35.37■■■■□ 3.25
SPG21-205ENST00000558339 RTEL1-TNFRSF6BF6WH68 1400 aa35.36■■■■□ 3.25
SPG21-205ENST00000558339 NCOA2Q15596 1464 aa35.35■■■■□ 3.25
SPG21-205ENST00000558339 PTPRKQ15262 1439 aa35.34■■■■□ 3.25
SPG21-205ENST00000558339 CAMSAP1Q5T5Y3 1602 aa35.32■■■■□ 3.25
SPG21-205ENST00000558339 DHX29Q7Z478 1369 aaKnown RBP35.29■■■■□ 3.24
SPG21-205ENST00000558339 LTBP4Q8N2S1 1624 aa35.29■■■■□ 3.24
SPG21-205ENST00000558339 PPP6R1Q9UPN7 881 aa35.29■■■■□ 3.24
SPG21-205ENST00000558339 CAMSAP2Q08AD1 1489 aa35.28■■■■□ 3.24
SPG21-205ENST00000558339 MYO3AQ8NEV4 1616 aa35.27■■■■□ 3.24
SPG21-205ENST00000558339 CCDC141Q6ZP82 1450 aa35.27■■■■□ 3.24
SPG21-205ENST00000558339 ZNF142P52746 1687 aaPredicted RBP35.24■■■■□ 3.23
SPG21-205ENST00000558339 NCKAP5LQ9HCH0 1330 aa35.23■■■■□ 3.23
SPG21-205ENST00000558339 CEP170BQ9Y4F5 1589 aaPredicted RBP35.21■■■■□ 3.23
SPG21-205ENST00000558339 LOC105371045A0A1W2PR82 267 aa35.21■■■■□ 3.23
SPG21-205ENST00000558339 VPS8Q8N3P4 1428 aa35.19■■■■□ 3.22
SPG21-205ENST00000558339 PLA2R1Q13018 1463 aa35.18■■■■□ 3.22
SPG21-205ENST00000558339 RSPH4AQ5TD94 716 aa35.17■■■■□ 3.22
SPG21-205ENST00000558339 KIF3BO15066 747 aa35.16■■■■□ 3.22
SPG21-205ENST00000558339 LRRC9Q6ZRR7 1453 aa35.16■■■■□ 3.22
SPG21-205ENST00000558339 TCOF1Q13428 1488 aaKnown RBP35.15■■■■□ 3.22
SPG21-205ENST00000558339 ARHGEF5Q12774 1597 aa35.14■■■■□ 3.22
SPG21-205ENST00000558339 PKD2Q13563 968 aa35.11■■■■□ 3.21
SPG21-205ENST00000558339 IQSEC2Q5JU85 1478 aa35.1■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms