RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 CD109Q6YHK3 1445 aa18.07■□□□□ 0.48
RORA-207ENST00000558234 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
RORA-207ENST00000558234 MAST1Q9Y2H9 1570 aa18.06■□□□□ 0.48
RORA-207ENST00000558234 NPM1P06748 294 aaKnown RBP eCLIP18.06■□□□□ 0.48
RORA-207ENST00000558234 MTUS2Q5JR59 1369 aa18.06■□□□□ 0.48
RORA-207ENST00000558234 INO80Q9ULG1 1556 aaPredicted RBP18.05■□□□□ 0.48
RORA-207ENST00000558234 TEX14Q8IWB6 1497 aa18.05■□□□□ 0.48
RORA-207ENST00000558234 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
RORA-207ENST00000558234 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
RORA-207ENST00000558234 MBD5Q9P267 1494 aa18.04■□□□□ 0.48
RORA-207ENST00000558234 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
RORA-207ENST00000558234 CDK11AQ9UQ88 783 aaPredicted RBP18.03■□□□□ 0.48
RORA-207ENST00000558234 FANCAO15360 1455 aa18.03■□□□□ 0.48
RORA-207ENST00000558234 CAMSAP2Q08AD1 1489 aa18.02■□□□□ 0.48
RORA-207ENST00000558234 KIAA1107Q9UPP5 1409 aa18.01■□□□□ 0.47
RORA-207ENST00000558234 COL17A1Q9UMD9 1497 aaPredicted RBP18.01■□□□□ 0.47
RORA-207ENST00000558234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.01■□□□□ 0.47
RORA-207ENST00000558234 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
RORA-207ENST00000558234 ARHGAP5Q13017 1502 aa18■□□□□ 0.47
RORA-207ENST00000558234 BCORL1Q5H9F3 1711 aa18■□□□□ 0.47
RORA-207ENST00000558234 ADGBQ8N7X0 1667 aa18■□□□□ 0.47
RORA-207ENST00000558234 SIGLEC1Q9BZZ2 1709 aa17.99■□□□□ 0.47
RORA-207ENST00000558234 KIDINS220Q9ULH0 1771 aa17.99■□□□□ 0.47
RORA-207ENST00000558234 SYCP2Q9BX26 1530 aa17.99■□□□□ 0.47
RORA-207ENST00000558234 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
RORA-207ENST00000558234 AKNAQ7Z591 1439 aa17.96■□□□□ 0.47
RORA-207ENST00000558234 POGZQ7Z3K3 1410 aa17.96■□□□□ 0.47
RORA-207ENST00000558234 REREQ9P2R6 1566 aa17.96■□□□□ 0.47
RORA-207ENST00000558234 FAM69CQ0P6D2 419 aa17.96■□□□□ 0.47
RORA-207ENST00000558234 ZFYVE16Q7Z3T8 1539 aa17.95■□□□□ 0.46
RORA-207ENST00000558234 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
RORA-207ENST00000558234 PLEKHH2Q8IVE3 1493 aa17.95■□□□□ 0.46
RORA-207ENST00000558234 KDM6BO15054 1643 aa17.94■□□□□ 0.46
RORA-207ENST00000558234 TRIM26Q12899 539 aaPredicted RBP17.94■□□□□ 0.46
RORA-207ENST00000558234 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
RORA-207ENST00000558234 HECW2Q9P2P5 1572 aa17.93■□□□□ 0.46
RORA-207ENST00000558234 ABCA6Q8N139 1617 aa17.93■□□□□ 0.46
RORA-207ENST00000558234 ADGRL1O94910 1474 aa17.92■□□□□ 0.46
RORA-207ENST00000558234 ARHGEF40Q8TER5 1519 aa17.92■□□□□ 0.46
RORA-207ENST00000558234 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
RORA-207ENST00000558234 ADGRL2O95490 1459 aa17.9■□□□□ 0.46
RORA-207ENST00000558234 DIP2CQ9Y2E4 1556 aa17.89■□□□□ 0.46
RORA-207ENST00000558234 MLH3Q9UHC1 1453 aa17.89■□□□□ 0.45
RORA-207ENST00000558234 KCNH8Q96L42 1107 aa17.89■□□□□ 0.45
RORA-207ENST00000558234 GCC2Q8IWJ2 1684 aa17.88■□□□□ 0.45
RORA-207ENST00000558234 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
RORA-207ENST00000558234 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
RORA-207ENST00000558234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
RORA-207ENST00000558234 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
RORA-207ENST00000558234 CCDC141Q6ZP82 1450 aa17.86■□□□□ 0.45
RORA-207ENST00000558234 MAGI2Q86UL8 1455 aa17.86■□□□□ 0.45
RORA-207ENST00000558234 ABCC5O15440 1437 aa17.85■□□□□ 0.45
RORA-207ENST00000558234 PTPRKQ15262 1439 aa17.85■□□□□ 0.45
RORA-207ENST00000558234 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
RORA-207ENST00000558234 DAPK1P53355 1430 aa17.85■□□□□ 0.45
RORA-207ENST00000558234 DENND4BO75064 1496 aaPredicted RBP17.84■□□□□ 0.45
RORA-207ENST00000558234 RTEL1-TNFRSF6BF6WH68 1400 aa17.84■□□□□ 0.45
RORA-207ENST00000558234 DEPDC5O75140 1603 aa17.84■□□□□ 0.45
RORA-207ENST00000558234 EIF2AK4Q9P2K8 1649 aaKnown RBP17.84■□□□□ 0.45
RORA-207ENST00000558234 SCAPERQ9BY12 1400 aa17.82■□□□□ 0.44
RORA-207ENST00000558234 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
RORA-207ENST00000558234 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
RORA-207ENST00000558234 EFCAB2Q5VUJ9 269 aa17.8■□□□□ 0.44
RORA-207ENST00000558234 MROH1Q8NDA8 1641 aa17.79■□□□□ 0.44
RORA-207ENST00000558234 APLP2Q06481 763 aa17.78■□□□□ 0.44
RORA-207ENST00000558234 AGLP35573 1532 aa17.76■□□□□ 0.43
RORA-207ENST00000558234 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
RORA-207ENST00000558234 CFDP1Q9UEE9 299 aaPredicted RBP17.76■□□□□ 0.43
RORA-207ENST00000558234 ROCK1Q13464 1354 aa17.74■□□□□ 0.43
RORA-207ENST00000558234 UNC13BO14795 1591 aa17.74■□□□□ 0.43
RORA-207ENST00000558234 VWDEQ8N2E2 1590 aa17.73■□□□□ 0.43
RORA-207ENST00000558234 C9orf84Q5VXU9 1444 aa17.72■□□□□ 0.43
RORA-207ENST00000558234 PPARGC1BQ86YN6 1023 aaKnown RBP17.72■□□□□ 0.43
RORA-207ENST00000558234 YEATS2Q9ULM3 1422 aa17.72■□□□□ 0.43
RORA-207ENST00000558234 NCOA1Q15788 1441 aa17.7■□□□□ 0.42
RORA-207ENST00000558234 DUOX2Q9NRD8 1548 aa17.7■□□□□ 0.42
RORA-207ENST00000558234 TRHP20396 242 aaPredicted RBP17.7■□□□□ 0.42
RORA-207ENST00000558234 RSPH4AQ5TD94 716 aa17.69■□□□□ 0.42
RORA-207ENST00000558234 ADAMTSL3P82987 1691 aa17.69■□□□□ 0.42
RORA-207ENST00000558234 PRDM15P57071 1507 aaPredicted RBP17.68■□□□□ 0.42
RORA-207ENST00000558234 FAM135AQ9P2D6 1515 aa17.68■□□□□ 0.42
RORA-207ENST00000558234 KDM5DQ9BY66 1539 aa17.66■□□□□ 0.42
RORA-207ENST00000558234 ZC3H13Q5T200 1668 aaKnown RBP17.66■□□□□ 0.42
RORA-207ENST00000558234 ATP10AO60312 1499 aa17.66■□□□□ 0.42
RORA-207ENST00000558234 HNRNPMP52272 730 aaKnown RBP eCLIP17.66■□□□□ 0.42
RORA-207ENST00000558234 ERBINQ96RT1 1412 aa17.66■□□□□ 0.42
RORA-207ENST00000558234 MROH2AA6NES4 1674 aa17.65■□□□□ 0.42
RORA-207ENST00000558234 HFM1A2PYH4 1435 aa17.65■□□□□ 0.42
RORA-207ENST00000558234 RAPGEF3O95398 923 aa17.64■□□□□ 0.41
RORA-207ENST00000558234 IQGAP3Q86VI3 1631 aa17.63■□□□□ 0.41
RORA-207ENST00000558234 AFAP1Q8N556 730 aa17.63■□□□□ 0.41
RORA-207ENST00000558234 NAIPQ13075 1403 aa17.63■□□□□ 0.41
RORA-207ENST00000558234 A2MP01023 1474 aa17.62■□□□□ 0.41
RORA-207ENST00000558234 LMTK2Q8IWU2 1503 aa17.6■□□□□ 0.41
RORA-207ENST00000558234 DHX29Q7Z478 1369 aaKnown RBP17.58■□□□□ 0.4
RORA-207ENST00000558234 FER1L4A9Z1Z3 1794 aa17.57■□□□□ 0.4
RORA-207ENST00000558234 CEP152O94986 1710 aa17.57■□□□□ 0.4
RORA-207ENST00000558234 ZNF777Q9ULD5 760 aaPredicted RBP17.55■□□□□ 0.4
RORA-207ENST00000558234 SPAG9O60271 1321 aaKnown RBP17.55■□□□□ 0.4
RORA-207ENST00000558234 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms