RNA–Protein interactions for RNA: ENST00000557856.5

NTRK3-208, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NTRK3, Length 2,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-208ENST00000557856 UBE2Q2Q8WVN8 375 aa13.73□□□□□ -0.21
NTRK3-208ENST00000557856 CHD1O14646 1710 aa13.72□□□□□ -0.21
NTRK3-208ENST00000557856 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
NTRK3-208ENST00000557856 NUP153P49790 1475 aaKnown RBP13.72□□□□□ -0.21
NTRK3-208ENST00000557856 IRX6P78412 446 aaPredicted RBP13.72□□□□□ -0.21
NTRK3-208ENST00000557856 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
NTRK3-208ENST00000557856 CARMIL2Q6F5E8 1435 aa13.71□□□□□ -0.21
NTRK3-208ENST00000557856 MAPKBP1O60336 1514 aa13.71□□□□□ -0.21
NTRK3-208ENST00000557856 HIRIP3Q9BW71 556 aaPredicted RBP13.7□□□□□ -0.22
NTRK3-208ENST00000557856 TCOF1Q13428 1488 aaKnown RBP13.69□□□□□ -0.22
NTRK3-208ENST00000557856 HFM1A2PYH4 1435 aa13.69□□□□□ -0.22
NTRK3-208ENST00000557856 PTPRKQ15262 1439 aa13.69□□□□□ -0.22
NTRK3-208ENST00000557856 SIN3AQ96ST3 1273 aa13.68□□□□□ -0.22
NTRK3-208ENST00000557856 MIA2Q96PC5 1412 aa13.68□□□□□ -0.22
NTRK3-208ENST00000557856 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
NTRK3-208ENST00000557856 ERCC6L2Q5T890 1561 aa13.67□□□□□ -0.22
NTRK3-208ENST00000557856 PTPRGP23470 1445 aa13.65□□□□□ -0.22
NTRK3-208ENST00000557856 NBR1Q14596 966 aa13.65□□□□□ -0.22
NTRK3-208ENST00000557856 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
NTRK3-208ENST00000557856 IL27Q8NEV9 243 aa13.64□□□□□ -0.23
NTRK3-208ENST00000557856 ZNF777Q9ULD5 760 aaPredicted RBP13.64□□□□□ -0.23
NTRK3-208ENST00000557856 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.64□□□□□ -0.23
NTRK3-208ENST00000557856 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
NTRK3-208ENST00000557856 NAIPQ13075 1403 aa13.63□□□□□ -0.23
NTRK3-208ENST00000557856 PPP4R2Q9NY27 417 aa13.62□□□□□ -0.23
NTRK3-208ENST00000557856 TROQ12816 1431 aaPredicted RBP13.61□□□□□ -0.23
NTRK3-208ENST00000557856 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
NTRK3-208ENST00000557856 AKNAQ7Z591 1439 aa13.6□□□□□ -0.23
NTRK3-208ENST00000557856 UACAQ9BZF9 1416 aa13.6□□□□□ -0.23
NTRK3-208ENST00000557856 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
NTRK3-208ENST00000557856 NOP58Q9Y2X3 529 aaKnown RBP13.6□□□□□ -0.23
NTRK3-208ENST00000557856 PLEKHD1A6NEE1 506 aa13.6□□□□□ -0.23
NTRK3-208ENST00000557856 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
NTRK3-208ENST00000557856 ABCA8O94911 1581 aa13.59□□□□□ -0.23
NTRK3-208ENST00000557856 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
NTRK3-208ENST00000557856 GCC2Q8IWJ2 1684 aa13.57□□□□□ -0.24
NTRK3-208ENST00000557856 ADCY10Q96PN6 1610 aa13.57□□□□□ -0.24
NTRK3-208ENST00000557856 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
NTRK3-208ENST00000557856 ATP10BO94823 1461 aa13.56□□□□□ -0.24
NTRK3-208ENST00000557856 DAPK1P53355 1430 aa13.54□□□□□ -0.24
NTRK3-208ENST00000557856 B4GALNT3Q6L9W6 998 aa13.54□□□□□ -0.24
NTRK3-208ENST00000557856 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
NTRK3-208ENST00000557856 DNMT1P26358 1616 aaKnown RBP13.54□□□□□ -0.24
NTRK3-208ENST00000557856 ITSN2Q9NZM3 1697 aa13.54□□□□□ -0.24
NTRK3-208ENST00000557856 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
NTRK3-208ENST00000557856 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
NTRK3-208ENST00000557856 GPATCH8Q9UKJ3 1502 aaKnown RBP13.53□□□□□ -0.24
NTRK3-208ENST00000557856 KIF14Q15058 1648 aa13.53□□□□□ -0.24
NTRK3-208ENST00000557856 ABCC5O15440 1437 aa13.52□□□□□ -0.25
NTRK3-208ENST00000557856 CAMSAP2Q08AD1 1489 aa13.5□□□□□ -0.25
NTRK3-208ENST00000557856 RTL5Q5HYW3 569 aaPredicted RBP13.49□□□□□ -0.25
NTRK3-208ENST00000557856 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
NTRK3-208ENST00000557856 KDM6BO15054 1643 aa13.48□□□□□ -0.25
NTRK3-208ENST00000557856 ABCC10Q5T3U5 1492 aa13.47□□□□□ -0.25
NTRK3-208ENST00000557856 HNRNPMP52272 730 aaKnown RBP eCLIP13.46□□□□□ -0.25
NTRK3-208ENST00000557856 TONSLQ96HA7 1378 aa13.46□□□□□ -0.26
NTRK3-208ENST00000557856 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
NTRK3-208ENST00000557856 IPO9Q96P70 1041 aaKnown RBP13.45□□□□□ -0.26
NTRK3-208ENST00000557856 ANP32AP39687 249 aaKnown RBP13.44□□□□□ -0.26
NTRK3-208ENST00000557856 DENND4BO75064 1496 aaPredicted RBP13.44□□□□□ -0.26
NTRK3-208ENST00000557856 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
NTRK3-208ENST00000557856 FOXD1Q16676 465 aa13.43□□□□□ -0.26
NTRK3-208ENST00000557856 MPHOSPH9Q99550 1183 aa13.43□□□□□ -0.26
NTRK3-208ENST00000557856 CROCC2H7BZ55 1655 aa13.42□□□□□ -0.26
NTRK3-208ENST00000557856 ADGBQ8N7X0 1667 aa13.42□□□□□ -0.26
NTRK3-208ENST00000557856 NCOA1Q15788 1441 aa13.42□□□□□ -0.26
NTRK3-208ENST00000557856 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
NTRK3-208ENST00000557856 CYB5RLQ6IPT4 315 aa13.41□□□□□ -0.26
NTRK3-208ENST00000557856 ABCC2Q92887 1545 aa13.41□□□□□ -0.26
NTRK3-208ENST00000557856 CCDC184Q52MB2 194 aa13.39□□□□□ -0.27
NTRK3-208ENST00000557856 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
NTRK3-208ENST00000557856 SHANK2Q9UPX8 1470 aa13.39□□□□□ -0.27
NTRK3-208ENST00000557856 FAM9BQ8IZU0 186 aa13.39□□□□□ -0.27
NTRK3-208ENST00000557856 ANKRD30AQ9BXX3 1397 aa13.39□□□□□ -0.27
NTRK3-208ENST00000557856 PKNOX2Q96KN3 472 aa13.38□□□□□ -0.27
NTRK3-208ENST00000557856 KDM5BQ9UGL1 1544 aa13.36□□□□□ -0.27
NTRK3-208ENST00000557856 ZBED9Q6R2W3 1325 aa13.36□□□□□ -0.27
NTRK3-208ENST00000557856 PREX2Q70Z35 1606 aa13.36□□□□□ -0.27
NTRK3-208ENST00000557856 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
NTRK3-208ENST00000557856 ARHGEF5Q12774 1597 aa13.35□□□□□ -0.27
NTRK3-208ENST00000557856 C9orf84Q5VXU9 1444 aa13.35□□□□□ -0.27
NTRK3-208ENST00000557856 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
NTRK3-208ENST00000557856 CDC42BPBQ9Y5S2 1711 aa13.34□□□□□ -0.27
NTRK3-208ENST00000557856 UHRF1BP1LA0JNW5 1464 aa13.34□□□□□ -0.27
NTRK3-208ENST00000557856 EIF5BO60841 1220 aaKnown RBP13.34□□□□□ -0.27
NTRK3-208ENST00000557856 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
NTRK3-208ENST00000557856 ANKRD50Q9ULJ7 1429 aa13.33□□□□□ -0.28
NTRK3-208ENST00000557856 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
NTRK3-208ENST00000557856 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
NTRK3-208ENST00000557856 MBD5Q9P267 1494 aa13.33□□□□□ -0.28
NTRK3-208ENST00000557856 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
NTRK3-208ENST00000557856 PZPP20742 1482 aa13.33□□□□□ -0.28
NTRK3-208ENST00000557856 HSPA5P11021 654 aaKnown RBP13.32□□□□□ -0.28
NTRK3-208ENST00000557856 MRS2Q9HD23 443 aa13.32□□□□□ -0.28
NTRK3-208ENST00000557856 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
NTRK3-208ENST00000557856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.32□□□□□ -0.28
NTRK3-208ENST00000557856 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
NTRK3-208ENST00000557856 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
NTRK3-208ENST00000557856 ZCCHC11Q5TAX3 1644 aaKnown RBP13.32□□□□□ -0.28
NTRK3-208ENST00000557856 RSPH4AQ5TD94 716 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms