RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 MFRPQ9BY79 579 aa10.09□□□□□ -0.79
EFCAB11-213ENST00000557685 TMEM121BQ9BXQ6 578 aaPredicted RBP10.08□□□□□ -0.8
EFCAB11-213ENST00000557685 CABP2Q9NPB3 220 aa10.08□□□□□ -0.8
EFCAB11-213ENST00000557685 EFCAB3Q8N7B9 438 aa10.07□□□□□ -0.8
EFCAB11-213ENST00000557685 NLRP6P59044 892 aa10.06□□□□□ -0.8
EFCAB11-213ENST00000557685 FBXO22Q8NEZ5 403 aa10.03□□□□□ -0.8
EFCAB11-213ENST00000557685 MARVELD3Q96A59 401 aa10.03□□□□□ -0.8
EFCAB11-213ENST00000557685 G3V3G9 751 aa10.02□□□□□ -0.81
EFCAB11-213ENST00000557685 PHF8Q9UPP1 1060 aa10.01□□□□□ -0.81
EFCAB11-213ENST00000557685 NBR1Q14596 966 aa9.99□□□□□ -0.81
EFCAB11-213ENST00000557685 DPY19L2Q6NUT2 758 aa9.99□□□□□ -0.81
EFCAB11-213ENST00000557685 PPP1R37O75864 691 aa9.98□□□□□ -0.81
EFCAB11-213ENST00000557685 EMP3P54852 163 aa9.97□□□□□ -0.81
EFCAB11-213ENST00000557685 CADPS2Q86UW7 1296 aa9.97□□□□□ -0.81
EFCAB11-213ENST00000557685 ILDR1Q86SU0 546 aaPredicted RBP9.96□□□□□ -0.82
EFCAB11-213ENST00000557685 WDR70Q9NW82 654 aa9.96□□□□□ -0.82
EFCAB11-213ENST00000557685 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
EFCAB11-213ENST00000557685 SPNS2Q8IVW8 549 aa9.93□□□□□ -0.82
EFCAB11-213ENST00000557685 P3H3Q8IVL6 736 aa9.92□□□□□ -0.82
EFCAB11-213ENST00000557685 MS4A4AQ96JQ5 239 aa9.92□□□□□ -0.82
EFCAB11-213ENST00000557685 MMRN1Q13201 1228 aa9.91□□□□□ -0.82
EFCAB11-213ENST00000557685 FAM205CA6NFA0 338 aa9.9□□□□□ -0.82
EFCAB11-213ENST00000557685 HS3ST6Q96QI5 342 aa9.89□□□□□ -0.83
EFCAB11-213ENST00000557685 PRKCSHP14314 528 aaPredicted RBP9.88□□□□□ -0.83
EFCAB11-213ENST00000557685 TPRNQ4KMQ1 711 aa9.86□□□□□ -0.83
EFCAB11-213ENST00000557685 ZNF710Q8N1W2 664 aa9.86□□□□□ -0.83
EFCAB11-213ENST00000557685 POTEB3A0JP26 581 aa9.84□□□□□ -0.83
EFCAB11-213ENST00000557685 PDE4AP27815 886 aa9.84□□□□□ -0.83
EFCAB11-213ENST00000557685 POTEBQ6S5H4 581 aa9.84□□□□□ -0.83
EFCAB11-213ENST00000557685 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
EFCAB11-213ENST00000557685 KCNV2Q8TDN2 545 aa9.83□□□□□ -0.84
EFCAB11-213ENST00000557685 DOK7Q18PE1 504 aa9.82□□□□□ -0.84
EFCAB11-213ENST00000557685 E2F4Q16254 413 aa9.81□□□□□ -0.84
EFCAB11-213ENST00000557685 NCKAP5LQ9HCH0 1330 aa9.81□□□□□ -0.84
EFCAB11-213ENST00000557685 ARHGEF1Q92888 912 aaKnown RBP9.8□□□□□ -0.84
EFCAB11-213ENST00000557685 LARP6Q9BRS8 491 aaKnown RBP9.8□□□□□ -0.84
EFCAB11-213ENST00000557685 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
EFCAB11-213ENST00000557685 KRTAP3-2Q9BYR7 98 aa9.8□□□□□ -0.84
EFCAB11-213ENST00000557685 HOXB1P14653 301 aaPredicted RBP9.79□□□□□ -0.84
EFCAB11-213ENST00000557685 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
EFCAB11-213ENST00000557685 RIMBP2O15034 1052 aa9.78□□□□□ -0.84
EFCAB11-213ENST00000557685 MFSD10Q14728 455 aa9.78□□□□□ -0.84
EFCAB11-213ENST00000557685 ERBB3P21860 1342 aa9.78□□□□□ -0.84
EFCAB11-213ENST00000557685 MICALL2Q8IY33 904 aa9.76□□□□□ -0.85
EFCAB11-213ENST00000557685 DDX27Q96GQ7 796 aaKnown RBP9.74□□□□□ -0.85
EFCAB11-213ENST00000557685 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
EFCAB11-213ENST00000557685 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.86
EFCAB11-213ENST00000557685 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
EFCAB11-213ENST00000557685 CAMK2BQ13554 666 aa9.69□□□□□ -0.86
EFCAB11-213ENST00000557685 VARS2Q5ST30 1063 aaKnown RBP9.69□□□□□ -0.86
EFCAB11-213ENST00000557685 ZSWIM6Q9HCJ5 1215 aa9.68□□□□□ -0.86
EFCAB11-213ENST00000557685 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
EFCAB11-213ENST00000557685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.67□□□□□ -0.86
EFCAB11-213ENST00000557685 PPP1R15BQ5SWA1 713 aa9.65□□□□□ -0.86
EFCAB11-213ENST00000557685 TMC2Q8TDI7 906 aa9.64□□□□□ -0.87
EFCAB11-213ENST00000557685 TESPA1A2RU30 521 aaPredicted RBP9.63□□□□□ -0.87
EFCAB11-213ENST00000557685 SEMA3EO15041 775 aa9.63□□□□□ -0.87
EFCAB11-213ENST00000557685 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
EFCAB11-213ENST00000557685 FOXK1P85037 733 aa9.62□□□□□ -0.87
EFCAB11-213ENST00000557685 DSG2Q14126 1118 aa9.62□□□□□ -0.87
EFCAB11-213ENST00000557685 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
EFCAB11-213ENST00000557685 ZNF687Q8N1G0 1237 aa9.61□□□□□ -0.87
EFCAB11-213ENST00000557685 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
EFCAB11-213ENST00000557685 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
EFCAB11-213ENST00000557685 RNF166Q96A37 237 aaPredicted RBP9.6□□□□□ -0.87
EFCAB11-213ENST00000557685 KIF3CO14782 793 aa9.58□□□□□ -0.88
EFCAB11-213ENST00000557685 C2orf72A6NCS6 295 aa9.57□□□□□ -0.88
EFCAB11-213ENST00000557685 PLPP6Q8IY26 295 aa9.56□□□□□ -0.88
EFCAB11-213ENST00000557685 MYT1LQ9UL68 1186 aa9.56□□□□□ -0.88
EFCAB11-213ENST00000557685 KHSRPQ92945 711 aaKnown RBP eCLIP9.55□□□□□ -0.883e-8■■■■□ 25.7
EFCAB11-213ENST00000557685 EMILIN3Q9NT22 766 aa9.55□□□□□ -0.88
EFCAB11-213ENST00000557685 SPDYE16A6NNV3 312 aaPredicted RBP9.54□□□□□ -0.88
EFCAB11-213ENST00000557685 ZNF316A6NFI3 1004 aaPredicted RBP9.53□□□□□ -0.88
EFCAB11-213ENST00000557685 DPYSL4O14531 572 aa9.52□□□□□ -0.89
EFCAB11-213ENST00000557685 ANKRD13DQ6ZTN6 518 aa9.52□□□□□ -0.89
EFCAB11-213ENST00000557685 PTGER2P43116 358 aa9.5□□□□□ -0.89
EFCAB11-213ENST00000557685 ZC3H15Q8WU90 426 aaKnown RBP9.5□□□□□ -0.89
EFCAB11-213ENST00000557685 PDIA6Q15084 440 aa9.49□□□□□ -0.89
EFCAB11-213ENST00000557685 MAP3K9P80192 1104 aa9.48□□□□□ -0.89
EFCAB11-213ENST00000557685 NUDT7P0C024 238 aa9.47□□□□□ -0.89
EFCAB11-213ENST00000557685 MLLT3P42568 568 aaPredicted RBP9.47□□□□□ -0.89
EFCAB11-213ENST00000557685 LSM11P83369 360 aaKnown RBP eCLIP9.44□□□□□ -0.9
EFCAB11-213ENST00000557685 OXER1Q8TDS5 423 aa9.44□□□□□ -0.9
EFCAB11-213ENST00000557685 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
EFCAB11-213ENST00000557685 TBC1D12O60347 775 aa9.42□□□□□ -0.9
EFCAB11-213ENST00000557685 ZMYND10O75800 440 aa9.42□□□□□ -0.9
EFCAB11-213ENST00000557685 RBM26Q5T8P6 1007 aaKnown RBP9.42□□□□□ -0.9
EFCAB11-213ENST00000557685 LHX6Q9UPM6 363 aa9.42□□□□□ -0.9
EFCAB11-213ENST00000557685 UPF1Q92900 1129 aaKnown RBP eCLIP9.41□□□□□ -0.9
EFCAB11-213ENST00000557685 SLC34A2O95436 690 aa9.4□□□□□ -0.9
EFCAB11-213ENST00000557685 PBX2P40425 430 aa9.4□□□□□ -0.9
EFCAB11-213ENST00000557685 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
EFCAB11-213ENST00000557685 GPIHBP1Q8IV16 184 aa9.39□□□□□ -0.91
EFCAB11-213ENST00000557685 PTCD2Q8WV60 388 aaKnown RBP9.39□□□□□ -0.91
EFCAB11-213ENST00000557685 AXIN2Q9Y2T1 843 aa9.38□□□□□ -0.91
EFCAB11-213ENST00000557685 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
EFCAB11-213ENST00000557685 GRXCR2A6NFK2 248 aa9.36□□□□□ -0.91
EFCAB11-213ENST00000557685 EVI5O60447 810 aa9.35□□□□□ -0.91
EFCAB11-213ENST00000557685 POTEEQ6S8J3 1075 aa9.35□□□□□ -0.91
EFCAB11-213ENST00000557685 OSBPP22059 807 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 911 ms