RNA–Protein interactions for RNA: ENST00000557659.5

CNIH1-206, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2

Gene CNIH1, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-206ENST00000557659 LRRIQ1Q96JM4 1722 aa18.22■□□□□ 0.51
CNIH1-206ENST00000557659 TSPOAP1O95153 1857 aa18.22■□□□□ 0.51
CNIH1-206ENST00000557659 TROQ12816 1431 aaPredicted RBP18.21■□□□□ 0.51
CNIH1-206ENST00000557659 PHLDB1Q86UU1 1377 aa18.2■□□□□ 0.5
CNIH1-206ENST00000557659 KIF14Q15058 1648 aa18.2■□□□□ 0.5
CNIH1-206ENST00000557659 PPRC1Q5VV67 1664 aaKnown RBP18.18■□□□□ 0.5
CNIH1-206ENST00000557659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.16■□□□□ 0.5
CNIH1-206ENST00000557659 CFAP74Q9C0B2 1584 aa18.16■□□□□ 0.5
CNIH1-206ENST00000557659 MAP3K1Q13233 1512 aa18.14■□□□□ 0.49
CNIH1-206ENST00000557659 KDM6BO15054 1643 aa18.14■□□□□ 0.49
CNIH1-206ENST00000557659 NEO1Q92859 1461 aa18.14■□□□□ 0.49
CNIH1-206ENST00000557659 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
CNIH1-206ENST00000557659 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
CNIH1-206ENST00000557659 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
CNIH1-206ENST00000557659 EHBP1L1Q8N3D4 1523 aa18.11■□□□□ 0.49
CNIH1-206ENST00000557659 MYO5CQ9NQX4 1742 aa18.1■□□□□ 0.49
CNIH1-206ENST00000557659 TTC37Q6PGP7 1564 aa18.1■□□□□ 0.49
CNIH1-206ENST00000557659 TIAM1Q13009 1591 aa18.08■□□□□ 0.49
CNIH1-206ENST00000557659 PLCH2O75038 1416 aa18.08■□□□□ 0.49
CNIH1-206ENST00000557659 APLP2Q06481 763 aa18.08■□□□□ 0.48
CNIH1-206ENST00000557659 FANCAO15360 1455 aa18.07■□□□□ 0.48
CNIH1-206ENST00000557659 EFCAB2Q5VUJ9 269 aa18.03■□□□□ 0.48
CNIH1-206ENST00000557659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
CNIH1-206ENST00000557659 PREX2Q70Z35 1606 aa18.02■□□□□ 0.48
CNIH1-206ENST00000557659 SUPT6HQ7KZ85 1726 aaKnown RBP18.02■□□□□ 0.48
CNIH1-206ENST00000557659 AKNAQ7Z591 1439 aa18.01■□□□□ 0.47
CNIH1-206ENST00000557659 ARHGAP5Q13017 1502 aa18.01■□□□□ 0.47
CNIH1-206ENST00000557659 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
CNIH1-206ENST00000557659 ITSN2Q9NZM3 1697 aa17.99■□□□□ 0.47
CNIH1-206ENST00000557659 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
CNIH1-206ENST00000557659 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
CNIH1-206ENST00000557659 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
CNIH1-206ENST00000557659 DENND4BO75064 1496 aaPredicted RBP17.97■□□□□ 0.47
CNIH1-206ENST00000557659 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
CNIH1-206ENST00000557659 CDC42BPBQ9Y5S2 1711 aa17.97■□□□□ 0.47
CNIH1-206ENST00000557659 ADGRL1O94910 1474 aa17.96■□□□□ 0.47
CNIH1-206ENST00000557659 COL17A1Q9UMD9 1497 aaPredicted RBP17.96■□□□□ 0.47
CNIH1-206ENST00000557659 GPATCH8Q9UKJ3 1502 aaKnown RBP17.95■□□□□ 0.46
CNIH1-206ENST00000557659 PLEKHH2Q8IVE3 1493 aa17.95■□□□□ 0.46
CNIH1-206ENST00000557659 NCOA2Q15596 1464 aa17.94■□□□□ 0.46
CNIH1-206ENST00000557659 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
CNIH1-206ENST00000557659 SCAPERQ9BY12 1400 aa17.91■□□□□ 0.46
CNIH1-206ENST00000557659 ZNF518AQ6AHZ1 1483 aa17.91■□□□□ 0.46
CNIH1-206ENST00000557659 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
CNIH1-206ENST00000557659 RICTORQ6R327 1708 aa17.91■□□□□ 0.46
CNIH1-206ENST00000557659 POGZQ7Z3K3 1410 aa17.9■□□□□ 0.46
CNIH1-206ENST00000557659 ABCC1P33527 1531 aa17.89■□□□□ 0.45
CNIH1-206ENST00000557659 ZMYM4Q5VZL5 1548 aa17.89■□□□□ 0.45
CNIH1-206ENST00000557659 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.45
CNIH1-206ENST00000557659 FRMPD1Q5SYB0 1578 aa17.87■□□□□ 0.45
CNIH1-206ENST00000557659 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
CNIH1-206ENST00000557659 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
CNIH1-206ENST00000557659 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
CNIH1-206ENST00000557659 SAMD9LQ8IVG5 1584 aa17.85■□□□□ 0.45
CNIH1-206ENST00000557659 KDM5CP41229 1560 aa17.84■□□□□ 0.45
CNIH1-206ENST00000557659 RSPH4AQ5TD94 716 aa17.84■□□□□ 0.45
CNIH1-206ENST00000557659 MYOM3Q5VTT5 1437 aa17.83■□□□□ 0.45
CNIH1-206ENST00000557659 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
CNIH1-206ENST00000557659 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
CNIH1-206ENST00000557659 ARHGEF40Q8TER5 1519 aa17.82■□□□□ 0.44
CNIH1-206ENST00000557659 ZFYVE16Q7Z3T8 1539 aa17.81■□□□□ 0.44
CNIH1-206ENST00000557659 HECW2Q9P2P5 1572 aa17.8■□□□□ 0.44
CNIH1-206ENST00000557659 SYCP2Q9BX26 1530 aa17.8■□□□□ 0.44
CNIH1-206ENST00000557659 MLH3Q9UHC1 1453 aa17.8■□□□□ 0.44
CNIH1-206ENST00000557659 CAMSAP2Q08AD1 1489 aa17.78■□□□□ 0.44
CNIH1-206ENST00000557659 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.44
CNIH1-206ENST00000557659 AFAP1Q8N556 730 aa17.76■□□□□ 0.43
CNIH1-206ENST00000557659 ARHGEF5Q12774 1597 aa17.75■□□□□ 0.43
CNIH1-206ENST00000557659 TRAPPC8Q9Y2L5 1435 aa17.75■□□□□ 0.43
CNIH1-206ENST00000557659 MBD5Q9P267 1494 aa17.75■□□□□ 0.43
CNIH1-206ENST00000557659 MYT1LQ9UL68 1186 aa17.74■□□□□ 0.43
CNIH1-206ENST00000557659 ATP10AO60312 1499 aa17.74■□□□□ 0.43
CNIH1-206ENST00000557659 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
CNIH1-206ENST00000557659 RTEL1-TNFRSF6BF6WH68 1400 aa17.73■□□□□ 0.43
CNIH1-206ENST00000557659 HNRNPMP52272 730 aaKnown RBP eCLIP17.73■□□□□ 0.432e-8■■■■■ 32.7
CNIH1-206ENST00000557659 REREQ9P2R6 1566 aa17.73■□□□□ 0.43
CNIH1-206ENST00000557659 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
CNIH1-206ENST00000557659 C9orf84Q5VXU9 1444 aa17.72■□□□□ 0.43
CNIH1-206ENST00000557659 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
CNIH1-206ENST00000557659 FKBP8Q14318 412 aa17.71■□□□□ 0.43
CNIH1-206ENST00000557659 PTPN23Q9H3S7 1636 aa17.71■□□□□ 0.43
CNIH1-206ENST00000557659 INO80Q9ULG1 1556 aaPredicted RBP17.7■□□□□ 0.42
CNIH1-206ENST00000557659 TCOF1Q13428 1488 aaKnown RBP17.7■□□□□ 0.42
CNIH1-206ENST00000557659 TSPY4P0CV99 314 aa17.7■□□□□ 0.42
CNIH1-206ENST00000557659 TSPY10P0CW01 314 aa17.7■□□□□ 0.42
CNIH1-206ENST00000557659 ATP7AQ04656 1500 aa17.7■□□□□ 0.42
CNIH1-206ENST00000557659 YEATS2Q9ULM3 1422 aa17.7■□□□□ 0.42
CNIH1-206ENST00000557659 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
CNIH1-206ENST00000557659 KIDINS220Q9ULH0 1771 aa17.69■□□□□ 0.42
CNIH1-206ENST00000557659 DIP2CQ9Y2E4 1556 aa17.69■□□□□ 0.42
CNIH1-206ENST00000557659 ABCA6Q8N139 1617 aa17.66■□□□□ 0.42
CNIH1-206ENST00000557659 ADGBQ8N7X0 1667 aa17.66■□□□□ 0.42
CNIH1-206ENST00000557659 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
CNIH1-206ENST00000557659 MAST1Q9Y2H9 1570 aa17.66■□□□□ 0.42
CNIH1-206ENST00000557659 AGLP35573 1532 aa17.65■□□□□ 0.42
CNIH1-206ENST00000557659 SHANK2Q9UPX8 1470 aa17.64■□□□□ 0.41
CNIH1-206ENST00000557659 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
CNIH1-206ENST00000557659 BCORL1Q5H9F3 1711 aa17.63■□□□□ 0.41
CNIH1-206ENST00000557659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.63■□□□□ 0.41
CNIH1-206ENST00000557659 DNMT1P26358 1616 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms