RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
PRKCH-227ENST00000557599 KDM5CP41229 1560 aa16.65■□□□□ 0.26
PRKCH-227ENST00000557599 PCF11O94913 1555 aaKnown RBP16.64■□□□□ 0.25
PRKCH-227ENST00000557599 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
PRKCH-227ENST00000557599 YEATS2Q9ULM3 1422 aa16.63■□□□□ 0.25
PRKCH-227ENST00000557599 RIMS1Q86UR5 1692 aaKnown RBP16.63■□□□□ 0.25
PRKCH-227ENST00000557599 CDC42BPBQ9Y5S2 1711 aa16.62■□□□□ 0.25
PRKCH-227ENST00000557599 PREX2Q70Z35 1606 aa16.61■□□□□ 0.25
PRKCH-227ENST00000557599 LMTK3Q96Q04 1460 aa16.61■□□□□ 0.25
PRKCH-227ENST00000557599 REREQ9P2R6 1566 aa16.6■□□□□ 0.25
PRKCH-227ENST00000557599 CASKIN1Q8WXD9 1431 aa16.59■□□□□ 0.25
PRKCH-227ENST00000557599 SCAPERQ9BY12 1400 aa16.59■□□□□ 0.25
PRKCH-227ENST00000557599 CCDC18Q5T9S5 1454 aa16.58■□□□□ 0.24
PRKCH-227ENST00000557599 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.24
PRKCH-227ENST00000557599 FER1L4A9Z1Z3 1794 aa16.58■□□□□ 0.24
PRKCH-227ENST00000557599 ZNF518AQ6AHZ1 1483 aa16.56■□□□□ 0.24
PRKCH-227ENST00000557599 CDC42BPAQ5VT25 1732 aa16.56■□□□□ 0.24
PRKCH-227ENST00000557599 ABCC1P33527 1531 aa16.55■□□□□ 0.24
PRKCH-227ENST00000557599 FYCO1Q9BQS8 1478 aa16.55■□□□□ 0.24
PRKCH-227ENST00000557599 DIP2CQ9Y2E4 1556 aa16.55■□□□□ 0.24
PRKCH-227ENST00000557599 ITSN2Q9NZM3 1697 aa16.54■□□□□ 0.24
PRKCH-227ENST00000557599 ATP10AO60312 1499 aa16.54■□□□□ 0.24
PRKCH-227ENST00000557599 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
PRKCH-227ENST00000557599 ARHGAP5Q13017 1502 aa16.53■□□□□ 0.24
PRKCH-227ENST00000557599 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
PRKCH-227ENST00000557599 ABCA6Q8N139 1617 aa16.52■□□□□ 0.24
PRKCH-227ENST00000557599 MLH3Q9UHC1 1453 aa16.51■□□□□ 0.23
PRKCH-227ENST00000557599 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
PRKCH-227ENST00000557599 EFCAB2Q5VUJ9 269 aa16.5■□□□□ 0.23
PRKCH-227ENST00000557599 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
PRKCH-227ENST00000557599 APLP2Q06481 763 aa16.48■□□□□ 0.23
PRKCH-227ENST00000557599 KIDINS220Q9ULH0 1771 aa16.48■□□□□ 0.23
PRKCH-227ENST00000557599 PREX1Q8TCU6 1659 aa16.47■□□□□ 0.23
PRKCH-227ENST00000557599 AGLP35573 1532 aa16.47■□□□□ 0.23
PRKCH-227ENST00000557599 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
PRKCH-227ENST00000557599 SAMD9LQ8IVG5 1584 aa16.46■□□□□ 0.23
PRKCH-227ENST00000557599 TRAPPC8Q9Y2L5 1435 aa16.44■□□□□ 0.22
PRKCH-227ENST00000557599 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
PRKCH-227ENST00000557599 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
PRKCH-227ENST00000557599 INO80Q9ULG1 1556 aaPredicted RBP16.41■□□□□ 0.22
PRKCH-227ENST00000557599 C3P01024 1663 aa16.4■□□□□ 0.22
PRKCH-227ENST00000557599 ATP1B4Q9UN42 357 aaPredicted RBP16.4■□□□□ 0.22
PRKCH-227ENST00000557599 PLXNC1O60486 1568 aa16.39■□□□□ 0.21
PRKCH-227ENST00000557599 SYCP2Q9BX26 1530 aa16.38■□□□□ 0.21
PRKCH-227ENST00000557599 MROH2AA6NES4 1674 aa16.37■□□□□ 0.21
PRKCH-227ENST00000557599 STRCQ7RTU9 1775 aa16.37■□□□□ 0.21
PRKCH-227ENST00000557599 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
PRKCH-227ENST00000557599 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
PRKCH-227ENST00000557599 EHBP1L1Q8N3D4 1523 aa16.34■□□□□ 0.21
PRKCH-227ENST00000557599 ATP7AQ04656 1500 aa16.33■□□□□ 0.2
PRKCH-227ENST00000557599 FBXO41Q8TF61 875 aa16.32■□□□□ 0.2
PRKCH-227ENST00000557599 PLEKHH2Q8IVE3 1493 aa16.31■□□□□ 0.2
PRKCH-227ENST00000557599 MLECQ14165 292 aa16.31■□□□□ 0.2
PRKCH-227ENST00000557599 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
PRKCH-227ENST00000557599 HSPA2P54652 639 aa16.3■□□□□ 0.2
PRKCH-227ENST00000557599 ADGBQ8N7X0 1667 aa16.29■□□□□ 0.2
PRKCH-227ENST00000557599 MBD5Q9P267 1494 aa16.29■□□□□ 0.2
PRKCH-227ENST00000557599 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
PRKCH-227ENST00000557599 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.19
PRKCH-227ENST00000557599 UHRF1BP1Q6BDS2 1440 aa16.27■□□□□ 0.19
PRKCH-227ENST00000557599 MAP3K1Q13233 1512 aa16.26■□□□□ 0.19
PRKCH-227ENST00000557599 ZNF142P52746 1687 aaPredicted RBP16.26■□□□□ 0.19
PRKCH-227ENST00000557599 CEBPAP49715 358 aaPredicted RBP16.25■□□□□ 0.19
PRKCH-227ENST00000557599 NPATQ14207 1427 aa16.25■□□□□ 0.19
PRKCH-227ENST00000557599 CLTCQ00610 1675 aaKnown RBP16.24■□□□□ 0.19
PRKCH-227ENST00000557599 A2MP01023 1474 aa16.23■□□□□ 0.19
PRKCH-227ENST00000557599 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
PRKCH-227ENST00000557599 CCNB3Q8WWL7 1395 aa16.23■□□□□ 0.19
PRKCH-227ENST00000557599 RTEL1-TNFRSF6BF6WH68 1400 aa16.21■□□□□ 0.19
PRKCH-227ENST00000557599 MYO3AQ8NEV4 1616 aa16.21■□□□□ 0.19
PRKCH-227ENST00000557599 PTPRTO14522 1441 aa16.2■□□□□ 0.18
PRKCH-227ENST00000557599 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
PRKCH-227ENST00000557599 NCOA2Q15596 1464 aa16.19■□□□□ 0.18
PRKCH-227ENST00000557599 HNRNPMP52272 730 aaKnown RBP eCLIP16.19■□□□□ 0.18
PRKCH-227ENST00000557599 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
PRKCH-227ENST00000557599 FAM135AQ9P2D6 1515 aa16.19■□□□□ 0.18
PRKCH-227ENST00000557599 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
PRKCH-227ENST00000557599 ARHGEF5Q12774 1597 aa16.18■□□□□ 0.18
PRKCH-227ENST00000557599 LTBP4Q8N2S1 1624 aa16.17■□□□□ 0.18
PRKCH-227ENST00000557599 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
PRKCH-227ENST00000557599 PPARGC1BQ86YN6 1023 aaKnown RBP16.17■□□□□ 0.18
PRKCH-227ENST00000557599 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
PRKCH-227ENST00000557599 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
PRKCH-227ENST00000557599 ZMYM3Q14202 1370 aa16.15■□□□□ 0.18
PRKCH-227ENST00000557599 PTPRKQ15262 1439 aa16.15■□□□□ 0.18
PRKCH-227ENST00000557599 ZNF777Q9ULD5 760 aaPredicted RBP16.15■□□□□ 0.18
PRKCH-227ENST00000557599 CEP170BQ9Y4F5 1589 aaPredicted RBP16.15■□□□□ 0.18
PRKCH-227ENST00000557599 LRRC9Q6ZRR7 1453 aa16.15■□□□□ 0.18
PRKCH-227ENST00000557599 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
PRKCH-227ENST00000557599 CERKQ8TCT0 537 aa16.14■□□□□ 0.17
PRKCH-227ENST00000557599 CAMSAP1Q5T5Y3 1602 aa16.14■□□□□ 0.17
PRKCH-227ENST00000557599 MAST1Q9Y2H9 1570 aa16.13■□□□□ 0.17
PRKCH-227ENST00000557599 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
PRKCH-227ENST00000557599 PLA2R1Q13018 1463 aa16.13■□□□□ 0.17
PRKCH-227ENST00000557599 TCOF1Q13428 1488 aaKnown RBP16.12■□□□□ 0.17
PRKCH-227ENST00000557599 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
PRKCH-227ENST00000557599 DHX29Q7Z478 1369 aaKnown RBP16.11■□□□□ 0.17
PRKCH-227ENST00000557599 RNF17Q9BXT8 1623 aaKnown RBP16.1■□□□□ 0.17
PRKCH-227ENST00000557599 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
PRKCH-227ENST00000557599 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms