RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
PRKCH-226ENST00000557585 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
PRKCH-226ENST00000557585 KDM6BO15054 1643 aa16.63■□□□□ 0.25
PRKCH-226ENST00000557585 TEX14Q8IWB6 1497 aa16.63■□□□□ 0.25
PRKCH-226ENST00000557585 KANK4Q5T7N3 995 aaPredicted RBP16.62■□□□□ 0.25
PRKCH-226ENST00000557585 RAPGEF3O95398 923 aa16.59■□□□□ 0.25
PRKCH-226ENST00000557585 PLCH2O75038 1416 aa16.59■□□□□ 0.25
PRKCH-226ENST00000557585 FANCAO15360 1455 aa16.57■□□□□ 0.24
PRKCH-226ENST00000557585 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
PRKCH-226ENST00000557585 TIAM1Q13009 1591 aa16.56■□□□□ 0.24
PRKCH-226ENST00000557585 AKNAQ7Z591 1439 aa16.55■□□□□ 0.24
PRKCH-226ENST00000557585 ARAP3Q8WWN8 1544 aa16.54■□□□□ 0.24
PRKCH-226ENST00000557585 NEO1Q92859 1461 aa16.54■□□□□ 0.24
PRKCH-226ENST00000557585 GPATCH8Q9UKJ3 1502 aaKnown RBP16.52■□□□□ 0.24
PRKCH-226ENST00000557585 FRMPD1Q5SYB0 1578 aa16.51■□□□□ 0.23
PRKCH-226ENST00000557585 ARHGAP5Q13017 1502 aa16.51■□□□□ 0.23
PRKCH-226ENST00000557585 LRRC9Q6ZRR7 1453 aa16.51■□□□□ 0.23
PRKCH-226ENST00000557585 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
PRKCH-226ENST00000557585 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
PRKCH-226ENST00000557585 EFCAB2Q5VUJ9 269 aa16.5■□□□□ 0.23
PRKCH-226ENST00000557585 ZNF777Q9ULD5 760 aaPredicted RBP16.5■□□□□ 0.23
PRKCH-226ENST00000557585 SCAPERQ9BY12 1400 aa16.5■□□□□ 0.23
PRKCH-226ENST00000557585 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
PRKCH-226ENST00000557585 ZNF644Q9H582 1327 aaPredicted RBP16.49■□□□□ 0.23
PRKCH-226ENST00000557585 CDC42BPBQ9Y5S2 1711 aa16.49■□□□□ 0.23
PRKCH-226ENST00000557585 ARHGEF12Q9NZN5 1544 aa16.49■□□□□ 0.23
PRKCH-226ENST00000557585 ADGRL1O94910 1474 aa16.48■□□□□ 0.23
PRKCH-226ENST00000557585 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
PRKCH-226ENST00000557585 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
PRKCH-226ENST00000557585 CCNB3Q8WWL7 1395 aa16.48■□□□□ 0.23
PRKCH-226ENST00000557585 PREX2Q70Z35 1606 aa16.47■□□□□ 0.23
PRKCH-226ENST00000557585 CDC42BPAQ5VT25 1732 aa16.47■□□□□ 0.23
PRKCH-226ENST00000557585 DENND4BO75064 1496 aaPredicted RBP16.47■□□□□ 0.23
PRKCH-226ENST00000557585 AFAP1Q8N556 730 aa16.46■□□□□ 0.23
PRKCH-226ENST00000557585 PHLDB1Q86UU1 1377 aa16.46■□□□□ 0.23
PRKCH-226ENST00000557585 CFDP1Q9UEE9 299 aaPredicted RBP16.45■□□□□ 0.22
PRKCH-226ENST00000557585 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
PRKCH-226ENST00000557585 TRAPPC8Q9Y2L5 1435 aa16.45■□□□□ 0.22
PRKCH-226ENST00000557585 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
PRKCH-226ENST00000557585 POGZQ7Z3K3 1410 aa16.44■□□□□ 0.22
PRKCH-226ENST00000557585 SAMD9LQ8IVG5 1584 aa16.43■□□□□ 0.22
PRKCH-226ENST00000557585 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
PRKCH-226ENST00000557585 YEATS2Q9ULM3 1422 aa16.43■□□□□ 0.22
PRKCH-226ENST00000557585 CFAP74Q9C0B2 1584 aa16.42■□□□□ 0.22
PRKCH-226ENST00000557585 RICTORQ6R327 1708 aa16.42■□□□□ 0.22
PRKCH-226ENST00000557585 APLP2Q06481 763 aa16.41■□□□□ 0.22
PRKCH-226ENST00000557585 ABCC1P33527 1531 aa16.4■□□□□ 0.22
PRKCH-226ENST00000557585 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
PRKCH-226ENST00000557585 KDM4FA0A1W2PPD8 638 aa16.39■□□□□ 0.21
PRKCH-226ENST00000557585 SYCP2Q9BX26 1530 aa16.39■□□□□ 0.21
PRKCH-226ENST00000557585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.36■□□□□ 0.21
PRKCH-226ENST00000557585 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
PRKCH-226ENST00000557585 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
PRKCH-226ENST00000557585 SIGLEC1Q9BZZ2 1709 aa16.34■□□□□ 0.21
PRKCH-226ENST00000557585 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
PRKCH-226ENST00000557585 MYOM3Q5VTT5 1437 aa16.33■□□□□ 0.2
PRKCH-226ENST00000557585 CAMSAP2Q08AD1 1489 aa16.33■□□□□ 0.2
PRKCH-226ENST00000557585 ZNF518AQ6AHZ1 1483 aa16.33■□□□□ 0.2
PRKCH-226ENST00000557585 KDM5CP41229 1560 aa16.33■□□□□ 0.2
PRKCH-226ENST00000557585 ZFYVE16Q7Z3T8 1539 aa16.32■□□□□ 0.2
PRKCH-226ENST00000557585 ARHGEF40Q8TER5 1519 aa16.32■□□□□ 0.2
PRKCH-226ENST00000557585 MYT1LQ9UL68 1186 aa16.32■□□□□ 0.2
PRKCH-226ENST00000557585 KIAA1107Q9UPP5 1409 aa16.31■□□□□ 0.2
PRKCH-226ENST00000557585 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
PRKCH-226ENST00000557585 ABCA6Q8N139 1617 aa16.27■□□□□ 0.2
PRKCH-226ENST00000557585 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.2
PRKCH-226ENST00000557585 ARID4BQ4LE39 1312 aaPredicted RBP16.27■□□□□ 0.2
PRKCH-226ENST00000557585 DIP2CQ9Y2E4 1556 aa16.27■□□□□ 0.2
PRKCH-226ENST00000557585 MLECQ14165 292 aa16.27■□□□□ 0.2
PRKCH-226ENST00000557585 MAGI2Q86UL8 1455 aa16.27■□□□□ 0.19
PRKCH-226ENST00000557585 PLEKHH2Q8IVE3 1493 aa16.27■□□□□ 0.19
PRKCH-226ENST00000557585 MLH3Q9UHC1 1453 aa16.27■□□□□ 0.19
PRKCH-226ENST00000557585 HECW2Q9P2P5 1572 aa16.26■□□□□ 0.19
PRKCH-226ENST00000557585 FGD6Q6ZV73 1430 aa16.26■□□□□ 0.19
PRKCH-226ENST00000557585 KIDINS220Q9ULH0 1771 aa16.26■□□□□ 0.19
PRKCH-226ENST00000557585 ATP10AO60312 1499 aa16.25■□□□□ 0.19
PRKCH-226ENST00000557585 MIA2Q96PC5 1412 aa16.24■□□□□ 0.19
PRKCH-226ENST00000557585 C9orf84Q5VXU9 1444 aa16.22■□□□□ 0.19
PRKCH-226ENST00000557585 ATP7AQ04656 1500 aa16.22■□□□□ 0.19
PRKCH-226ENST00000557585 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
PRKCH-226ENST00000557585 CCDC141Q6ZP82 1450 aa16.22■□□□□ 0.19
PRKCH-226ENST00000557585 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.19
PRKCH-226ENST00000557585 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
PRKCH-226ENST00000557585 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
PRKCH-226ENST00000557585 ABCC5O15440 1437 aa16.19■□□□□ 0.18
PRKCH-226ENST00000557585 ARHGEF5Q12774 1597 aa16.18■□□□□ 0.18
PRKCH-226ENST00000557585 BCORL1Q5H9F3 1711 aa16.17■□□□□ 0.18
PRKCH-226ENST00000557585 CHIC2Q9UKJ5 165 aa16.17■□□□□ 0.18
PRKCH-226ENST00000557585 ADAMTSL3P82987 1691 aa16.16■□□□□ 0.18
PRKCH-226ENST00000557585 MADDQ8WXG6 1647 aa16.16■□□□□ 0.18
PRKCH-226ENST00000557585 DAPK1P53355 1430 aa16.15■□□□□ 0.18
PRKCH-226ENST00000557585 PTPRKQ15262 1439 aa16.15■□□□□ 0.18
PRKCH-226ENST00000557585 A2MP01023 1474 aa16.15■□□□□ 0.18
PRKCH-226ENST00000557585 RTEL1-TNFRSF6BF6WH68 1400 aa16.14■□□□□ 0.17
PRKCH-226ENST00000557585 TSPY4P0CV99 314 aa16.14■□□□□ 0.17
PRKCH-226ENST00000557585 TSPY10P0CW01 314 aa16.14■□□□□ 0.17
PRKCH-226ENST00000557585 RSPH4AQ5TD94 716 aa16.13■□□□□ 0.17
PRKCH-226ENST00000557585 REREQ9P2R6 1566 aa16.12■□□□□ 0.17
PRKCH-226ENST00000557585 ITGAEP38570 1179 aa16.11■□□□□ 0.17
PRKCH-226ENST00000557585 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms