RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 AKNAQ7Z591 1439 aa10.81□□□□□ -0.68
SV2B-206ENST00000557410 IRX6P78412 446 aaPredicted RBP10.8□□□□□ -0.68
SV2B-206ENST00000557410 KDM6BO15054 1643 aa10.8□□□□□ -0.68
SV2B-206ENST00000557410 KIAA0586Q9BVV6 1533 aa10.8□□□□□ -0.68
SV2B-206ENST00000557410 HSPA5P11021 654 aaKnown RBP10.8□□□□□ -0.68
SV2B-206ENST00000557410 FAM9BQ8IZU0 186 aa10.8□□□□□ -0.68
SV2B-206ENST00000557410 PLEKHD1A6NEE1 506 aa10.79□□□□□ -0.68
SV2B-206ENST00000557410 EIF4G2P78344 907 aaKnown RBP eCLIP10.79□□□□□ -0.68
SV2B-206ENST00000557410 KIAA0556O60303 1618 aa10.78□□□□□ -0.68
SV2B-206ENST00000557410 KDM5BQ9UGL1 1544 aa10.78□□□□□ -0.68
SV2B-206ENST00000557410 ZNF644Q9H582 1327 aaPredicted RBP10.78□□□□□ -0.68
SV2B-206ENST00000557410 L3MBTL2Q969R5 705 aa10.78□□□□□ -0.68
SV2B-206ENST00000557410 DAPK1P53355 1430 aa10.78□□□□□ -0.68
SV2B-206ENST00000557410 DISP1Q96F81 1524 aa10.77□□□□□ -0.68
SV2B-206ENST00000557410 DENND4BO75064 1496 aaPredicted RBP10.77□□□□□ -0.69
SV2B-206ENST00000557410 GRIN2AQ12879 1464 aa10.77□□□□□ -0.69
SV2B-206ENST00000557410 SLC4A1APQ9BWU0 796 aaKnown RBP10.76□□□□□ -0.69
SV2B-206ENST00000557410 NUP153P49790 1475 aaKnown RBP10.76□□□□□ -0.69
SV2B-206ENST00000557410 RAPGEF6Q8TEU7 1601 aa10.76□□□□□ -0.69
SV2B-206ENST00000557410 WASHC2AQ641Q2 1341 aa10.75□□□□□ -0.69
SV2B-206ENST00000557410 NPM2Q86SE8 214 aaKnown RBP10.75□□□□□ -0.69
SV2B-206ENST00000557410 ABCC5O15440 1437 aa10.75□□□□□ -0.69
SV2B-206ENST00000557410 ROCK1Q13464 1354 aa10.75□□□□□ -0.69
SV2B-206ENST00000557410 CFDP1Q9UEE9 299 aaPredicted RBP10.75□□□□□ -0.69
SV2B-206ENST00000557410 EIF4G3O43432 1585 aaKnown RBP10.74□□□□□ -0.69
SV2B-206ENST00000557410 ANP32AP39687 249 aaKnown RBP10.74□□□□□ -0.69
SV2B-206ENST00000557410 TSHZ2Q9NRE2 1034 aa10.74□□□□□ -0.69
SV2B-206ENST00000557410 DNMT1P26358 1616 aaKnown RBP10.73□□□□□ -0.69
SV2B-206ENST00000557410 CARMIL2Q6F5E8 1435 aa10.72□□□□□ -0.69
SV2B-206ENST00000557410 PRG4Q92954 1404 aaPredicted RBP10.72□□□□□ -0.69
SV2B-206ENST00000557410 ANKRD30BQ9BXX2 1392 aa10.72□□□□□ -0.69
SV2B-206ENST00000557410 TROQ12816 1431 aaPredicted RBP10.71□□□□□ -0.69
SV2B-206ENST00000557410 TSPY4P0CV99 314 aa10.71□□□□□ -0.69
SV2B-206ENST00000557410 TSPY10P0CW01 314 aa10.71□□□□□ -0.69
SV2B-206ENST00000557410 ANP32EQ9BTT0 268 aa10.7□□□□□ -0.7
SV2B-206ENST00000557410 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
SV2B-206ENST00000557410 RPRD2Q5VT52 1461 aaKnown RBP10.7□□□□□ -0.7
SV2B-206ENST00000557410 PLB1Q6P1J6 1458 aa10.7□□□□□ -0.7
SV2B-206ENST00000557410 MAGI1Q96QZ7 1491 aaPredicted RBP10.7□□□□□ -0.7
SV2B-206ENST00000557410 NBR1Q14596 966 aa10.69□□□□□ -0.7
SV2B-206ENST00000557410 NBPF8Q3BBV2 869 aa10.69□□□□□ -0.7
SV2B-206ENST00000557410 CAMSAP2Q08AD1 1489 aa10.69□□□□□ -0.7
SV2B-206ENST00000557410 MRS2Q9HD23 443 aa10.69□□□□□ -0.7
SV2B-206ENST00000557410 CNTLNQ9NXG0 1405 aa10.69□□□□□ -0.7
SV2B-206ENST00000557410 JPH4Q96JJ6 628 aa10.69□□□□□ -0.7
SV2B-206ENST00000557410 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
SV2B-206ENST00000557410 CCDC7Q96M83 1385 aa10.68□□□□□ -0.7
SV2B-206ENST00000557410 CEP170Q5SW79 1584 aa10.68□□□□□ -0.7
SV2B-206ENST00000557410 C11orf95C9JLR9 678 aaPredicted RBP10.68□□□□□ -0.7
SV2B-206ENST00000557410 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
SV2B-206ENST00000557410 ITSN2Q9NZM3 1697 aa10.67□□□□□ -0.7
SV2B-206ENST00000557410 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
SV2B-206ENST00000557410 GPATCH8Q9UKJ3 1502 aaKnown RBP10.67□□□□□ -0.7
SV2B-206ENST00000557410 NCOA1Q15788 1441 aa10.66□□□□□ -0.7
SV2B-206ENST00000557410 TEX14Q8IWB6 1497 aa10.66□□□□□ -0.7
SV2B-206ENST00000557410 KIF14Q15058 1648 aa10.65□□□□□ -0.7
SV2B-206ENST00000557410 SENP3-EIF4A1A0A087X0R7 540 aa10.65□□□□□ -0.7
SV2B-206ENST00000557410 ANKRD30AQ9BXX3 1397 aa10.65□□□□□ -0.7
SV2B-206ENST00000557410 PKD2Q13563 968 aa10.65□□□□□ -0.7
SV2B-206ENST00000557410 PRKRIP1Q9H875 184 aaPredicted RBP10.64□□□□□ -0.71
SV2B-206ENST00000557410 ADGBQ8N7X0 1667 aa10.64□□□□□ -0.71
SV2B-206ENST00000557410 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
SV2B-206ENST00000557410 PZPP20742 1482 aa10.64□□□□□ -0.71
SV2B-206ENST00000557410 CCDC184Q52MB2 194 aa10.63□□□□□ -0.71
SV2B-206ENST00000557410 KIF7Q2M1P5 1343 aa10.63□□□□□ -0.71
SV2B-206ENST00000557410 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
SV2B-206ENST00000557410 KIAA1107Q9UPP5 1409 aa10.62□□□□□ -0.71
SV2B-206ENST00000557410 ADCY10Q96PN6 1610 aa10.62□□□□□ -0.71
SV2B-206ENST00000557410 NUP160Q12769 1436 aa10.61□□□□□ -0.71
SV2B-206ENST00000557410 ANKRD50Q9ULJ7 1429 aa10.61□□□□□ -0.71
SV2B-206ENST00000557410 ADGRL2O95490 1459 aa10.61□□□□□ -0.71
SV2B-206ENST00000557410 ZBTB47Q9UFB7 747 aaPredicted RBP10.61□□□□□ -0.71
SV2B-206ENST00000557410 KDM2AQ9Y2K7 1162 aa10.61□□□□□ -0.71
SV2B-206ENST00000557410 NUP155O75694 1391 aa10.6□□□□□ -0.71
SV2B-206ENST00000557410 CROCC2H7BZ55 1655 aa10.6□□□□□ -0.71
SV2B-206ENST00000557410 SPATA31E1Q6ZUB1 1445 aa10.6□□□□□ -0.71
SV2B-206ENST00000557410 C9orf84Q5VXU9 1444 aa10.58□□□□□ -0.71
SV2B-206ENST00000557410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.58□□□□□ -0.71
SV2B-206ENST00000557410 USP47Q96K76 1375 aa10.58□□□□□ -0.72
SV2B-206ENST00000557410 ATP10BO94823 1461 aa10.58□□□□□ -0.72
SV2B-206ENST00000557410 HNRNPMP52272 730 aaKnown RBP eCLIP10.58□□□□□ -0.72
SV2B-206ENST00000557410 CDC42BPAQ5VT25 1732 aa10.57□□□□□ -0.72
SV2B-206ENST00000557410 CANXP27824 592 aaKnown RBP10.57□□□□□ -0.72
SV2B-206ENST00000557410 ABCA8O94911 1581 aa10.57□□□□□ -0.72
SV2B-206ENST00000557410 BCL11AQ9H165 835 aa10.56□□□□□ -0.72
SV2B-206ENST00000557410 POLR1AO95602 1720 aaPredicted RBP10.56□□□□□ -0.72
SV2B-206ENST00000557410 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
SV2B-206ENST00000557410 EIF5BO60841 1220 aaKnown RBP10.55□□□□□ -0.72
SV2B-206ENST00000557410 CARD11Q9BXL7 1154 aa10.55□□□□□ -0.72
SV2B-206ENST00000557410 ABCC10Q5T3U5 1492 aa10.55□□□□□ -0.72
SV2B-206ENST00000557410 PTPRGP23470 1445 aa10.55□□□□□ -0.72
SV2B-206ENST00000557410 MBD5Q9P267 1494 aa10.55□□□□□ -0.72
SV2B-206ENST00000557410 TRHP20396 242 aaPredicted RBP10.55□□□□□ -0.72
SV2B-206ENST00000557410 ZBED9Q6R2W3 1325 aa10.55□□□□□ -0.72
SV2B-206ENST00000557410 KIF15Q9NS87 1388 aa10.55□□□□□ -0.72
SV2B-206ENST00000557410 SHANK2Q9UPX8 1470 aa10.54□□□□□ -0.72
SV2B-206ENST00000557410 DCAF11Q8TEB1 546 aa10.53□□□□□ -0.72
SV2B-206ENST00000557410 STAG3Q9UJ98 1225 aa10.53□□□□□ -0.72
SV2B-206ENST00000557410 CHGAP10645 457 aaKnown RBP10.53□□□□□ -0.72
SV2B-206ENST00000557410 RGL3Q3MIN7 710 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms