RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
RDH11-209ENST00000557273 FER1L4A9Z1Z3 1794 aa16.87■□□□□ 0.29
RDH11-209ENST00000557273 SCAPERQ9BY12 1400 aa16.87■□□□□ 0.29
RDH11-209ENST00000557273 KIF14Q15058 1648 aa16.84■□□□□ 0.29
RDH11-209ENST00000557273 ARHGEF12Q9NZN5 1544 aa16.83■□□□□ 0.28
RDH11-209ENST00000557273 KDM5CP41229 1560 aa16.82■□□□□ 0.28
RDH11-209ENST00000557273 ATP10AO60312 1499 aa16.82■□□□□ 0.28
RDH11-209ENST00000557273 TROQ12816 1431 aaPredicted RBP16.82■□□□□ 0.28
RDH11-209ENST00000557273 C9orf84Q5VXU9 1444 aa16.82■□□□□ 0.28
RDH11-209ENST00000557273 CDK11AQ9UQ88 783 aaPredicted RBP16.82■□□□□ 0.28
RDH11-209ENST00000557273 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
RDH11-209ENST00000557273 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
RDH11-209ENST00000557273 ZNF518AQ6AHZ1 1483 aa16.8■□□□□ 0.28
RDH11-209ENST00000557273 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
RDH11-209ENST00000557273 REREQ9P2R6 1566 aa16.78■□□□□ 0.28
RDH11-209ENST00000557273 CLIP1P30622 1438 aa16.78■□□□□ 0.28
RDH11-209ENST00000557273 PREX1Q8TCU6 1659 aa16.77■□□□□ 0.28
RDH11-209ENST00000557273 CDC42BPBQ9Y5S2 1711 aa16.76■□□□□ 0.27
RDH11-209ENST00000557273 ARHGAP5Q13017 1502 aa16.75■□□□□ 0.27
RDH11-209ENST00000557273 SETD1BQ9UPS6 1966 aaKnown RBP16.75■□□□□ 0.27
RDH11-209ENST00000557273 HSPA2P54652 639 aa16.74■□□□□ 0.27
RDH11-209ENST00000557273 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
RDH11-209ENST00000557273 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
RDH11-209ENST00000557273 CCDC18Q5T9S5 1454 aa16.73■□□□□ 0.27
RDH11-209ENST00000557273 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
RDH11-209ENST00000557273 MLECQ14165 292 aa16.72■□□□□ 0.27
RDH11-209ENST00000557273 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
RDH11-209ENST00000557273 CASKIN1Q8WXD9 1431 aa16.71■□□□□ 0.27
RDH11-209ENST00000557273 ABCC1P33527 1531 aa16.71■□□□□ 0.27
RDH11-209ENST00000557273 AGLP35573 1532 aa16.7■□□□□ 0.26
RDH11-209ENST00000557273 ABCA6Q8N139 1617 aa16.7■□□□□ 0.26
RDH11-209ENST00000557273 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
RDH11-209ENST00000557273 AFAP1Q8N556 730 aa16.69■□□□□ 0.26
RDH11-209ENST00000557273 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
RDH11-209ENST00000557273 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
RDH11-209ENST00000557273 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
RDH11-209ENST00000557273 STRCQ7RTU9 1775 aa16.66■□□□□ 0.26
RDH11-209ENST00000557273 KIDINS220Q9ULH0 1771 aa16.65■□□□□ 0.26
RDH11-209ENST00000557273 FYCO1Q9BQS8 1478 aa16.65■□□□□ 0.26
RDH11-209ENST00000557273 C3P01024 1663 aa16.65■□□□□ 0.26
RDH11-209ENST00000557273 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.25
RDH11-209ENST00000557273 TRAPPC8Q9Y2L5 1435 aa16.64■□□□□ 0.25
RDH11-209ENST00000557273 CERKQ8TCT0 537 aa16.63■□□□□ 0.25
RDH11-209ENST00000557273 CEBPAP49715 358 aaPredicted RBP16.61■□□□□ 0.25
RDH11-209ENST00000557273 CNTLNQ9NXG0 1405 aa16.6■□□□□ 0.25
RDH11-209ENST00000557273 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
RDH11-209ENST00000557273 SAMD9LQ8IVG5 1584 aa16.59■□□□□ 0.25
RDH11-209ENST00000557273 MROH2AA6NES4 1674 aa16.59■□□□□ 0.25
RDH11-209ENST00000557273 MYT1LQ9UL68 1186 aa16.57■□□□□ 0.24
RDH11-209ENST00000557273 GPATCH8Q9UKJ3 1502 aaKnown RBP16.56■□□□□ 0.24
RDH11-209ENST00000557273 PTPRTO14522 1441 aa16.56■□□□□ 0.24
RDH11-209ENST00000557273 SYCP2Q9BX26 1530 aa16.55■□□□□ 0.24
RDH11-209ENST00000557273 KIAA1107Q9UPP5 1409 aa16.54■□□□□ 0.24
RDH11-209ENST00000557273 PLXNC1O60486 1568 aa16.54■□□□□ 0.24
RDH11-209ENST00000557273 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
RDH11-209ENST00000557273 NPATQ14207 1427 aa16.53■□□□□ 0.24
RDH11-209ENST00000557273 INO80Q9ULG1 1556 aaPredicted RBP16.53■□□□□ 0.24
RDH11-209ENST00000557273 ESF1Q9H501 851 aaKnown RBP16.52■□□□□ 0.24
RDH11-209ENST00000557273 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
RDH11-209ENST00000557273 NCOA1Q15788 1441 aa16.51■□□□□ 0.23
RDH11-209ENST00000557273 SUPT6HQ7KZ85 1726 aaKnown RBP16.49■□□□□ 0.23
RDH11-209ENST00000557273 LTBP4Q8N2S1 1624 aa16.48■□□□□ 0.23
RDH11-209ENST00000557273 IQSEC2Q5JU85 1478 aa16.48■□□□□ 0.23
RDH11-209ENST00000557273 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
RDH11-209ENST00000557273 ZNF142P52746 1687 aaPredicted RBP16.48■□□□□ 0.23
RDH11-209ENST00000557273 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
RDH11-209ENST00000557273 ZNF777Q9ULD5 760 aaPredicted RBP16.46■□□□□ 0.23
RDH11-209ENST00000557273 ZMYM3Q14202 1370 aa16.46■□□□□ 0.23
RDH11-209ENST00000557273 A2MP01023 1474 aa16.46■□□□□ 0.23
RDH11-209ENST00000557273 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
RDH11-209ENST00000557273 CLTCQ00610 1675 aaKnown RBP16.45■□□□□ 0.22
RDH11-209ENST00000557273 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
RDH11-209ENST00000557273 TIAM1Q13009 1591 aa16.44■□□□□ 0.22
RDH11-209ENST00000557273 HNRNPMP52272 730 aaKnown RBP eCLIP16.44■□□□□ 0.22
RDH11-209ENST00000557273 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
RDH11-209ENST00000557273 MYO3AQ8NEV4 1616 aa16.44■□□□□ 0.22
RDH11-209ENST00000557273 PLA2R1Q13018 1463 aa16.43■□□□□ 0.22
RDH11-209ENST00000557273 MTUS2Q5JR59 1369 aa16.43■□□□□ 0.22
RDH11-209ENST00000557273 EHBP1L1Q8N3D4 1523 aa16.43■□□□□ 0.22
RDH11-209ENST00000557273 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
RDH11-209ENST00000557273 MBD5Q9P267 1494 aa16.42■□□□□ 0.22
RDH11-209ENST00000557273 PTPRKQ15262 1439 aa16.41■□□□□ 0.22
RDH11-209ENST00000557273 CEP170BQ9Y4F5 1589 aaPredicted RBP16.4■□□□□ 0.22
RDH11-209ENST00000557273 RTEL1-TNFRSF6BF6WH68 1400 aa16.4■□□□□ 0.22
RDH11-209ENST00000557273 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
RDH11-209ENST00000557273 TCOF1Q13428 1488 aaKnown RBP16.38■□□□□ 0.21
RDH11-209ENST00000557273 FAM135AQ9P2D6 1515 aa16.38■□□□□ 0.21
RDH11-209ENST00000557273 PKD2Q13563 968 aa16.35■□□□□ 0.21
RDH11-209ENST00000557273 GGT6Q6P531 493 aa16.33■□□□□ 0.2
RDH11-209ENST00000557273 ZNF644Q9H582 1327 aaPredicted RBP16.33■□□□□ 0.2
RDH11-209ENST00000557273 DHX29Q7Z478 1369 aaKnown RBP16.33■□□□□ 0.2
RDH11-209ENST00000557273 A2ML1A8K2U0 1454 aa16.32■□□□□ 0.2
RDH11-209ENST00000557273 CCDC141Q6ZP82 1450 aa16.32■□□□□ 0.2
RDH11-209ENST00000557273 DNMT1P26358 1616 aaKnown RBP16.31■□□□□ 0.2
RDH11-209ENST00000557273 SPATA31D1Q6ZQQ2 1576 aa16.31■□□□□ 0.2
RDH11-209ENST00000557273 DISP3Q9P2K9 1392 aa16.31■□□□□ 0.2
RDH11-209ENST00000557273 NCKAP5LQ9HCH0 1330 aa16.31■□□□□ 0.2
RDH11-209ENST00000557273 RSPH4AQ5TD94 716 aa16.3■□□□□ 0.2
RDH11-209ENST00000557273 KDM5DQ9BY66 1539 aa16.29■□□□□ 0.2
RDH11-209ENST00000557273 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms