RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZFYVE16Q7Z3T8 1539 aa25.86■■□□□ 1.73
TUBB3-213ENST00000557262 POGZQ7Z3K3 1410 aa25.86■■□□□ 1.73
TUBB3-213ENST00000557262 CASKIN1Q8WXD9 1431 aa25.86■■□□□ 1.73
TUBB3-213ENST00000557262 MYO5CQ9NQX4 1742 aa25.85■■□□□ 1.73
TUBB3-213ENST00000557262 KIF14Q15058 1648 aa25.85■■□□□ 1.73
TUBB3-213ENST00000557262 ILDR1Q86SU0 546 aaPredicted RBP25.84■■□□□ 1.73
TUBB3-213ENST00000557262 LRRIQ1Q96JM4 1722 aa25.82■■□□□ 1.72
TUBB3-213ENST00000557262 CCDC18Q5T9S5 1454 aa25.8■■□□□ 1.72
TUBB3-213ENST00000557262 ARHGAP5Q13017 1502 aa25.79■■□□□ 1.72
TUBB3-213ENST00000557262 MLECQ14165 292 aa25.78■■□□□ 1.72
TUBB3-213ENST00000557262 AFAP1Q8N556 730 aa25.78■■□□□ 1.72
TUBB3-213ENST00000557262 ATP10AO60312 1499 aa25.78■■□□□ 1.72
TUBB3-213ENST00000557262 RIMS1Q86UR5 1692 aaKnown RBP25.77■■□□□ 1.72
TUBB3-213ENST00000557262 PCF11O94913 1555 aaKnown RBP25.77■■□□□ 1.72
TUBB3-213ENST00000557262 SIGLEC1Q9BZZ2 1709 aa25.77■■□□□ 1.72
TUBB3-213ENST00000557262 ZNF518AQ6AHZ1 1483 aa25.74■■□□□ 1.71
TUBB3-213ENST00000557262 MYT1LQ9UL68 1186 aa25.73■■□□□ 1.71
TUBB3-213ENST00000557262 PLPPR3Q6T4P5 718 aa25.72■■□□□ 1.71
TUBB3-213ENST00000557262 FYCO1Q9BQS8 1478 aa25.72■■□□□ 1.71
TUBB3-213ENST00000557262 C9orf84Q5VXU9 1444 aa25.71■■□□□ 1.71
TUBB3-213ENST00000557262 CDC42BPBQ9Y5S2 1711 aa25.69■■□□□ 1.7
TUBB3-213ENST00000557262 LMTK3Q96Q04 1460 aa25.68■■□□□ 1.7
TUBB3-213ENST00000557262 KDM5CP41229 1560 aa25.66■■□□□ 1.7
TUBB3-213ENST00000557262 PREX2Q70Z35 1606 aa25.64■■□□□ 1.7
TUBB3-213ENST00000557262 FER1L4A9Z1Z3 1794 aa25.64■■□□□ 1.69
TUBB3-213ENST00000557262 MLH3Q9UHC1 1453 aa25.63■■□□□ 1.69
TUBB3-213ENST00000557262 TRAPPC8Q9Y2L5 1435 aa25.63■■□□□ 1.69
TUBB3-213ENST00000557262 ARHGEF12Q9NZN5 1544 aa25.62■■□□□ 1.69
TUBB3-213ENST00000557262 ZNF777Q9ULD5 760 aaPredicted RBP25.61■■□□□ 1.69
TUBB3-213ENST00000557262 HSPA2P54652 639 aa25.59■■□□□ 1.69
TUBB3-213ENST00000557262 ABCC1P33527 1531 aa25.58■■□□□ 1.69
TUBB3-213ENST00000557262 GPATCH8Q9UKJ3 1502 aaKnown RBP25.57■■□□□ 1.68
TUBB3-213ENST00000557262 CDC42BPAQ5VT25 1732 aa25.57■■□□□ 1.68
TUBB3-213ENST00000557262 DIP2CQ9Y2E4 1556 aa25.56■■□□□ 1.68
TUBB3-213ENST00000557262 CEBPAP49715 358 aaPredicted RBP25.56■■□□□ 1.68
TUBB3-213ENST00000557262 ITSN2Q9NZM3 1697 aa25.55■■□□□ 1.68
TUBB3-213ENST00000557262 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
TUBB3-213ENST00000557262 REREQ9P2R6 1566 aa25.53■■□□□ 1.68
TUBB3-213ENST00000557262 HNRNPMP52272 730 aaKnown RBP eCLIP25.53■■□□□ 1.68
TUBB3-213ENST00000557262 MTUS2Q5JR59 1369 aa25.53■■□□□ 1.68
TUBB3-213ENST00000557262 ABCA6Q8N139 1617 aa25.52■■□□□ 1.68
TUBB3-213ENST00000557262 CCNB3Q8WWL7 1395 aa25.52■■□□□ 1.68
TUBB3-213ENST00000557262 AGLP35573 1532 aa25.49■■□□□ 1.67
TUBB3-213ENST00000557262 ESF1Q9H501 851 aaKnown RBP25.49■■□□□ 1.67
TUBB3-213ENST00000557262 SPAG9O60271 1321 aaKnown RBP25.48■■□□□ 1.67
TUBB3-213ENST00000557262 FBXO41Q8TF61 875 aa25.48■■□□□ 1.67
TUBB3-213ENST00000557262 SAMD9LQ8IVG5 1584 aa25.48■■□□□ 1.67
TUBB3-213ENST00000557262 KIAA1107Q9UPP5 1409 aa25.47■■□□□ 1.67
TUBB3-213ENST00000557262 KIDINS220Q9ULH0 1771 aa25.47■■□□□ 1.67
TUBB3-213ENST00000557262 CEP162Q5TB80 1403 aa25.46■■□□□ 1.67
TUBB3-213ENST00000557262 PLEKHH2Q8IVE3 1493 aa25.45■■□□□ 1.66
TUBB3-213ENST00000557262 SYCP2Q9BX26 1530 aa25.44■■□□□ 1.66
TUBB3-213ENST00000557262 PREX1Q8TCU6 1659 aa25.42■■□□□ 1.66
TUBB3-213ENST00000557262 SETD1BQ9UPS6 1966 aaKnown RBP25.4■■□□□ 1.66
TUBB3-213ENST00000557262 ZNF644Q9H582 1327 aaPredicted RBP25.37■■□□□ 1.65
TUBB3-213ENST00000557262 EHBP1L1Q8N3D4 1523 aa25.37■■□□□ 1.65
TUBB3-213ENST00000557262 UHRF1BP1Q6BDS2 1440 aa25.37■■□□□ 1.65
TUBB3-213ENST00000557262 CNTLNQ9NXG0 1405 aa25.37■■□□□ 1.65
TUBB3-213ENST00000557262 LOC105371045A0A1W2PR82 267 aa25.35■■□□□ 1.65
TUBB3-213ENST00000557262 ATP7AQ04656 1500 aa25.34■■□□□ 1.65
TUBB3-213ENST00000557262 C3P01024 1663 aa25.34■■□□□ 1.65
TUBB3-213ENST00000557262 DMRT2Q9Y5R5 561 aa25.34■■□□□ 1.65
TUBB3-213ENST00000557262 TIAM1Q13009 1591 aa25.32■■□□□ 1.64
TUBB3-213ENST00000557262 A2MP01023 1474 aa25.3■■□□□ 1.64
TUBB3-213ENST00000557262 MBD5Q9P267 1494 aa25.29■■□□□ 1.64
TUBB3-213ENST00000557262 INO80Q9ULG1 1556 aaPredicted RBP25.29■■□□□ 1.64
TUBB3-213ENST00000557262 ZMYM3Q14202 1370 aa25.29■■□□□ 1.64
TUBB3-213ENST00000557262 CERKQ8TCT0 537 aa25.28■■□□□ 1.64
TUBB3-213ENST00000557262 SUPT6HQ7KZ85 1726 aaKnown RBP25.28■■□□□ 1.64
TUBB3-213ENST00000557262 GGT6Q6P531 493 aa25.27■■□□□ 1.64
TUBB3-213ENST00000557262 RSPH4AQ5TD94 716 aa25.26■■□□□ 1.63
TUBB3-213ENST00000557262 PPP6R1Q9UPN7 881 aa25.26■■□□□ 1.63
TUBB3-213ENST00000557262 RTEL1-TNFRSF6BF6WH68 1400 aa25.25■■□□□ 1.63
TUBB3-213ENST00000557262 NCOA2Q15596 1464 aa25.25■■□□□ 1.63
TUBB3-213ENST00000557262 STRCQ7RTU9 1775 aa25.24■■□□□ 1.63
TUBB3-213ENST00000557262 PLXNC1O60486 1568 aa25.24■■□□□ 1.63
TUBB3-213ENST00000557262 NPATQ14207 1427 aa25.22■■□□□ 1.63
TUBB3-213ENST00000557262 MROH2AA6NES4 1674 aa25.21■■□□□ 1.63
TUBB3-213ENST00000557262 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.63
TUBB3-213ENST00000557262 DHX29Q7Z478 1369 aaKnown RBP25.19■■□□□ 1.62
TUBB3-213ENST00000557262 ADGBQ8N7X0 1667 aa25.19■■□□□ 1.62
TUBB3-213ENST00000557262 PTPRTO14522 1441 aa25.16■■□□□ 1.62
TUBB3-213ENST00000557262 CAMSAP2Q08AD1 1489 aa25.15■■□□□ 1.62
TUBB3-213ENST00000557262 CCDC141Q6ZP82 1450 aa25.15■■□□□ 1.62
TUBB3-213ENST00000557262 CLTCQ00610 1675 aaKnown RBP25.15■■□□□ 1.62
TUBB3-213ENST00000557262 LRRC9Q6ZRR7 1453 aa25.15■■□□□ 1.62
TUBB3-213ENST00000557262 TSPY4P0CV99 314 aa25.14■■□□□ 1.62
TUBB3-213ENST00000557262 TSPY10P0CW01 314 aa25.14■■□□□ 1.62
TUBB3-213ENST00000557262 KIF3BO15066 747 aa25.13■■□□□ 1.61
TUBB3-213ENST00000557262 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
TUBB3-213ENST00000557262 PTPRKQ15262 1439 aa25.12■■□□□ 1.61
TUBB3-213ENST00000557262 NCOA1Q15788 1441 aa25.11■■□□□ 1.61
TUBB3-213ENST00000557262 MAP3K1Q13233 1512 aa25.09■■□□□ 1.61
TUBB3-213ENST00000557262 ARHGEF5Q12774 1597 aa25.06■■□□□ 1.6
TUBB3-213ENST00000557262 CAMSAP1Q5T5Y3 1602 aa25.06■■□□□ 1.6
TUBB3-213ENST00000557262 NCKAP5LQ9HCH0 1330 aa25.05■■□□□ 1.6
TUBB3-213ENST00000557262 WASHC2CQ9Y4E1 1318 aa25.04■■□□□ 1.6
TUBB3-213ENST00000557262 PKD2Q13563 968 aa25.03■■□□□ 1.6
TUBB3-213ENST00000557262 MYO3AQ8NEV4 1616 aa25.03■■□□□ 1.6
TUBB3-213ENST00000557262 MIA2Q96PC5 1412 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms