RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZFYVE16Q7Z3T8 1539 aa25.86■■□□□ 1.73
TUBB3-213ENST00000557262 POGZQ7Z3K3 1410 aa25.86■■□□□ 1.73
TUBB3-213ENST00000557262 CASKIN1Q8WXD9 1431 aa25.86■■□□□ 1.73
TUBB3-213ENST00000557262 MYO5CQ9NQX4 1742 aa25.85■■□□□ 1.73
TUBB3-213ENST00000557262 KIF14Q15058 1648 aa25.85■■□□□ 1.73
TUBB3-213ENST00000557262 ILDR1Q86SU0 546 aaPredicted RBP25.84■■□□□ 1.73
TUBB3-213ENST00000557262 LRRIQ1Q96JM4 1722 aa25.82■■□□□ 1.72
TUBB3-213ENST00000557262 CCDC18Q5T9S5 1454 aa25.8■■□□□ 1.72
TUBB3-213ENST00000557262 ARHGAP5Q13017 1502 aa25.79■■□□□ 1.72
TUBB3-213ENST00000557262 MLECQ14165 292 aa25.78■■□□□ 1.72
TUBB3-213ENST00000557262 AFAP1Q8N556 730 aa25.78■■□□□ 1.72
TUBB3-213ENST00000557262 ATP10AO60312 1499 aa25.78■■□□□ 1.72
TUBB3-213ENST00000557262 RIMS1Q86UR5 1692 aaKnown RBP25.77■■□□□ 1.72
TUBB3-213ENST00000557262 PCF11O94913 1555 aaKnown RBP25.77■■□□□ 1.72
TUBB3-213ENST00000557262 SIGLEC1Q9BZZ2 1709 aa25.77■■□□□ 1.72
TUBB3-213ENST00000557262 ZNF518AQ6AHZ1 1483 aa25.74■■□□□ 1.71
TUBB3-213ENST00000557262 MYT1LQ9UL68 1186 aa25.73■■□□□ 1.71
TUBB3-213ENST00000557262 PLPPR3Q6T4P5 718 aa25.72■■□□□ 1.71
TUBB3-213ENST00000557262 FYCO1Q9BQS8 1478 aa25.72■■□□□ 1.71
TUBB3-213ENST00000557262 C9orf84Q5VXU9 1444 aa25.71■■□□□ 1.71
TUBB3-213ENST00000557262 CDC42BPBQ9Y5S2 1711 aa25.69■■□□□ 1.7
TUBB3-213ENST00000557262 LMTK3Q96Q04 1460 aa25.68■■□□□ 1.7
TUBB3-213ENST00000557262 KDM5CP41229 1560 aa25.66■■□□□ 1.7
TUBB3-213ENST00000557262 PREX2Q70Z35 1606 aa25.64■■□□□ 1.7
TUBB3-213ENST00000557262 FER1L4A9Z1Z3 1794 aa25.64■■□□□ 1.69
TUBB3-213ENST00000557262 MLH3Q9UHC1 1453 aa25.63■■□□□ 1.69
TUBB3-213ENST00000557262 TRAPPC8Q9Y2L5 1435 aa25.63■■□□□ 1.69
TUBB3-213ENST00000557262 ARHGEF12Q9NZN5 1544 aa25.62■■□□□ 1.69
TUBB3-213ENST00000557262 ZNF777Q9ULD5 760 aaPredicted RBP25.61■■□□□ 1.69
TUBB3-213ENST00000557262 HSPA2P54652 639 aa25.59■■□□□ 1.69
TUBB3-213ENST00000557262 ABCC1P33527 1531 aa25.58■■□□□ 1.69
TUBB3-213ENST00000557262 GPATCH8Q9UKJ3 1502 aaKnown RBP25.57■■□□□ 1.68
TUBB3-213ENST00000557262 CDC42BPAQ5VT25 1732 aa25.57■■□□□ 1.68
TUBB3-213ENST00000557262 DIP2CQ9Y2E4 1556 aa25.56■■□□□ 1.68
TUBB3-213ENST00000557262 CEBPAP49715 358 aaPredicted RBP25.56■■□□□ 1.68
TUBB3-213ENST00000557262 ITSN2Q9NZM3 1697 aa25.55■■□□□ 1.68
TUBB3-213ENST00000557262 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
TUBB3-213ENST00000557262 REREQ9P2R6 1566 aa25.53■■□□□ 1.68
TUBB3-213ENST00000557262 HNRNPMP52272 730 aaKnown RBP eCLIP25.53■■□□□ 1.68
TUBB3-213ENST00000557262 MTUS2Q5JR59 1369 aa25.53■■□□□ 1.68
TUBB3-213ENST00000557262 ABCA6Q8N139 1617 aa25.52■■□□□ 1.68
TUBB3-213ENST00000557262 CCNB3Q8WWL7 1395 aa25.52■■□□□ 1.68
TUBB3-213ENST00000557262 AGLP35573 1532 aa25.49■■□□□ 1.67
TUBB3-213ENST00000557262 ESF1Q9H501 851 aaKnown RBP25.49■■□□□ 1.67
TUBB3-213ENST00000557262 SPAG9O60271 1321 aaKnown RBP25.48■■□□□ 1.67
TUBB3-213ENST00000557262 FBXO41Q8TF61 875 aa25.48■■□□□ 1.67
TUBB3-213ENST00000557262 SAMD9LQ8IVG5 1584 aa25.48■■□□□ 1.67
TUBB3-213ENST00000557262 KIAA1107Q9UPP5 1409 aa25.47■■□□□ 1.67
TUBB3-213ENST00000557262 KIDINS220Q9ULH0 1771 aa25.47■■□□□ 1.67
TUBB3-213ENST00000557262 CEP162Q5TB80 1403 aa25.46■■□□□ 1.67
TUBB3-213ENST00000557262 PLEKHH2Q8IVE3 1493 aa25.45■■□□□ 1.66
TUBB3-213ENST00000557262 SYCP2Q9BX26 1530 aa25.44■■□□□ 1.66
TUBB3-213ENST00000557262 PREX1Q8TCU6 1659 aa25.42■■□□□ 1.66
TUBB3-213ENST00000557262 SETD1BQ9UPS6 1966 aaKnown RBP25.4■■□□□ 1.66
TUBB3-213ENST00000557262 ZNF644Q9H582 1327 aaPredicted RBP25.37■■□□□ 1.65
TUBB3-213ENST00000557262 EHBP1L1Q8N3D4 1523 aa25.37■■□□□ 1.65
TUBB3-213ENST00000557262 UHRF1BP1Q6BDS2 1440 aa25.37■■□□□ 1.65
TUBB3-213ENST00000557262 CNTLNQ9NXG0 1405 aa25.37■■□□□ 1.65
TUBB3-213ENST00000557262 LOC105371045A0A1W2PR82 267 aa25.35■■□□□ 1.65
TUBB3-213ENST00000557262 ATP7AQ04656 1500 aa25.34■■□□□ 1.65
TUBB3-213ENST00000557262 C3P01024 1663 aa25.34■■□□□ 1.65
TUBB3-213ENST00000557262 DMRT2Q9Y5R5 561 aa25.34■■□□□ 1.65
TUBB3-213ENST00000557262 TIAM1Q13009 1591 aa25.32■■□□□ 1.64
TUBB3-213ENST00000557262 A2MP01023 1474 aa25.3■■□□□ 1.64
TUBB3-213ENST00000557262 MBD5Q9P267 1494 aa25.29■■□□□ 1.64
TUBB3-213ENST00000557262 INO80Q9ULG1 1556 aaPredicted RBP25.29■■□□□ 1.64
TUBB3-213ENST00000557262 ZMYM3Q14202 1370 aa25.29■■□□□ 1.64
TUBB3-213ENST00000557262 CERKQ8TCT0 537 aa25.28■■□□□ 1.64
TUBB3-213ENST00000557262 SUPT6HQ7KZ85 1726 aaKnown RBP25.28■■□□□ 1.64
TUBB3-213ENST00000557262 GGT6Q6P531 493 aa25.27■■□□□ 1.64
TUBB3-213ENST00000557262 RSPH4AQ5TD94 716 aa25.26■■□□□ 1.63
TUBB3-213ENST00000557262 PPP6R1Q9UPN7 881 aa25.26■■□□□ 1.63
TUBB3-213ENST00000557262 RTEL1-TNFRSF6BF6WH68 1400 aa25.25■■□□□ 1.63
TUBB3-213ENST00000557262 NCOA2Q15596 1464 aa25.25■■□□□ 1.63
TUBB3-213ENST00000557262 STRCQ7RTU9 1775 aa25.24■■□□□ 1.63
TUBB3-213ENST00000557262 PLXNC1O60486 1568 aa25.24■■□□□ 1.63
TUBB3-213ENST00000557262 NPATQ14207 1427 aa25.22■■□□□ 1.63
TUBB3-213ENST00000557262 MROH2AA6NES4 1674 aa25.21■■□□□ 1.63
TUBB3-213ENST00000557262 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.63
TUBB3-213ENST00000557262 DHX29Q7Z478 1369 aaKnown RBP25.19■■□□□ 1.62
TUBB3-213ENST00000557262 ADGBQ8N7X0 1667 aa25.19■■□□□ 1.62
TUBB3-213ENST00000557262 PTPRTO14522 1441 aa25.16■■□□□ 1.62
TUBB3-213ENST00000557262 CAMSAP2Q08AD1 1489 aa25.15■■□□□ 1.62
TUBB3-213ENST00000557262 CCDC141Q6ZP82 1450 aa25.15■■□□□ 1.62
TUBB3-213ENST00000557262 CLTCQ00610 1675 aaKnown RBP25.15■■□□□ 1.62
TUBB3-213ENST00000557262 LRRC9Q6ZRR7 1453 aa25.15■■□□□ 1.62
TUBB3-213ENST00000557262 TSPY4P0CV99 314 aa25.14■■□□□ 1.62
TUBB3-213ENST00000557262 TSPY10P0CW01 314 aa25.14■■□□□ 1.62
TUBB3-213ENST00000557262 KIF3BO15066 747 aa25.13■■□□□ 1.61
TUBB3-213ENST00000557262 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
TUBB3-213ENST00000557262 PTPRKQ15262 1439 aa25.12■■□□□ 1.61
TUBB3-213ENST00000557262 NCOA1Q15788 1441 aa25.11■■□□□ 1.61
TUBB3-213ENST00000557262 MAP3K1Q13233 1512 aa25.09■■□□□ 1.61
TUBB3-213ENST00000557262 ARHGEF5Q12774 1597 aa25.06■■□□□ 1.6
TUBB3-213ENST00000557262 CAMSAP1Q5T5Y3 1602 aa25.06■■□□□ 1.6
TUBB3-213ENST00000557262 NCKAP5LQ9HCH0 1330 aa25.05■■□□□ 1.6
TUBB3-213ENST00000557262 WASHC2CQ9Y4E1 1318 aa25.04■■□□□ 1.6
TUBB3-213ENST00000557262 PKD2Q13563 968 aa25.03■■□□□ 1.6
TUBB3-213ENST00000557262 MYO3AQ8NEV4 1616 aa25.03■■□□□ 1.6
TUBB3-213ENST00000557262 MIA2Q96PC5 1412 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms