RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-223ENST00000556772 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
NUMB-223ENST00000556772 PRKRIP1Q9H875 184 aaPredicted RBP10.38□□□□□ -0.75
NUMB-223ENST00000556772 DNTTIP2Q5QJE6 756 aaKnown RBP10.38□□□□□ -0.75
NUMB-223ENST00000556772 HSCBQ8IWL3 235 aa10.37□□□□□ -0.75
NUMB-223ENST00000556772 MAPK8IP3Q9UPT6 1336 aa10.37□□□□□ -0.75
NUMB-223ENST00000556772 CADPSQ9ULU8 1353 aa10.37□□□□□ -0.75
NUMB-223ENST00000556772 SLKQ9H2G2 1235 aaPredicted RBP10.37□□□□□ -0.75
NUMB-223ENST00000556772 SMARCA2P51531 1590 aa10.37□□□□□ -0.75
NUMB-223ENST00000556772 MS4A1P11836 297 aa10.37□□□□□ -0.75
NUMB-223ENST00000556772 ZBED9Q6R2W3 1325 aa10.37□□□□□ -0.75
NUMB-223ENST00000556772 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
NUMB-223ENST00000556772 MLECQ14165 292 aa10.36□□□□□ -0.75
NUMB-223ENST00000556772 CASC1Q6TDU7 716 aa10.36□□□□□ -0.75
NUMB-223ENST00000556772 USP35Q9P2H5 1018 aa10.36□□□□□ -0.75
NUMB-223ENST00000556772 EIF4G1Q04637 1599 aaKnown RBP10.36□□□□□ -0.75
NUMB-223ENST00000556772 PDE3BQ13370 1112 aa10.35□□□□□ -0.75
NUMB-223ENST00000556772 PDE4AP27815 886 aa10.34□□□□□ -0.75
NUMB-223ENST00000556772 FHOD3Q2V2M9 1422 aa10.34□□□□□ -0.75
NUMB-223ENST00000556772 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
NUMB-223ENST00000556772 NLRP13Q86W25 1043 aa10.34□□□□□ -0.75
NUMB-223ENST00000556772 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
NUMB-223ENST00000556772 ROCK2O75116 1388 aaKnown RBP10.33□□□□□ -0.76
NUMB-223ENST00000556772 C14orf37Q86TY3 774 aa10.33□□□□□ -0.76
NUMB-223ENST00000556772 U2SURPO15042 1029 aaKnown RBP10.33□□□□□ -0.76
NUMB-223ENST00000556772 PNNQ9H307 717 aaKnown RBP10.32□□□□□ -0.76
NUMB-223ENST00000556772 EXOC6Q8TAG9 804 aa10.32□□□□□ -0.76
NUMB-223ENST00000556772 CHMP4BQ9H444 224 aaKnown RBP10.32□□□□□ -0.76
NUMB-223ENST00000556772 NUP155O75694 1391 aa10.31□□□□□ -0.76
NUMB-223ENST00000556772 MSNP26038 577 aaKnown RBP10.3□□□□□ -0.76
NUMB-223ENST00000556772 RRP1P56182 461 aaKnown RBP10.3□□□□□ -0.76
NUMB-223ENST00000556772 GOLGA2Q08379 1002 aa10.3□□□□□ -0.76
NUMB-223ENST00000556772 MORC1Q86VD1 984 aa10.3□□□□□ -0.76
NUMB-223ENST00000556772 SLC4A3P48751 1232 aa10.3□□□□□ -0.76
NUMB-223ENST00000556772 PLCB2Q00722 1185 aa10.29□□□□□ -0.76
NUMB-223ENST00000556772 GSE1Q14687 1217 aa10.29□□□□□ -0.76
NUMB-223ENST00000556772 MYBBP1AQ9BQG0 1328 aaKnown RBP10.29□□□□□ -0.76
NUMB-223ENST00000556772 PLIN1O60240 522 aa10.28□□□□□ -0.76
NUMB-223ENST00000556772 RWDD1Q9H446 243 aaPredicted RBP10.28□□□□□ -0.76
NUMB-223ENST00000556772 KIF15Q9NS87 1388 aa10.28□□□□□ -0.76
NUMB-223ENST00000556772 GOLGA6L3A6NEY3 463 aa10.28□□□□□ -0.76
NUMB-223ENST00000556772 CCDC18Q5T9S5 1454 aa10.28□□□□□ -0.76
NUMB-223ENST00000556772 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.76
NUMB-223ENST00000556772 GBP4Q96PP9 640 aa10.27□□□□□ -0.77
NUMB-223ENST00000556772 ST20-MTHFSA0A0A6YYL1 179 aa10.27□□□□□ -0.77
NUMB-223ENST00000556772 KIF21BO75037 1637 aa10.26□□□□□ -0.77
NUMB-223ENST00000556772 ANKRD30AQ9BXX3 1397 aa10.26□□□□□ -0.77
NUMB-223ENST00000556772 FAM161AQ3B820 660 aa10.26□□□□□ -0.77
NUMB-223ENST00000556772 PMFBP1Q8TBY8 1022 aa10.26□□□□□ -0.77
NUMB-223ENST00000556772 CENPQQ7L2Z9 268 aaPredicted RBP10.26□□□□□ -0.77
NUMB-223ENST00000556772 SMARCA4P51532 1647 aa10.25□□□□□ -0.77
NUMB-223ENST00000556772 MFAP1P55081 439 aaKnown RBP10.25□□□□□ -0.77
NUMB-223ENST00000556772 CCDC146Q8IYE0 955 aa10.25□□□□□ -0.77
NUMB-223ENST00000556772 CRBNQ96SW2 442 aa10.25□□□□□ -0.77
NUMB-223ENST00000556772 POGKQ9P215 609 aa10.24□□□□□ -0.77
NUMB-223ENST00000556772 PHLDB1Q86UU1 1377 aa10.24□□□□□ -0.77
NUMB-223ENST00000556772 ITPRIPQ8IWB1 547 aa10.23□□□□□ -0.77
NUMB-223ENST00000556772 IPO8O15397 1037 aaKnown RBP10.23□□□□□ -0.77
NUMB-223ENST00000556772 CLUAP1Q96AJ1 413 aa10.23□□□□□ -0.77
NUMB-223ENST00000556772 USP47Q96K76 1375 aa10.23□□□□□ -0.77
NUMB-223ENST00000556772 U2AF1L5P0DN76 240 aaPredicted RBP10.22□□□□□ -0.77
NUMB-223ENST00000556772 PTMSP20962 102 aa10.22□□□□□ -0.77
NUMB-223ENST00000556772 U2AF1Q01081 240 aaKnown RBP eCLIP10.22□□□□□ -0.77
NUMB-223ENST00000556772 CCDC7Q96M83 1385 aa10.22□□□□□ -0.77
NUMB-223ENST00000556772 CENPJQ9HC77 1338 aaPredicted RBP10.22□□□□□ -0.77
NUMB-223ENST00000556772 ZRSR1Q15695 479 aaKnown RBP10.22□□□□□ -0.77
NUMB-223ENST00000556772 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
NUMB-223ENST00000556772 WASHC2AQ641Q2 1341 aa10.22□□□□□ -0.77
NUMB-223ENST00000556772 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
NUMB-223ENST00000556772 RSPH6AQ9H0K4 717 aa10.22□□□□□ -0.77
NUMB-223ENST00000556772 PANK3Q9H999 370 aa10.21□□□□□ -0.78
NUMB-223ENST00000556772 KIF7Q2M1P5 1343 aa10.21□□□□□ -0.78
NUMB-223ENST00000556772 CNTLNQ9NXG0 1405 aa10.21□□□□□ -0.78
NUMB-223ENST00000556772 CFAP44Q96MT7 982 aa10.2□□□□□ -0.78
NUMB-223ENST00000556772 FAM69CQ0P6D2 419 aa10.2□□□□□ -0.78
NUMB-223ENST00000556772 CARMIL2Q6F5E8 1435 aa10.2□□□□□ -0.78
NUMB-223ENST00000556772 SRPK2P78362 688 aaKnown RBP10.2□□□□□ -0.78
NUMB-223ENST00000556772 UACAQ9BZF9 1416 aa10.19□□□□□ -0.78
NUMB-223ENST00000556772 RRBP1Q9P2E9 1410 aaKnown RBP10.19□□□□□ -0.78
NUMB-223ENST00000556772 KANK1Q14678 1352 aa10.19□□□□□ -0.78
NUMB-223ENST00000556772 ZBTB7CA1YPR0 619 aa10.19□□□□□ -0.78
NUMB-223ENST00000556772 CHAF1AQ13111 956 aaPredicted RBP10.19□□□□□ -0.78
NUMB-223ENST00000556772 SAFB2Q14151 953 aaKnown RBP eCLIP10.19□□□□□ -0.78
NUMB-223ENST00000556772 SMC4Q9NTJ3 1288 aa10.19□□□□□ -0.78
NUMB-223ENST00000556772 FANCD2Q9BXW9 1451 aa10.19□□□□□ -0.78
NUMB-223ENST00000556772 APBB1O00213 710 aa10.18□□□□□ -0.78
NUMB-223ENST00000556772 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
NUMB-223ENST00000556772 MCCP23508 829 aa10.18□□□□□ -0.78
NUMB-223ENST00000556772 HAP1P54257 671 aaPredicted RBP10.18□□□□□ -0.78
NUMB-223ENST00000556772 HNRNPMP52272 730 aaKnown RBP eCLIP10.17□□□□□ -0.78
NUMB-223ENST00000556772 ARID3AQ99856 593 aa10.17□□□□□ -0.78
NUMB-223ENST00000556772 FGD6Q6ZV73 1430 aa10.17□□□□□ -0.78
NUMB-223ENST00000556772 LRRC9Q6ZRR7 1453 aa10.17□□□□□ -0.78
NUMB-223ENST00000556772 A0A0G2JS52 829 aa10.17□□□□□ -0.78
NUMB-223ENST00000556772 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
NUMB-223ENST00000556772 CC2D2AQ9P2K1 1620 aa10.17□□□□□ -0.78
NUMB-223ENST00000556772 IGF1RP08069 1367 aa10.16□□□□□ -0.78
NUMB-223ENST00000556772 HSP90AA2PQ14568 343 aaPredicted RBP10.16□□□□□ -0.78
NUMB-223ENST00000556772 NFKBIBQ15653 356 aa10.16□□□□□ -0.78
NUMB-223ENST00000556772 GOLGA6L4A6NEF3 574 aa10.16□□□□□ -0.78
NUMB-223ENST00000556772 KCNJ4P48050 445 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms