RNA–Protein interactions for RNA: ENST00000556555.1

NDUFB1-205, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 3

Gene NDUFB1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-205ENST00000556555 RAPGEF3O95398 923 aa34.74■■■■□ 3.15
NDUFB1-205ENST00000556555 CDC42BPBQ9Y5S2 1711 aa34.73■■■■□ 3.15
NDUFB1-205ENST00000556555 CCNB3Q8WWL7 1395 aa34.72■■■■□ 3.15
NDUFB1-205ENST00000556555 SCAPERQ9BY12 1400 aa34.72■■■■□ 3.15
NDUFB1-205ENST00000556555 FRMPD1Q5SYB0 1578 aa34.71■■■■□ 3.15
NDUFB1-205ENST00000556555 CDC42BPAQ5VT25 1732 aa34.71■■■■□ 3.15
NDUFB1-205ENST00000556555 GPATCH8Q9UKJ3 1502 aaKnown RBP34.71■■■■□ 3.15
NDUFB1-205ENST00000556555 LRRC9Q6ZRR7 1453 aa34.69■■■■□ 3.14
NDUFB1-205ENST00000556555 RICTORQ6R327 1708 aa34.69■■■■□ 3.14
NDUFB1-205ENST00000556555 POGZQ7Z3K3 1410 aa34.67■■■■□ 3.14
NDUFB1-205ENST00000556555 APLP2Q06481 763 aa34.67■■■■□ 3.14
NDUFB1-205ENST00000556555 SUPT6HQ7KZ85 1726 aaKnown RBP34.67■■■■□ 3.14
NDUFB1-205ENST00000556555 ZMYM4Q5VZL5 1548 aa34.65■■■■□ 3.14
NDUFB1-205ENST00000556555 MAGI2Q86UL8 1455 aa34.62■■■■□ 3.13
NDUFB1-205ENST00000556555 NCOA2Q15596 1464 aa34.61■■■■□ 3.13
NDUFB1-205ENST00000556555 ZNF518AQ6AHZ1 1483 aa34.61■■■■□ 3.13
NDUFB1-205ENST00000556555 CFDP1Q9UEE9 299 aaPredicted RBP34.61■■■■□ 3.13
NDUFB1-205ENST00000556555 ABCC1P33527 1531 aa34.6■■■■□ 3.13
NDUFB1-205ENST00000556555 ITSN2Q9NZM3 1697 aa34.6■■■■□ 3.13
NDUFB1-205ENST00000556555 PLEKHH2Q8IVE3 1493 aa34.57■■■■□ 3.12
NDUFB1-205ENST00000556555 ARHGEF40Q8TER5 1519 aa34.54■■■■□ 3.12
NDUFB1-205ENST00000556555 KIAA1107Q9UPP5 1409 aa34.53■■■■□ 3.12
NDUFB1-205ENST00000556555 KANK4Q5T7N3 995 aaPredicted RBP34.52■■■■□ 3.12
NDUFB1-205ENST00000556555 KDM5CP41229 1560 aa34.52■■■■□ 3.12
NDUFB1-205ENST00000556555 SAMD9LQ8IVG5 1584 aa34.52■■■■□ 3.12
NDUFB1-205ENST00000556555 ZNF777Q9ULD5 760 aaPredicted RBP34.51■■■■□ 3.12
NDUFB1-205ENST00000556555 ZFYVE16Q7Z3T8 1539 aa34.5■■■■□ 3.11
NDUFB1-205ENST00000556555 ARHGEF12Q9NZN5 1544 aa34.49■■■■□ 3.11
NDUFB1-205ENST00000556555 AFAP1Q8N556 730 aa34.46■■■■□ 3.11
NDUFB1-205ENST00000556555 TRAPPC8Q9Y2L5 1435 aa34.44■■■■□ 3.1
NDUFB1-205ENST00000556555 SYCP2Q9BX26 1530 aa34.44■■■■□ 3.1
NDUFB1-205ENST00000556555 MLH3Q9UHC1 1453 aa34.43■■■■□ 3.1
NDUFB1-205ENST00000556555 HECW2Q9P2P5 1572 aa34.41■■■■□ 3.1
NDUFB1-205ENST00000556555 YEATS2Q9ULM3 1422 aa34.41■■■■□ 3.1
NDUFB1-205ENST00000556555 KDM4FA0A1W2PPD8 638 aa34.38■■■■□ 3.09
NDUFB1-205ENST00000556555 MYOM3Q5VTT5 1437 aa34.37■■■■□ 3.09
NDUFB1-205ENST00000556555 ATP10AO60312 1499 aa34.36■■■■□ 3.09
NDUFB1-205ENST00000556555 HNRNPMP52272 730 aaKnown RBP eCLIP34.36■■■■□ 3.09
NDUFB1-205ENST00000556555 AEBP2Q6ZN18 517 aaPredicted RBP34.36■■■■□ 3.09
NDUFB1-205ENST00000556555 MIA2Q96PC5 1412 aa34.36■■■■□ 3.09
NDUFB1-205ENST00000556555 CAMSAP2Q08AD1 1489 aa34.33■■■■□ 3.09
NDUFB1-205ENST00000556555 ZNF644Q9H582 1327 aaPredicted RBP34.32■■■■□ 3.09
NDUFB1-205ENST00000556555 C9orf84Q5VXU9 1444 aa34.32■■■■□ 3.08
NDUFB1-205ENST00000556555 RSPH4AQ5TD94 716 aa34.32■■■■□ 3.08
NDUFB1-205ENST00000556555 MYT1LQ9UL68 1186 aa34.32■■■■□ 3.08
NDUFB1-205ENST00000556555 MBD5Q9P267 1494 aa34.32■■■■□ 3.08
NDUFB1-205ENST00000556555 SPAG9O60271 1321 aaKnown RBP34.3■■■■□ 3.08
NDUFB1-205ENST00000556555 ARID4BQ4LE39 1312 aaPredicted RBP34.29■■■■□ 3.08
NDUFB1-205ENST00000556555 REREQ9P2R6 1566 aa34.27■■■■□ 3.08
NDUFB1-205ENST00000556555 DIP2CQ9Y2E4 1556 aa34.27■■■■□ 3.08
NDUFB1-205ENST00000556555 KIDINS220Q9ULH0 1771 aa34.25■■■■□ 3.07
NDUFB1-205ENST00000556555 CCDC141Q6ZP82 1450 aa34.24■■■■□ 3.07
NDUFB1-205ENST00000556555 ABCA6Q8N139 1617 aa34.22■■■■□ 3.07
NDUFB1-205ENST00000556555 ATP7AQ04656 1500 aa34.22■■■■□ 3.07
NDUFB1-205ENST00000556555 ARHGEF5Q12774 1597 aa34.22■■■■□ 3.07
NDUFB1-205ENST00000556555 INO80Q9ULG1 1556 aaPredicted RBP34.22■■■■□ 3.07
NDUFB1-205ENST00000556555 BCORL1Q5H9F3 1711 aa34.21■■■■□ 3.07
NDUFB1-205ENST00000556555 RTEL1-TNFRSF6BF6WH68 1400 aa34.21■■■■□ 3.07
NDUFB1-205ENST00000556555 ADAMTSL3P82987 1691 aa34.18■■■■□ 3.06
NDUFB1-205ENST00000556555 FGD6Q6ZV73 1430 aa34.15■■■■□ 3.06
NDUFB1-205ENST00000556555 AGLP35573 1532 aa34.14■■■■□ 3.06
NDUFB1-205ENST00000556555 SIGLEC1Q9BZZ2 1709 aa34.13■■■■□ 3.05
NDUFB1-205ENST00000556555 TSPY4P0CV99 314 aa34.11■■■■□ 3.05
NDUFB1-205ENST00000556555 TSPY10P0CW01 314 aa34.11■■■■□ 3.05
NDUFB1-205ENST00000556555 PTPN23Q9H3S7 1636 aa34.11■■■■□ 3.05
NDUFB1-205ENST00000556555 TCOF1Q13428 1488 aaKnown RBP34.09■■■■□ 3.05
NDUFB1-205ENST00000556555 A2MP01023 1474 aa34.06■■■■□ 3.04
NDUFB1-205ENST00000556555 ADGBQ8N7X0 1667 aa34.05■■■■□ 3.04
NDUFB1-205ENST00000556555 MADDQ8WXG6 1647 aa34.04■■■■□ 3.04
NDUFB1-205ENST00000556555 PLXNC1O60486 1568 aa34.03■■■■□ 3.04
NDUFB1-205ENST00000556555 MAST1Q9Y2H9 1570 aa34.03■■■■□ 3.04
NDUFB1-205ENST00000556555 MLECQ14165 292 aa34■■■■□ 3.03
NDUFB1-205ENST00000556555 PTPRMP28827 1452 aa34■■■■□ 3.03
NDUFB1-205ENST00000556555 SHANK2Q9UPX8 1470 aa33.99■■■■□ 3.03
NDUFB1-205ENST00000556555 DHX29Q7Z478 1369 aaKnown RBP33.97■■■■□ 3.03
NDUFB1-205ENST00000556555 FER1L4A9Z1Z3 1794 aa33.95■■■■□ 3.02
NDUFB1-205ENST00000556555 DNMT1P26358 1616 aaKnown RBP33.94■■■■□ 3.02
NDUFB1-205ENST00000556555 ABCC5O15440 1437 aa33.94■■■■□ 3.02
NDUFB1-205ENST00000556555 DAPK1P53355 1430 aa33.93■■■■□ 3.02
NDUFB1-205ENST00000556555 RIMS1Q86UR5 1692 aaKnown RBP33.93■■■■□ 3.02
NDUFB1-205ENST00000556555 CROCC2H7BZ55 1655 aa33.91■■■■□ 3.02
NDUFB1-205ENST00000556555 ESF1Q9H501 851 aaKnown RBP33.87■■■■□ 3.01
NDUFB1-205ENST00000556555 CNTLNQ9NXG0 1405 aa33.87■■■■□ 3.01
NDUFB1-205ENST00000556555 FAM50AQ14320 339 aaKnown RBP33.86■■■■□ 3.01
NDUFB1-205ENST00000556555 PPP6R1Q9UPN7 881 aa33.86■■■■□ 3.01
NDUFB1-205ENST00000556555 PPARGC1BQ86YN6 1023 aaKnown RBP33.83■■■■□ 3.01
NDUFB1-205ENST00000556555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.83■■■■□ 3.01
NDUFB1-205ENST00000556555 DUOX2Q9NRD8 1548 aa33.79■■■■□ 3
NDUFB1-205ENST00000556555 ANKRD30AQ9BXX3 1397 aa33.78■■■■□ 3
NDUFB1-205ENST00000556555 KIF15Q9NS87 1388 aa33.77■■■■□ 3
NDUFB1-205ENST00000556555 FAM135AQ9P2D6 1515 aa33.76■■■■□ 3
NDUFB1-205ENST00000556555 KIF3BO15066 747 aa33.76■■■□□ 2.99
NDUFB1-205ENST00000556555 GGT6Q6P531 493 aa33.76■■■□□ 2.99
NDUFB1-205ENST00000556555 EIF2AK4Q9P2K8 1649 aaKnown RBP33.75■■■□□ 2.99
NDUFB1-205ENST00000556555 ADGRL2O95490 1459 aa33.75■■■□□ 2.99
NDUFB1-205ENST00000556555 ERBINQ96RT1 1412 aa33.72■■■□□ 2.99
NDUFB1-205ENST00000556555 MROH2AA6NES4 1674 aa33.72■■■□□ 2.99
NDUFB1-205ENST00000556555 NCOA1Q15788 1441 aa33.71■■■□□ 2.99
NDUFB1-205ENST00000556555 RRBP1Q9P2E9 1410 aaKnown RBP33.7■■■□□ 2.99
NDUFB1-205ENST00000556555 RRP7BPQ9NSQ0 103 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms