RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 PLCH2O75038 1416 aa26.95■■□□□ 1.9
TUBB3-211ENST00000556536 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
TUBB3-211ENST00000556536 MYOM3Q5VTT5 1437 aa26.88■■□□□ 1.89
TUBB3-211ENST00000556536 CFDP1Q9UEE9 299 aaPredicted RBP26.87■■□□□ 1.89
TUBB3-211ENST00000556536 MYO5CQ9NQX4 1742 aa26.87■■□□□ 1.89
TUBB3-211ENST00000556536 PREX2Q70Z35 1606 aa26.87■■□□□ 1.89
TUBB3-211ENST00000556536 CDC42BPAQ5VT25 1732 aa26.86■■□□□ 1.89
TUBB3-211ENST00000556536 ARHGAP5Q13017 1502 aa26.85■■□□□ 1.89
TUBB3-211ENST00000556536 ARAP3Q8WWN8 1544 aa26.85■■□□□ 1.89
TUBB3-211ENST00000556536 EFCAB2Q5VUJ9 269 aa26.84■■□□□ 1.89
TUBB3-211ENST00000556536 FANCAO15360 1455 aa26.83■■□□□ 1.89
TUBB3-211ENST00000556536 CDC42BPBQ9Y5S2 1711 aa26.82■■□□□ 1.88
TUBB3-211ENST00000556536 ZNF777Q9ULD5 760 aaPredicted RBP26.82■■□□□ 1.88
TUBB3-211ENST00000556536 ZNF644Q9H582 1327 aaPredicted RBP26.81■■□□□ 1.88
TUBB3-211ENST00000556536 ITSN2Q9NZM3 1697 aa26.79■■□□□ 1.88
TUBB3-211ENST00000556536 FGD6Q6ZV73 1430 aa26.79■■□□□ 1.88
TUBB3-211ENST00000556536 MIA2Q96PC5 1412 aa26.79■■□□□ 1.88
TUBB3-211ENST00000556536 NEO1Q92859 1461 aa26.78■■□□□ 1.88
TUBB3-211ENST00000556536 AKNAQ7Z591 1439 aa26.77■■□□□ 1.88
TUBB3-211ENST00000556536 SAMD9LQ8IVG5 1584 aa26.74■■□□□ 1.87
TUBB3-211ENST00000556536 CAMSAP2Q08AD1 1489 aa26.72■■□□□ 1.87
TUBB3-211ENST00000556536 CFAP74Q9C0B2 1584 aa26.71■■□□□ 1.87
TUBB3-211ENST00000556536 TCOF1Q13428 1488 aaKnown RBP26.69■■□□□ 1.86
TUBB3-211ENST00000556536 PTPN23Q9H3S7 1636 aa26.69■■□□□ 1.86
TUBB3-211ENST00000556536 SCAPERQ9BY12 1400 aa26.69■■□□□ 1.86
TUBB3-211ENST00000556536 ARHGEF12Q9NZN5 1544 aa26.69■■□□□ 1.86
TUBB3-211ENST00000556536 RRBP1Q9P2E9 1410 aaKnown RBP26.68■■□□□ 1.86
TUBB3-211ENST00000556536 HNRNPMP52272 730 aaKnown RBP eCLIP26.68■■□□□ 1.86
TUBB3-211ENST00000556536 ABCC1P33527 1531 aa26.68■■□□□ 1.86
TUBB3-211ENST00000556536 FAM50AQ14320 339 aaKnown RBP26.67■■□□□ 1.86
TUBB3-211ENST00000556536 KIAA1107Q9UPP5 1409 aa26.66■■□□□ 1.86
TUBB3-211ENST00000556536 PLEKHH2Q8IVE3 1493 aa26.66■■□□□ 1.86
TUBB3-211ENST00000556536 SYCP2Q9BX26 1530 aa26.65■■□□□ 1.86
TUBB3-211ENST00000556536 MBD5Q9P267 1494 aa26.63■■□□□ 1.85
TUBB3-211ENST00000556536 TRAPPC8Q9Y2L5 1435 aa26.63■■□□□ 1.85
TUBB3-211ENST00000556536 RAPGEF3O95398 923 aa26.62■■□□□ 1.85
TUBB3-211ENST00000556536 DENND4BO75064 1496 aaPredicted RBP26.62■■□□□ 1.85
TUBB3-211ENST00000556536 AFAP1Q8N556 730 aa26.6■■□□□ 1.85
TUBB3-211ENST00000556536 POGZQ7Z3K3 1410 aa26.59■■□□□ 1.85
TUBB3-211ENST00000556536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.58■■□□□ 1.84
TUBB3-211ENST00000556536 ABCC5O15440 1437 aa26.54■■□□□ 1.84
TUBB3-211ENST00000556536 CCDC141Q6ZP82 1450 aa26.54■■□□□ 1.84
TUBB3-211ENST00000556536 ARHGEF5Q12774 1597 aa26.54■■□□□ 1.84
TUBB3-211ENST00000556536 FRMPD1Q5SYB0 1578 aa26.54■■□□□ 1.84
TUBB3-211ENST00000556536 ZNF518AQ6AHZ1 1483 aa26.53■■□□□ 1.84
TUBB3-211ENST00000556536 DAPK1P53355 1430 aa26.52■■□□□ 1.84
TUBB3-211ENST00000556536 RSPH4AQ5TD94 716 aa26.52■■□□□ 1.84
TUBB3-211ENST00000556536 ITGAEP38570 1179 aa26.51■■□□□ 1.83
TUBB3-211ENST00000556536 RICTORQ6R327 1708 aa26.5■■□□□ 1.83
TUBB3-211ENST00000556536 DNMT1P26358 1616 aaKnown RBP26.49■■□□□ 1.83
TUBB3-211ENST00000556536 PTPRKQ15262 1439 aa26.48■■□□□ 1.83
TUBB3-211ENST00000556536 SPAG9O60271 1321 aaKnown RBP26.47■■□□□ 1.83
TUBB3-211ENST00000556536 KDM5CP41229 1560 aa26.47■■□□□ 1.83
TUBB3-211ENST00000556536 FBXO41Q8TF61 875 aa26.47■■□□□ 1.83
TUBB3-211ENST00000556536 TSPY4P0CV99 314 aa26.46■■□□□ 1.83
TUBB3-211ENST00000556536 TSPY10P0CW01 314 aa26.46■■□□□ 1.83
TUBB3-211ENST00000556536 CHIC2Q9UKJ5 165 aa26.44■■□□□ 1.82
TUBB3-211ENST00000556536 C9orf84Q5VXU9 1444 aa26.44■■□□□ 1.82
TUBB3-211ENST00000556536 ZMYM4Q5VZL5 1548 aa26.43■■□□□ 1.82
TUBB3-211ENST00000556536 PTPRMP28827 1452 aa26.42■■□□□ 1.82
TUBB3-211ENST00000556536 MLH3Q9UHC1 1453 aa26.42■■□□□ 1.82
TUBB3-211ENST00000556536 ADAMTSL3P82987 1691 aa26.42■■□□□ 1.82
TUBB3-211ENST00000556536 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
TUBB3-211ENST00000556536 MYT1LQ9UL68 1186 aa26.41■■□□□ 1.82
TUBB3-211ENST00000556536 CROCC2H7BZ55 1655 aa26.39■■□□□ 1.82
TUBB3-211ENST00000556536 TRIM26Q12899 539 aaPredicted RBP26.39■■□□□ 1.82
TUBB3-211ENST00000556536 ZFYVE16Q7Z3T8 1539 aa26.39■■□□□ 1.81
TUBB3-211ENST00000556536 RTEL1-TNFRSF6BF6WH68 1400 aa26.39■■□□□ 1.81
TUBB3-211ENST00000556536 YEATS2Q9ULM3 1422 aa26.39■■□□□ 1.81
TUBB3-211ENST00000556536 INO80Q9ULG1 1556 aaPredicted RBP26.38■■□□□ 1.81
TUBB3-211ENST00000556536 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
TUBB3-211ENST00000556536 ATP7AQ04656 1500 aa26.38■■□□□ 1.81
TUBB3-211ENST00000556536 MAGI2Q86UL8 1455 aa26.37■■□□□ 1.81
TUBB3-211ENST00000556536 KIDINS220Q9ULH0 1771 aa26.35■■□□□ 1.81
TUBB3-211ENST00000556536 ADGRL2O95490 1459 aa26.32■■□□□ 1.8
TUBB3-211ENST00000556536 RRP7BPQ9NSQ0 103 aa26.32■■□□□ 1.8
TUBB3-211ENST00000556536 ANKRD30AQ9BXX3 1397 aa26.32■■□□□ 1.8
TUBB3-211ENST00000556536 NCOA1Q15788 1441 aa26.31■■□□□ 1.8
TUBB3-211ENST00000556536 BCORL1Q5H9F3 1711 aa26.31■■□□□ 1.8
TUBB3-211ENST00000556536 ROCK1Q13464 1354 aa26.31■■□□□ 1.8
TUBB3-211ENST00000556536 ABCA6Q8N139 1617 aa26.3■■□□□ 1.8
TUBB3-211ENST00000556536 DIP2CQ9Y2E4 1556 aa26.29■■□□□ 1.8
TUBB3-211ENST00000556536 ARHGEF40Q8TER5 1519 aa26.29■■□□□ 1.8
TUBB3-211ENST00000556536 KIF15Q9NS87 1388 aa26.28■■□□□ 1.8
TUBB3-211ENST00000556536 PLXNC1O60486 1568 aa26.27■■□□□ 1.8
TUBB3-211ENST00000556536 MADDQ8WXG6 1647 aa26.27■■□□□ 1.8
TUBB3-211ENST00000556536 ATP10AO60312 1499 aa26.26■■□□□ 1.79
TUBB3-211ENST00000556536 ARID4BQ4LE39 1312 aaPredicted RBP26.26■■□□□ 1.79
TUBB3-211ENST00000556536 ADGBQ8N7X0 1667 aa26.25■■□□□ 1.79
TUBB3-211ENST00000556536 LMTK3Q96Q04 1460 aa26.23■■□□□ 1.79
TUBB3-211ENST00000556536 A2MP01023 1474 aa26.23■■□□□ 1.79
TUBB3-211ENST00000556536 DHX29Q7Z478 1369 aaKnown RBP26.22■■□□□ 1.79
TUBB3-211ENST00000556536 NAIPQ13075 1403 aa26.2■■□□□ 1.78
TUBB3-211ENST00000556536 DUOX2Q9NRD8 1548 aa26.19■■□□□ 1.78
TUBB3-211ENST00000556536 HFM1A2PYH4 1435 aa26.19■■□□□ 1.78
TUBB3-211ENST00000556536 REREQ9P2R6 1566 aa26.16■■□□□ 1.78
TUBB3-211ENST00000556536 PCGF6Q9BYE7 350 aa26.15■■□□□ 1.78
TUBB3-211ENST00000556536 RIMS1Q86UR5 1692 aaKnown RBP26.15■■□□□ 1.78
TUBB3-211ENST00000556536 ANKRD50Q9ULJ7 1429 aa26.14■■□□□ 1.78
TUBB3-211ENST00000556536 SIGLEC1Q9BZZ2 1709 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms