RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 PLCH2O75038 1416 aa26.95■■□□□ 1.9
TUBB3-211ENST00000556536 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
TUBB3-211ENST00000556536 MYOM3Q5VTT5 1437 aa26.88■■□□□ 1.89
TUBB3-211ENST00000556536 CFDP1Q9UEE9 299 aaPredicted RBP26.87■■□□□ 1.89
TUBB3-211ENST00000556536 MYO5CQ9NQX4 1742 aa26.87■■□□□ 1.89
TUBB3-211ENST00000556536 PREX2Q70Z35 1606 aa26.87■■□□□ 1.89
TUBB3-211ENST00000556536 CDC42BPAQ5VT25 1732 aa26.86■■□□□ 1.89
TUBB3-211ENST00000556536 ARHGAP5Q13017 1502 aa26.85■■□□□ 1.89
TUBB3-211ENST00000556536 ARAP3Q8WWN8 1544 aa26.85■■□□□ 1.89
TUBB3-211ENST00000556536 EFCAB2Q5VUJ9 269 aa26.84■■□□□ 1.89
TUBB3-211ENST00000556536 FANCAO15360 1455 aa26.83■■□□□ 1.89
TUBB3-211ENST00000556536 CDC42BPBQ9Y5S2 1711 aa26.82■■□□□ 1.88
TUBB3-211ENST00000556536 ZNF777Q9ULD5 760 aaPredicted RBP26.82■■□□□ 1.88
TUBB3-211ENST00000556536 ZNF644Q9H582 1327 aaPredicted RBP26.81■■□□□ 1.88
TUBB3-211ENST00000556536 ITSN2Q9NZM3 1697 aa26.79■■□□□ 1.88
TUBB3-211ENST00000556536 FGD6Q6ZV73 1430 aa26.79■■□□□ 1.88
TUBB3-211ENST00000556536 MIA2Q96PC5 1412 aa26.79■■□□□ 1.88
TUBB3-211ENST00000556536 NEO1Q92859 1461 aa26.78■■□□□ 1.88
TUBB3-211ENST00000556536 AKNAQ7Z591 1439 aa26.77■■□□□ 1.88
TUBB3-211ENST00000556536 SAMD9LQ8IVG5 1584 aa26.74■■□□□ 1.87
TUBB3-211ENST00000556536 CAMSAP2Q08AD1 1489 aa26.72■■□□□ 1.87
TUBB3-211ENST00000556536 CFAP74Q9C0B2 1584 aa26.71■■□□□ 1.87
TUBB3-211ENST00000556536 TCOF1Q13428 1488 aaKnown RBP26.69■■□□□ 1.86
TUBB3-211ENST00000556536 PTPN23Q9H3S7 1636 aa26.69■■□□□ 1.86
TUBB3-211ENST00000556536 SCAPERQ9BY12 1400 aa26.69■■□□□ 1.86
TUBB3-211ENST00000556536 ARHGEF12Q9NZN5 1544 aa26.69■■□□□ 1.86
TUBB3-211ENST00000556536 RRBP1Q9P2E9 1410 aaKnown RBP26.68■■□□□ 1.86
TUBB3-211ENST00000556536 HNRNPMP52272 730 aaKnown RBP eCLIP26.68■■□□□ 1.86
TUBB3-211ENST00000556536 ABCC1P33527 1531 aa26.68■■□□□ 1.86
TUBB3-211ENST00000556536 FAM50AQ14320 339 aaKnown RBP26.67■■□□□ 1.86
TUBB3-211ENST00000556536 KIAA1107Q9UPP5 1409 aa26.66■■□□□ 1.86
TUBB3-211ENST00000556536 PLEKHH2Q8IVE3 1493 aa26.66■■□□□ 1.86
TUBB3-211ENST00000556536 SYCP2Q9BX26 1530 aa26.65■■□□□ 1.86
TUBB3-211ENST00000556536 MBD5Q9P267 1494 aa26.63■■□□□ 1.85
TUBB3-211ENST00000556536 TRAPPC8Q9Y2L5 1435 aa26.63■■□□□ 1.85
TUBB3-211ENST00000556536 RAPGEF3O95398 923 aa26.62■■□□□ 1.85
TUBB3-211ENST00000556536 DENND4BO75064 1496 aaPredicted RBP26.62■■□□□ 1.85
TUBB3-211ENST00000556536 AFAP1Q8N556 730 aa26.6■■□□□ 1.85
TUBB3-211ENST00000556536 POGZQ7Z3K3 1410 aa26.59■■□□□ 1.85
TUBB3-211ENST00000556536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.58■■□□□ 1.84
TUBB3-211ENST00000556536 ABCC5O15440 1437 aa26.54■■□□□ 1.84
TUBB3-211ENST00000556536 CCDC141Q6ZP82 1450 aa26.54■■□□□ 1.84
TUBB3-211ENST00000556536 ARHGEF5Q12774 1597 aa26.54■■□□□ 1.84
TUBB3-211ENST00000556536 FRMPD1Q5SYB0 1578 aa26.54■■□□□ 1.84
TUBB3-211ENST00000556536 ZNF518AQ6AHZ1 1483 aa26.53■■□□□ 1.84
TUBB3-211ENST00000556536 DAPK1P53355 1430 aa26.52■■□□□ 1.84
TUBB3-211ENST00000556536 RSPH4AQ5TD94 716 aa26.52■■□□□ 1.84
TUBB3-211ENST00000556536 ITGAEP38570 1179 aa26.51■■□□□ 1.83
TUBB3-211ENST00000556536 RICTORQ6R327 1708 aa26.5■■□□□ 1.83
TUBB3-211ENST00000556536 DNMT1P26358 1616 aaKnown RBP26.49■■□□□ 1.83
TUBB3-211ENST00000556536 PTPRKQ15262 1439 aa26.48■■□□□ 1.83
TUBB3-211ENST00000556536 SPAG9O60271 1321 aaKnown RBP26.47■■□□□ 1.83
TUBB3-211ENST00000556536 KDM5CP41229 1560 aa26.47■■□□□ 1.83
TUBB3-211ENST00000556536 FBXO41Q8TF61 875 aa26.47■■□□□ 1.83
TUBB3-211ENST00000556536 TSPY4P0CV99 314 aa26.46■■□□□ 1.83
TUBB3-211ENST00000556536 TSPY10P0CW01 314 aa26.46■■□□□ 1.83
TUBB3-211ENST00000556536 CHIC2Q9UKJ5 165 aa26.44■■□□□ 1.82
TUBB3-211ENST00000556536 C9orf84Q5VXU9 1444 aa26.44■■□□□ 1.82
TUBB3-211ENST00000556536 ZMYM4Q5VZL5 1548 aa26.43■■□□□ 1.82
TUBB3-211ENST00000556536 PTPRMP28827 1452 aa26.42■■□□□ 1.82
TUBB3-211ENST00000556536 MLH3Q9UHC1 1453 aa26.42■■□□□ 1.82
TUBB3-211ENST00000556536 ADAMTSL3P82987 1691 aa26.42■■□□□ 1.82
TUBB3-211ENST00000556536 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
TUBB3-211ENST00000556536 MYT1LQ9UL68 1186 aa26.41■■□□□ 1.82
TUBB3-211ENST00000556536 CROCC2H7BZ55 1655 aa26.39■■□□□ 1.82
TUBB3-211ENST00000556536 TRIM26Q12899 539 aaPredicted RBP26.39■■□□□ 1.82
TUBB3-211ENST00000556536 ZFYVE16Q7Z3T8 1539 aa26.39■■□□□ 1.81
TUBB3-211ENST00000556536 RTEL1-TNFRSF6BF6WH68 1400 aa26.39■■□□□ 1.81
TUBB3-211ENST00000556536 YEATS2Q9ULM3 1422 aa26.39■■□□□ 1.81
TUBB3-211ENST00000556536 INO80Q9ULG1 1556 aaPredicted RBP26.38■■□□□ 1.81
TUBB3-211ENST00000556536 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
TUBB3-211ENST00000556536 ATP7AQ04656 1500 aa26.38■■□□□ 1.81
TUBB3-211ENST00000556536 MAGI2Q86UL8 1455 aa26.37■■□□□ 1.81
TUBB3-211ENST00000556536 KIDINS220Q9ULH0 1771 aa26.35■■□□□ 1.81
TUBB3-211ENST00000556536 ADGRL2O95490 1459 aa26.32■■□□□ 1.8
TUBB3-211ENST00000556536 RRP7BPQ9NSQ0 103 aa26.32■■□□□ 1.8
TUBB3-211ENST00000556536 ANKRD30AQ9BXX3 1397 aa26.32■■□□□ 1.8
TUBB3-211ENST00000556536 NCOA1Q15788 1441 aa26.31■■□□□ 1.8
TUBB3-211ENST00000556536 BCORL1Q5H9F3 1711 aa26.31■■□□□ 1.8
TUBB3-211ENST00000556536 ROCK1Q13464 1354 aa26.31■■□□□ 1.8
TUBB3-211ENST00000556536 ABCA6Q8N139 1617 aa26.3■■□□□ 1.8
TUBB3-211ENST00000556536 DIP2CQ9Y2E4 1556 aa26.29■■□□□ 1.8
TUBB3-211ENST00000556536 ARHGEF40Q8TER5 1519 aa26.29■■□□□ 1.8
TUBB3-211ENST00000556536 KIF15Q9NS87 1388 aa26.28■■□□□ 1.8
TUBB3-211ENST00000556536 PLXNC1O60486 1568 aa26.27■■□□□ 1.8
TUBB3-211ENST00000556536 MADDQ8WXG6 1647 aa26.27■■□□□ 1.8
TUBB3-211ENST00000556536 ATP10AO60312 1499 aa26.26■■□□□ 1.79
TUBB3-211ENST00000556536 ARID4BQ4LE39 1312 aaPredicted RBP26.26■■□□□ 1.79
TUBB3-211ENST00000556536 ADGBQ8N7X0 1667 aa26.25■■□□□ 1.79
TUBB3-211ENST00000556536 LMTK3Q96Q04 1460 aa26.23■■□□□ 1.79
TUBB3-211ENST00000556536 A2MP01023 1474 aa26.23■■□□□ 1.79
TUBB3-211ENST00000556536 DHX29Q7Z478 1369 aaKnown RBP26.22■■□□□ 1.79
TUBB3-211ENST00000556536 NAIPQ13075 1403 aa26.2■■□□□ 1.78
TUBB3-211ENST00000556536 DUOX2Q9NRD8 1548 aa26.19■■□□□ 1.78
TUBB3-211ENST00000556536 HFM1A2PYH4 1435 aa26.19■■□□□ 1.78
TUBB3-211ENST00000556536 REREQ9P2R6 1566 aa26.16■■□□□ 1.78
TUBB3-211ENST00000556536 PCGF6Q9BYE7 350 aa26.15■■□□□ 1.78
TUBB3-211ENST00000556536 RIMS1Q86UR5 1692 aaKnown RBP26.15■■□□□ 1.78
TUBB3-211ENST00000556536 ANKRD50Q9ULJ7 1429 aa26.14■■□□□ 1.78
TUBB3-211ENST00000556536 SIGLEC1Q9BZZ2 1709 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms