RNA–Protein interactions for RNA: ENST00000556530.1

PNN-205, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2 BASIC

Gene PNN, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-205ENST00000556530 AKNAQ7Z591 1439 aa30.84■■■□□ 2.53
PNN-205ENST00000556530 PREX2Q70Z35 1606 aa30.84■■■□□ 2.53
PNN-205ENST00000556530 CFAP74Q9C0B2 1584 aa30.83■■■□□ 2.53
PNN-205ENST00000556530 GPATCH8Q9UKJ3 1502 aaKnown RBP30.83■■■□□ 2.53
PNN-205ENST00000556530 COL17A1Q9UMD9 1497 aaPredicted RBP30.83■■■□□ 2.53
PNN-205ENST00000556530 PHLDB1Q86UU1 1377 aa30.83■■■□□ 2.53
PNN-205ENST00000556530 ZNF777Q9ULD5 760 aaPredicted RBP30.83■■■□□ 2.53
PNN-205ENST00000556530 ARAP3Q8WWN8 1544 aa30.81■■■□□ 2.52
PNN-205ENST00000556530 PPARGC1BQ86YN6 1023 aaKnown RBP30.8■■■□□ 2.52
PNN-205ENST00000556530 CFDP1Q9UEE9 299 aaPredicted RBP30.8■■■□□ 2.52
PNN-205ENST00000556530 ADGRL1O94910 1474 aa30.76■■■□□ 2.51
PNN-205ENST00000556530 RAPGEF3O95398 923 aa30.75■■■□□ 2.51
PNN-205ENST00000556530 ITSN2Q9NZM3 1697 aa30.74■■■□□ 2.51
PNN-205ENST00000556530 SCAPERQ9BY12 1400 aa30.73■■■□□ 2.51
PNN-205ENST00000556530 DENND4BO75064 1496 aaPredicted RBP30.7■■■□□ 2.51
PNN-205ENST00000556530 ZNF644Q9H582 1327 aaPredicted RBP30.66■■■□□ 2.5
PNN-205ENST00000556530 SAMD9LQ8IVG5 1584 aa30.66■■■□□ 2.5
PNN-205ENST00000556530 HNRNPMP52272 730 aaKnown RBP eCLIP30.63■■■□□ 2.49
PNN-205ENST00000556530 MYOM3Q5VTT5 1437 aa30.63■■■□□ 2.49
PNN-205ENST00000556530 ABCC1P33527 1531 aa30.62■■■□□ 2.49
PNN-205ENST00000556530 RICTORQ6R327 1708 aa30.61■■■□□ 2.49
PNN-205ENST00000556530 FRMPD1Q5SYB0 1578 aa30.6■■■□□ 2.49
PNN-205ENST00000556530 AFAP1Q8N556 730 aa30.6■■■□□ 2.49
PNN-205ENST00000556530 ARHGEF12Q9NZN5 1544 aa30.6■■■□□ 2.49
PNN-205ENST00000556530 POGZQ7Z3K3 1410 aa30.59■■■□□ 2.49
PNN-205ENST00000556530 MYT1LQ9UL68 1186 aa30.58■■■□□ 2.49
PNN-205ENST00000556530 SYCP2Q9BX26 1530 aa30.57■■■□□ 2.49
PNN-205ENST00000556530 PLEKHH2Q8IVE3 1493 aa30.57■■■□□ 2.48
PNN-205ENST00000556530 TRAPPC8Q9Y2L5 1435 aa30.56■■■□□ 2.48
PNN-205ENST00000556530 CAMSAP2Q08AD1 1489 aa30.55■■■□□ 2.48
PNN-205ENST00000556530 ZNF518AQ6AHZ1 1483 aa30.53■■■□□ 2.48
PNN-205ENST00000556530 MIA2Q96PC5 1412 aa30.53■■■□□ 2.48
PNN-205ENST00000556530 KIAA1107Q9UPP5 1409 aa30.52■■■□□ 2.48
PNN-205ENST00000556530 FGD6Q6ZV73 1430 aa30.48■■■□□ 2.47
PNN-205ENST00000556530 PTPN23Q9H3S7 1636 aa30.46■■■□□ 2.47
PNN-205ENST00000556530 ZMYM4Q5VZL5 1548 aa30.46■■■□□ 2.47
PNN-205ENST00000556530 MBD5Q9P267 1494 aa30.44■■■□□ 2.46
PNN-205ENST00000556530 KDM5CP41229 1560 aa30.43■■■□□ 2.46
PNN-205ENST00000556530 FAM50AQ14320 339 aaKnown RBP30.43■■■□□ 2.46
PNN-205ENST00000556530 SPAG9O60271 1321 aaKnown RBP30.43■■■□□ 2.46
PNN-205ENST00000556530 ZFYVE16Q7Z3T8 1539 aa30.42■■■□□ 2.46
PNN-205ENST00000556530 YEATS2Q9ULM3 1422 aa30.42■■■□□ 2.46
PNN-205ENST00000556530 MAGI2Q86UL8 1455 aa30.4■■■□□ 2.46
PNN-205ENST00000556530 HECW2Q9P2P5 1572 aa30.4■■■□□ 2.46
PNN-205ENST00000556530 RSPH4AQ5TD94 716 aa30.39■■■□□ 2.46
PNN-205ENST00000556530 CCDC141Q6ZP82 1450 aa30.38■■■□□ 2.45
PNN-205ENST00000556530 MLH3Q9UHC1 1453 aa30.37■■■□□ 2.45
PNN-205ENST00000556530 ARHGEF40Q8TER5 1519 aa30.37■■■□□ 2.45
PNN-205ENST00000556530 TCOF1Q13428 1488 aaKnown RBP30.36■■■□□ 2.45
PNN-205ENST00000556530 TSPY4P0CV99 314 aa30.35■■■□□ 2.45
PNN-205ENST00000556530 TSPY10P0CW01 314 aa30.35■■■□□ 2.45
PNN-205ENST00000556530 ARHGEF5Q12774 1597 aa30.35■■■□□ 2.45
PNN-205ENST00000556530 KIDINS220Q9ULH0 1771 aa30.33■■■□□ 2.45
PNN-205ENST00000556530 ARID4BQ4LE39 1312 aaPredicted RBP30.32■■■□□ 2.44
PNN-205ENST00000556530 ATP7AQ04656 1500 aa30.31■■■□□ 2.44
PNN-205ENST00000556530 ATP10AO60312 1499 aa30.3■■■□□ 2.44
PNN-205ENST00000556530 ABCA6Q8N139 1617 aa30.29■■■□□ 2.44
PNN-205ENST00000556530 DIP2CQ9Y2E4 1556 aa30.28■■■□□ 2.44
PNN-205ENST00000556530 INO80Q9ULG1 1556 aaPredicted RBP30.27■■■□□ 2.44
PNN-205ENST00000556530 ABCC5O15440 1437 aa30.26■■■□□ 2.43
PNN-205ENST00000556530 DAPK1P53355 1430 aa30.24■■■□□ 2.43
PNN-205ENST00000556530 C9orf84Q5VXU9 1444 aa30.24■■■□□ 2.43
PNN-205ENST00000556530 DNMT1P26358 1616 aaKnown RBP30.24■■■□□ 2.43
PNN-205ENST00000556530 RTEL1-TNFRSF6BF6WH68 1400 aa30.23■■■□□ 2.43
PNN-205ENST00000556530 ITGAEP38570 1179 aa30.23■■■□□ 2.43
PNN-205ENST00000556530 CHIC2Q9UKJ5 165 aa30.23■■■□□ 2.43
PNN-205ENST00000556530 CROCC2H7BZ55 1655 aa30.19■■■□□ 2.42
PNN-205ENST00000556530 MLECQ14165 292 aa30.18■■■□□ 2.42
PNN-205ENST00000556530 SIGLEC1Q9BZZ2 1709 aa30.18■■■□□ 2.42
PNN-205ENST00000556530 MAST1Q9Y2H9 1570 aa30.17■■■□□ 2.42
PNN-205ENST00000556530 RRBP1Q9P2E9 1410 aaKnown RBP30.17■■■□□ 2.42
PNN-205ENST00000556530 A2MP01023 1474 aa30.15■■■□□ 2.42
PNN-205ENST00000556530 ADGBQ8N7X0 1667 aa30.14■■■□□ 2.42
PNN-205ENST00000556530 SHANK2Q9UPX8 1470 aa30.13■■■□□ 2.41
PNN-205ENST00000556530 RRP7BPQ9NSQ0 103 aa30.13■■■□□ 2.41
PNN-205ENST00000556530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.12■■■□□ 2.41
PNN-205ENST00000556530 KDM4FA0A1W2PPD8 638 aa30.11■■■□□ 2.41
PNN-205ENST00000556530 REREQ9P2R6 1566 aa30.11■■■□□ 2.41
PNN-205ENST00000556530 DHX29Q7Z478 1369 aaKnown RBP30.08■■■□□ 2.41
PNN-205ENST00000556530 PTPRKQ15262 1439 aa30.07■■■□□ 2.4
PNN-205ENST00000556530 ANKRD30AQ9BXX3 1397 aa30.07■■■□□ 2.4
PNN-205ENST00000556530 BCORL1Q5H9F3 1711 aa30.07■■■□□ 2.4
PNN-205ENST00000556530 PLXNC1O60486 1568 aa30.06■■■□□ 2.4
PNN-205ENST00000556530 KIF15Q9NS87 1388 aa30.04■■■□□ 2.4
PNN-205ENST00000556530 AGLP35573 1532 aa30.04■■■□□ 2.4
PNN-205ENST00000556530 KIF3BO15066 747 aa30.02■■■□□ 2.4
PNN-205ENST00000556530 GGT6Q6P531 493 aa30.01■■■□□ 2.39
PNN-205ENST00000556530 NCOA1Q15788 1441 aa30.01■■■□□ 2.39
PNN-205ENST00000556530 DUOX2Q9NRD8 1548 aa29.99■■■□□ 2.39
PNN-205ENST00000556530 ADGRL2O95490 1459 aa29.99■■■□□ 2.39
PNN-205ENST00000556530 ADAMTSL3P82987 1691 aa29.98■■■□□ 2.39
PNN-205ENST00000556530 MADDQ8WXG6 1647 aa29.96■■■□□ 2.39
PNN-205ENST00000556530 ESF1Q9H501 851 aaKnown RBP29.94■■■□□ 2.38
PNN-205ENST00000556530 PLPPR3Q6T4P5 718 aa29.93■■■□□ 2.38
PNN-205ENST00000556530 AEBP2Q6ZN18 517 aaPredicted RBP29.92■■■□□ 2.38
PNN-205ENST00000556530 FER1L4A9Z1Z3 1794 aa29.92■■■□□ 2.38
PNN-205ENST00000556530 RIMS1Q86UR5 1692 aaKnown RBP29.91■■■□□ 2.38
PNN-205ENST00000556530 ROCK1Q13464 1354 aa29.91■■■□□ 2.38
PNN-205ENST00000556530 ERBINQ96RT1 1412 aa29.88■■■□□ 2.37
PNN-205ENST00000556530 EIF2AK4Q9P2K8 1649 aaKnown RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms