RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 CDC42BPAQ5VT25 1732 aa16.5■□□□□ 0.23
HNRNPC-225ENST00000556513 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
HNRNPC-225ENST00000556513 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
HNRNPC-225ENST00000556513 EFCAB2Q5VUJ9 269 aa16.46■□□□□ 0.23
HNRNPC-225ENST00000556513 SCAPERQ9BY12 1400 aa16.46■□□□□ 0.23
HNRNPC-225ENST00000556513 ARHGEF40Q8TER5 1519 aa16.43■□□□□ 0.22
HNRNPC-225ENST00000556513 MTUS2Q5JR59 1369 aa16.43■□□□□ 0.22
HNRNPC-225ENST00000556513 POGZQ7Z3K3 1410 aa16.43■□□□□ 0.22
HNRNPC-225ENST00000556513 ZMYM4Q5VZL5 1548 aa16.42■□□□□ 0.22
HNRNPC-225ENST00000556513 FOXD1Q16676 465 aa16.42■□□□□ 0.22
HNRNPC-225ENST00000556513 ZFYVE16Q7Z3T8 1539 aa16.4■□□□□ 0.22
HNRNPC-225ENST00000556513 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
HNRNPC-225ENST00000556513 ITSN2Q9NZM3 1697 aa16.4■□□□□ 0.22
HNRNPC-225ENST00000556513 EHBP1L1Q8N3D4 1523 aa16.39■□□□□ 0.21
HNRNPC-225ENST00000556513 SIGLEC1Q9BZZ2 1709 aa16.39■□□□□ 0.21
HNRNPC-225ENST00000556513 ABCC1P33527 1531 aa16.38■□□□□ 0.21
HNRNPC-225ENST00000556513 YEATS2Q9ULM3 1422 aa16.38■□□□□ 0.21
HNRNPC-225ENST00000556513 TIAM1Q13009 1591 aa16.38■□□□□ 0.21
HNRNPC-225ENST00000556513 ARID4BQ4LE39 1312 aaPredicted RBP16.38■□□□□ 0.21
HNRNPC-225ENST00000556513 GPATCH8Q9UKJ3 1502 aaKnown RBP16.38■□□□□ 0.21
HNRNPC-225ENST00000556513 BCORL1Q5H9F3 1711 aa16.37■□□□□ 0.21
HNRNPC-225ENST00000556513 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
HNRNPC-225ENST00000556513 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
HNRNPC-225ENST00000556513 ZNF518AQ6AHZ1 1483 aa16.37■□□□□ 0.21
HNRNPC-225ENST00000556513 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
HNRNPC-225ENST00000556513 MAGI2Q86UL8 1455 aa16.36■□□□□ 0.21
HNRNPC-225ENST00000556513 AFAP1Q8N556 730 aa16.36■□□□□ 0.21
HNRNPC-225ENST00000556513 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
HNRNPC-225ENST00000556513 ARHGEF12Q9NZN5 1544 aa16.35■□□□□ 0.21
HNRNPC-225ENST00000556513 KDM5CP41229 1560 aa16.35■□□□□ 0.21
HNRNPC-225ENST00000556513 ADAMTSL3P82987 1691 aa16.35■□□□□ 0.21
HNRNPC-225ENST00000556513 HECW2Q9P2P5 1572 aa16.34■□□□□ 0.21
HNRNPC-225ENST00000556513 MYT1LQ9UL68 1186 aa16.34■□□□□ 0.21
HNRNPC-225ENST00000556513 SYCP2Q9BX26 1530 aa16.33■□□□□ 0.2
HNRNPC-225ENST00000556513 TRAPPC8Q9Y2L5 1435 aa16.32■□□□□ 0.2
HNRNPC-225ENST00000556513 MAP3K1Q13233 1512 aa16.32■□□□□ 0.2
HNRNPC-225ENST00000556513 MADDQ8WXG6 1647 aa16.32■□□□□ 0.2
HNRNPC-225ENST00000556513 CFDP1Q9UEE9 299 aaPredicted RBP16.32■□□□□ 0.2
HNRNPC-225ENST00000556513 ABCA6Q8N139 1617 aa16.3■□□□□ 0.2
HNRNPC-225ENST00000556513 RIMS1Q86UR5 1692 aaKnown RBP16.3■□□□□ 0.2
HNRNPC-225ENST00000556513 DIP2CQ9Y2E4 1556 aa16.3■□□□□ 0.2
HNRNPC-225ENST00000556513 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
HNRNPC-225ENST00000556513 ATP10AO60312 1499 aa16.29■□□□□ 0.2
HNRNPC-225ENST00000556513 NCOA2Q15596 1464 aa16.29■□□□□ 0.2
HNRNPC-225ENST00000556513 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.25e-7■■■■□ 19.9
HNRNPC-225ENST00000556513 LRRC9Q6ZRR7 1453 aa16.28■□□□□ 0.2
HNRNPC-225ENST00000556513 FER1L4A9Z1Z3 1794 aa16.27■□□□□ 0.2
HNRNPC-225ENST00000556513 C9orf84Q5VXU9 1444 aa16.27■□□□□ 0.19
HNRNPC-225ENST00000556513 MLECQ14165 292 aa16.27■□□□□ 0.19
HNRNPC-225ENST00000556513 MLH3Q9UHC1 1453 aa16.27■□□□□ 0.19
HNRNPC-225ENST00000556513 ZNF644Q9H582 1327 aaPredicted RBP16.26■□□□□ 0.19
HNRNPC-225ENST00000556513 PTPRMP28827 1452 aa16.26■□□□□ 0.19
HNRNPC-225ENST00000556513 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
HNRNPC-225ENST00000556513 KANK4Q5T7N3 995 aaPredicted RBP16.25■□□□□ 0.19
HNRNPC-225ENST00000556513 KIAA1107Q9UPP5 1409 aa16.23■□□□□ 0.19
HNRNPC-225ENST00000556513 APLP2Q06481 763 aa16.21■□□□□ 0.19
HNRNPC-225ENST00000556513 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
HNRNPC-225ENST00000556513 SPAG9O60271 1321 aaKnown RBP16.21■□□□□ 0.19
HNRNPC-225ENST00000556513 CAMSAP2Q08AD1 1489 aa16.21■□□□□ 0.19
HNRNPC-225ENST00000556513 ATP7AQ04656 1500 aa16.21■□□□□ 0.19
HNRNPC-225ENST00000556513 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.19
HNRNPC-225ENST00000556513 REREQ9P2R6 1566 aa16.2■□□□□ 0.18
HNRNPC-225ENST00000556513 MBD5Q9P267 1494 aa16.18■□□□□ 0.18
HNRNPC-225ENST00000556513 ADGBQ8N7X0 1667 aa16.15■□□□□ 0.18
HNRNPC-225ENST00000556513 AGLP35573 1532 aa16.14■□□□□ 0.17
HNRNPC-225ENST00000556513 MYOM3Q5VTT5 1437 aa16.14■□□□□ 0.17
HNRNPC-225ENST00000556513 CCDC141Q6ZP82 1450 aa16.13■□□□□ 0.17
HNRNPC-225ENST00000556513 PLXNC1O60486 1568 aa16.12■□□□□ 0.17
HNRNPC-225ENST00000556513 ARHGEF5Q12774 1597 aa16.12■□□□□ 0.17
HNRNPC-225ENST00000556513 A2MP01023 1474 aa16.11■□□□□ 0.17
HNRNPC-225ENST00000556513 C3P01024 1663 aa16.1■□□□□ 0.17
HNRNPC-225ENST00000556513 CEBPAP49715 358 aaPredicted RBP16.09■□□□□ 0.17
HNRNPC-225ENST00000556513 PTPN23Q9H3S7 1636 aa16.08■□□□□ 0.17
HNRNPC-225ENST00000556513 MIA2Q96PC5 1412 aa16.08■□□□□ 0.17
HNRNPC-225ENST00000556513 RTEL1-TNFRSF6BF6WH68 1400 aa16.08■□□□□ 0.16
HNRNPC-225ENST00000556513 CLTCQ00610 1675 aaKnown RBP16.07■□□□□ 0.16
HNRNPC-225ENST00000556513 ESF1Q9H501 851 aaKnown RBP16.07■□□□□ 0.16
HNRNPC-225ENST00000556513 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
HNRNPC-225ENST00000556513 LMTK3Q96Q04 1460 aa16.06■□□□□ 0.16
HNRNPC-225ENST00000556513 CROCC2H7BZ55 1655 aa16.05■□□□□ 0.16
HNRNPC-225ENST00000556513 PREX1Q8TCU6 1659 aa16.05■□□□□ 0.16
HNRNPC-225ENST00000556513 TSPY4P0CV99 314 aa16.05■□□□□ 0.16
HNRNPC-225ENST00000556513 TSPY10P0CW01 314 aa16.05■□□□□ 0.16
HNRNPC-225ENST00000556513 GGT6Q6P531 493 aa16.04■□□□□ 0.16
HNRNPC-225ENST00000556513 SETD1BQ9UPS6 1966 aaKnown RBP16.04■□□□□ 0.16
HNRNPC-225ENST00000556513 MROH2AA6NES4 1674 aa16.04■□□□□ 0.16
HNRNPC-225ENST00000556513 MAST1Q9Y2H9 1570 aa16.03■□□□□ 0.16
HNRNPC-225ENST00000556513 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
HNRNPC-225ENST00000556513 DHX29Q7Z478 1369 aaKnown RBP16.02■□□□□ 0.16
HNRNPC-225ENST00000556513 CNTLNQ9NXG0 1405 aa16■□□□□ 0.15
HNRNPC-225ENST00000556513 DNMT1P26358 1616 aaKnown RBP16■□□□□ 0.15
HNRNPC-225ENST00000556513 HSPA2P54652 639 aa16■□□□□ 0.15
HNRNPC-225ENST00000556513 KIF3BO15066 747 aa15.99■□□□□ 0.15
HNRNPC-225ENST00000556513 PPARGC1BQ86YN6 1023 aaKnown RBP15.98■□□□□ 0.15
HNRNPC-225ENST00000556513 TCOF1Q13428 1488 aaKnown RBP15.98■□□□□ 0.15
HNRNPC-225ENST00000556513 ABCC5O15440 1437 aa15.97■□□□□ 0.15
HNRNPC-225ENST00000556513 DAPK1P53355 1430 aa15.96■□□□□ 0.15
HNRNPC-225ENST00000556513 ZMYM3Q14202 1370 aa15.96■□□□□ 0.15
HNRNPC-225ENST00000556513 SHANK2Q9UPX8 1470 aa15.95■□□□□ 0.14
HNRNPC-225ENST00000556513 EIF2AK4Q9P2K8 1649 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms