RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 HOXB3P14651 431 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-241ENST00000556374 HS6ST3Q8IZP7 471 aa9.53□□□□□ -0.88
ATXN3-241ENST00000556374 FAM205CA6NFA0 338 aa9.52□□□□□ -0.89
ATXN3-241ENST00000556374 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-241ENST00000556374 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
ATXN3-241ENST00000556374 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
ATXN3-241ENST00000556374 RYDENQ9NUL5 291 aaKnown RBP9.5□□□□□ -0.89
ATXN3-241ENST00000556374 POTEB3A0JP26 581 aa9.48□□□□□ -0.89
ATXN3-241ENST00000556374 POTEBQ6S5H4 581 aa9.48□□□□□ -0.89
ATXN3-241ENST00000556374 TMEM92Q6UXU6 159 aa9.48□□□□□ -0.89
ATXN3-241ENST00000556374 KIF3CO14782 793 aa9.45□□□□□ -0.9
ATXN3-241ENST00000556374 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
ATXN3-241ENST00000556374 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
ATXN3-241ENST00000556374 SLC34A2O95436 690 aa9.41□□□□□ -0.9
ATXN3-241ENST00000556374 GPR153Q6NV75 609 aa9.4□□□□□ -0.9
ATXN3-241ENST00000556374 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
ATXN3-241ENST00000556374 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
ATXN3-241ENST00000556374 C2orf72A6NCS6 295 aa9.36□□□□□ -0.91
ATXN3-241ENST00000556374 ERBB3P21860 1342 aa9.35□□□□□ -0.91
ATXN3-241ENST00000556374 PPP1R37O75864 691 aa9.34□□□□□ -0.91
ATXN3-241ENST00000556374 ZNF687Q8N1G0 1237 aa9.32□□□□□ -0.92
ATXN3-241ENST00000556374 GPHNQ9NQX3 736 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-241ENST00000556374 FOXK1P85037 733 aa9.31□□□□□ -0.92
ATXN3-241ENST00000556374 NKX1-1Q15270 411 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-241ENST00000556374 PSDA5PKW4 1024 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-241ENST00000556374 ZNF316A6NFI3 1004 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-241ENST00000556374 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
ATXN3-241ENST00000556374 VARS2Q5ST30 1063 aaKnown RBP9.27□□□□□ -0.93
ATXN3-241ENST00000556374 PTCD2Q8WV60 388 aaKnown RBP9.27□□□□□ -0.93
ATXN3-241ENST00000556374 RNF166Q96A37 237 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-241ENST00000556374 PTGER2P43116 358 aa9.25□□□□□ -0.93
ATXN3-241ENST00000556374 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
ATXN3-241ENST00000556374 NISCHQ9Y2I1 1504 aa9.25□□□□□ -0.93
ATXN3-241ENST00000556374 TBC1D12O60347 775 aa9.24□□□□□ -0.93
ATXN3-241ENST00000556374 PBX2P40425 430 aa9.23□□□□□ -0.93
ATXN3-241ENST00000556374 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-241ENST00000556374 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
ATXN3-241ENST00000556374 PDE4AP27815 886 aa9.21□□□□□ -0.94
ATXN3-241ENST00000556374 PLPP6Q8IY26 295 aa9.21□□□□□ -0.94
ATXN3-241ENST00000556374 MYT1LQ9UL68 1186 aa9.21□□□□□ -0.94
ATXN3-241ENST00000556374 KDM4FA0A1W2PPD8 638 aa9.19□□□□□ -0.94
ATXN3-241ENST00000556374 NUDT7P0C024 238 aa9.19□□□□□ -0.94
ATXN3-241ENST00000556374 AMER1Q5JTC6 1135 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-241ENST00000556374 DSG2Q14126 1118 aa9.18□□□□□ -0.94
ATXN3-241ENST00000556374 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.94
ATXN3-241ENST00000556374 LHX6Q9UPM6 363 aa9.15□□□□□ -0.94
ATXN3-241ENST00000556374 ANKRD13DQ6ZTN6 518 aa9.14□□□□□ -0.95
ATXN3-241ENST00000556374 OXER1Q8TDS5 423 aa9.14□□□□□ -0.95
ATXN3-241ENST00000556374 PPP1R15BQ5SWA1 713 aa9.13□□□□□ -0.95
ATXN3-241ENST00000556374 BBXQ8WY36 941 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-241ENST00000556374 DCAF8L2P0C7V8 631 aa9.12□□□□□ -0.95
ATXN3-241ENST00000556374 MFSD10Q14728 455 aa9.12□□□□□ -0.95
ATXN3-241ENST00000556374 NCKAP5LQ9HCH0 1330 aa9.11□□□□□ -0.95
ATXN3-241ENST00000556374 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.95
ATXN3-241ENST00000556374 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
ATXN3-241ENST00000556374 DDX27Q96GQ7 796 aaKnown RBP9.09□□□□□ -0.95
ATXN3-241ENST00000556374 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
ATXN3-241ENST00000556374 ANO8Q9HCE9 1232 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-241ENST00000556374 TK2O00142 265 aa9.07□□□□□ -0.96
ATXN3-241ENST00000556374 LARP6Q9BRS8 491 aaKnown RBP9.05□□□□□ -0.96
ATXN3-241ENST00000556374 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
ATXN3-241ENST00000556374 KCNH8Q96L42 1107 aa9.04□□□□□ -0.96
ATXN3-241ENST00000556374 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-241ENST00000556374 SLC4A5Q9BY07 1137 aa9.01□□□□□ -0.97
ATXN3-241ENST00000556374 SPRYD3Q8NCJ5 442 aa9□□□□□ -0.97
ATXN3-241ENST00000556374 JPH4Q96JJ6 628 aa9□□□□□ -0.97
ATXN3-241ENST00000556374 BCL2L12Q9HB09 334 aa9□□□□□ -0.97
ATXN3-241ENST00000556374 FOSBP53539 338 aa8.99□□□□□ -0.97
ATXN3-241ENST00000556374 CAMK2BQ13554 666 aa8.99□□□□□ -0.97
ATXN3-241ENST00000556374 ADGRD1Q6QNK2 874 aa8.99□□□□□ -0.97
ATXN3-241ENST00000556374 MAP3K9P80192 1104 aa8.98□□□□□ -0.97
ATXN3-241ENST00000556374 UPF1Q92900 1129 aaKnown RBP eCLIP8.98□□□□□ -0.97
ATXN3-241ENST00000556374 EVI5O60447 810 aa8.97□□□□□ -0.97
ATXN3-241ENST00000556374 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
ATXN3-241ENST00000556374 HRO43593 1189 aa8.96□□□□□ -0.98
ATXN3-241ENST00000556374 ZNF454Q8N9F8 522 aa8.95□□□□□ -0.98
ATXN3-241ENST00000556374 PTPREP23469 700 aa8.94□□□□□ -0.98
ATXN3-241ENST00000556374 CADPS2Q86UW7 1296 aa8.94□□□□□ -0.98
ATXN3-241ENST00000556374 RTN4Q9NQC3 1192 aaKnown RBP8.94□□□□□ -0.98
ATXN3-241ENST00000556374 FBXW7Q969H0 707 aa8.93□□□□□ -0.98
ATXN3-241ENST00000556374 ZDHHC16Q969W1 377 aa8.93□□□□□ -0.98
ATXN3-241ENST00000556374 EMILIN3Q9NT22 766 aa8.93□□□□□ -0.98
ATXN3-241ENST00000556374 PLA2G2EQ9NZK7 142 aa8.93□□□□□ -0.98
ATXN3-241ENST00000556374 PHF14O94880 888 aa8.91□□□□□ -0.98
ATXN3-241ENST00000556374 PSEN2P49810 448 aa8.91□□□□□ -0.98
ATXN3-241ENST00000556374 DMRTA1Q5VZB9 504 aa8.91□□□□□ -0.98
ATXN3-241ENST00000556374 ABCC9O60706 1549 aa8.9□□□□□ -0.98
ATXN3-241ENST00000556374 KCNK17Q96T54 332 aa8.9□□□□□ -0.98
ATXN3-241ENST00000556374 HCSTQ9UBK5 93 aa8.9□□□□□ -0.98
ATXN3-241ENST00000556374 STAC3Q96MF2 364 aa8.89□□□□□ -0.99
ATXN3-241ENST00000556374 EPAS1Q99814 870 aa8.89□□□□□ -0.99
ATXN3-241ENST00000556374 VPS9D1Q9Y2B5 631 aa8.89□□□□□ -0.99
ATXN3-241ENST00000556374 ARIH1Q9Y4X5 557 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-241ENST00000556374 TYW1BQ6NUM6 668 aa8.88□□□□□ -0.99
ATXN3-241ENST00000556374 ONECUT3O60422 494 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-241ENST00000556374 SPDYE16A6NNV3 312 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-241ENST00000556374 BHMG1C9JSJ3 638 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-241ENST00000556374 ZBED2Q9BTP6 218 aa8.86□□□□□ -0.99
ATXN3-241ENST00000556374 PCDHGA10Q9Y5H3 936 aa8.86□□□□□ -0.99
ATXN3-241ENST00000556374 PPP1R3GB7ZBB8 358 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms