RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 MAPKBP1O60336 1514 aa15.57■□□□□ 0.08
MTHFD1-213ENST00000556284 MAGI3Q5TCQ9 1506 aa15.55■□□□□ 0.08
MTHFD1-213ENST00000556284 EHBP1L1Q8N3D4 1523 aa15.55■□□□□ 0.08
MTHFD1-213ENST00000556284 KCNH8Q96L42 1107 aa15.55■□□□□ 0.08
MTHFD1-213ENST00000556284 PPARGC1BQ86YN6 1023 aaKnown RBP15.53■□□□□ 0.08
MTHFD1-213ENST00000556284 C1QBPQ07021 282 aaKnown RBP15.52■□□□□ 0.08
MTHFD1-213ENST00000556284 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
MTHFD1-213ENST00000556284 KIF14Q15058 1648 aa15.47■□□□□ 0.07
MTHFD1-213ENST00000556284 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
MTHFD1-213ENST00000556284 ABCC10Q5T3U5 1492 aa15.46■□□□□ 0.07
MTHFD1-213ENST00000556284 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.07
MTHFD1-213ENST00000556284 FAM69CQ0P6D2 419 aa15.46■□□□□ 0.07
MTHFD1-213ENST00000556284 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.07
MTHFD1-213ENST00000556284 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.44■□□□□ 0.06
MTHFD1-213ENST00000556284 PHLDB1Q86UU1 1377 aa15.43■□□□□ 0.06
MTHFD1-213ENST00000556284 GLI2P10070 1586 aa15.43■□□□□ 0.06
MTHFD1-213ENST00000556284 GPATCH8Q9UKJ3 1502 aaKnown RBP15.42■□□□□ 0.06
MTHFD1-213ENST00000556284 ABCA9Q8IUA7 1624 aa15.41■□□□□ 0.06
MTHFD1-213ENST00000556284 PLCH2O75038 1416 aa15.41■□□□□ 0.06
MTHFD1-213ENST00000556284 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
MTHFD1-213ENST00000556284 CD109Q6YHK3 1445 aa15.41■□□□□ 0.06
MTHFD1-213ENST00000556284 DIP2BQ9P265 1576 aa15.41■□□□□ 0.06
MTHFD1-213ENST00000556284 CFDP1Q9UEE9 299 aaPredicted RBP15.4■□□□□ 0.06
MTHFD1-213ENST00000556284 TTC37Q6PGP7 1564 aa15.38■□□□□ 0.05
MTHFD1-213ENST00000556284 MIA2Q96PC5 1412 aa15.38■□□□□ 0.05
MTHFD1-213ENST00000556284 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
MTHFD1-213ENST00000556284 EFCAB2Q5VUJ9 269 aa15.38■□□□□ 0.05
MTHFD1-213ENST00000556284 ARAP3Q8WWN8 1544 aa15.37■□□□□ 0.05
MTHFD1-213ENST00000556284 FGD6Q6ZV73 1430 aa15.35■□□□□ 0.05
MTHFD1-213ENST00000556284 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
MTHFD1-213ENST00000556284 MAP3K4Q9Y6R4 1608 aa15.33■□□□□ 0.04
MTHFD1-213ENST00000556284 RRBP1Q9P2E9 1410 aaKnown RBP15.33■□□□□ 0.04
MTHFD1-213ENST00000556284 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.04
MTHFD1-213ENST00000556284 ITSN2Q9NZM3 1697 aa15.32■□□□□ 0.04
MTHFD1-213ENST00000556284 CDC42BPAQ5VT25 1732 aa15.32■□□□□ 0.04
MTHFD1-213ENST00000556284 MYO5CQ9NQX4 1742 aa15.32■□□□□ 0.04
MTHFD1-213ENST00000556284 ZNF777Q9ULD5 760 aaPredicted RBP15.32■□□□□ 0.04
MTHFD1-213ENST00000556284 PREX2Q70Z35 1606 aa15.32■□□□□ 0.04
MTHFD1-213ENST00000556284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.31■□□□□ 0.04
MTHFD1-213ENST00000556284 FANCAO15360 1455 aa15.31■□□□□ 0.04
MTHFD1-213ENST00000556284 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
MTHFD1-213ENST00000556284 CAPN15O75808 1086 aa15.3■□□□□ 0.04
MTHFD1-213ENST00000556284 TEX14Q8IWB6 1497 aa15.3■□□□□ 0.04
MTHFD1-213ENST00000556284 NEO1Q92859 1461 aa15.3■□□□□ 0.04
MTHFD1-213ENST00000556284 ZNF644Q9H582 1327 aaPredicted RBP15.3■□□□□ 0.04
MTHFD1-213ENST00000556284 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
MTHFD1-213ENST00000556284 TCOF1Q13428 1488 aaKnown RBP15.29■□□□□ 0.04
MTHFD1-213ENST00000556284 PLEKHH2Q8IVE3 1493 aa15.29■□□□□ 0.04
MTHFD1-213ENST00000556284 FAM50AQ14320 339 aaKnown RBP15.29■□□□□ 0.04
MTHFD1-213ENST00000556284 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
MTHFD1-213ENST00000556284 AKNAQ7Z591 1439 aa15.28■□□□□ 0.04
MTHFD1-213ENST00000556284 KIAA1107Q9UPP5 1409 aa15.28■□□□□ 0.04
MTHFD1-213ENST00000556284 TRIM26Q12899 539 aaPredicted RBP15.28■□□□□ 0.04
MTHFD1-213ENST00000556284 RSPH4AQ5TD94 716 aa15.28■□□□□ 0.04
MTHFD1-213ENST00000556284 PTPN23Q9H3S7 1636 aa15.27■□□□□ 0.03
MTHFD1-213ENST00000556284 CAMSAP2Q08AD1 1489 aa15.26■□□□□ 0.03
MTHFD1-213ENST00000556284 CFAP74Q9C0B2 1584 aa15.25■□□□□ 0.03
MTHFD1-213ENST00000556284 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
MTHFD1-213ENST00000556284 SCAPERQ9BY12 1400 aa15.24■□□□□ 0.03
MTHFD1-213ENST00000556284 SAMD9LQ8IVG5 1584 aa15.24■□□□□ 0.03
MTHFD1-213ENST00000556284 ADGRL1O94910 1474 aa15.23■□□□□ 0.03
MTHFD1-213ENST00000556284 PPRC1Q5VV67 1664 aaKnown RBP15.22■□□□□ 0.03
MTHFD1-213ENST00000556284 MBD5Q9P267 1494 aa15.22■□□□□ 0.03
MTHFD1-213ENST00000556284 TSPOAP1O95153 1857 aa15.21■□□□□ 0.03
MTHFD1-213ENST00000556284 ABCC1P33527 1531 aa15.21■□□□□ 0.03
MTHFD1-213ENST00000556284 TSPY4P0CV99 314 aa15.2■□□□□ 0.02
MTHFD1-213ENST00000556284 TSPY10P0CW01 314 aa15.2■□□□□ 0.02
MTHFD1-213ENST00000556284 ARHGEF12Q9NZN5 1544 aa15.2■□□□□ 0.02
MTHFD1-213ENST00000556284 SYCP2Q9BX26 1530 aa15.19■□□□□ 0.02
MTHFD1-213ENST00000556284 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
MTHFD1-213ENST00000556284 ARHGEF5Q12774 1597 aa15.19■□□□□ 0.02
MTHFD1-213ENST00000556284 ABCC5O15440 1437 aa15.18■□□□□ 0.02
MTHFD1-213ENST00000556284 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
MTHFD1-213ENST00000556284 ITGAEP38570 1179 aa15.18■□□□□ 0.02
MTHFD1-213ENST00000556284 AFAP1Q8N556 730 aa15.18■□□□□ 0.02
MTHFD1-213ENST00000556284 CCDC141Q6ZP82 1450 aa15.18■□□□□ 0.02
MTHFD1-213ENST00000556284 DAPK1P53355 1430 aa15.17■□□□□ 0.02
MTHFD1-213ENST00000556284 POGZQ7Z3K3 1410 aa15.17■□□□□ 0.02
MTHFD1-213ENST00000556284 ZNF518AQ6AHZ1 1483 aa15.16■□□□□ 0.02
MTHFD1-213ENST00000556284 RAPGEF3O95398 923 aa15.16■□□□□ 0.02
MTHFD1-213ENST00000556284 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
MTHFD1-213ENST00000556284 SPAG9O60271 1321 aaKnown RBP15.15■□□□□ 0.02
MTHFD1-213ENST00000556284 DNMT1P26358 1616 aaKnown RBP15.14■□□□□ 0.01
MTHFD1-213ENST00000556284 PTPRKQ15262 1439 aa15.14■□□□□ 0.01
MTHFD1-213ENST00000556284 COL17A1Q9UMD9 1497 aaPredicted RBP15.14■□□□□ 0.01
MTHFD1-213ENST00000556284 SHANK2Q9UPX8 1470 aa15.14■□□□□ 0.01
MTHFD1-213ENST00000556284 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
MTHFD1-213ENST00000556284 RTEL1-TNFRSF6BF6WH68 1400 aa15.12■□□□□ 0.01
MTHFD1-213ENST00000556284 CHIC2Q9UKJ5 165 aa15.12■□□□□ 0.01
MTHFD1-213ENST00000556284 ROCK1Q13464 1354 aa15.11■□□□□ 0.01
MTHFD1-213ENST00000556284 PCGF6Q9BYE7 350 aa15.11■□□□□ 0.01
MTHFD1-213ENST00000556284 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
MTHFD1-213ENST00000556284 MLH3Q9UHC1 1453 aa15.1■□□□□ 0.01
MTHFD1-213ENST00000556284 MYT1LQ9UL68 1186 aa15.1■□□□□ 0.01
MTHFD1-213ENST00000556284 KDM5CP41229 1560 aa15.1■□□□□ 0.01
MTHFD1-213ENST00000556284 MAST1Q9Y2H9 1570 aa15.09■□□□□ 0.01
MTHFD1-213ENST00000556284 NCOA1Q15788 1441 aa15.09■□□□□ 0.01
MTHFD1-213ENST00000556284 ADGRL2O95490 1459 aa15.08■□□□□ 0.01
MTHFD1-213ENST00000556284 MAGI2Q86UL8 1455 aa15.08■□□□□ 0.01
MTHFD1-213ENST00000556284 RICTORQ6R327 1708 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms