RNA–Protein interactions for RNA: ENST00000556216.5

CGRRF1-204, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 5

Gene CGRRF1, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-204ENST00000556216 ARHGAP5Q13017 1502 aa23.74■■□□□ 1.39
CGRRF1-204ENST00000556216 CDC42BPAQ5VT25 1732 aa23.69■■□□□ 1.38
CGRRF1-204ENST00000556216 PREX2Q70Z35 1606 aa23.68■■□□□ 1.38
CGRRF1-204ENST00000556216 POGZQ7Z3K3 1410 aa23.68■■□□□ 1.38
CGRRF1-204ENST00000556216 YEATS2Q9ULM3 1422 aa23.67■■□□□ 1.38
CGRRF1-204ENST00000556216 AFAP1Q8N556 730 aa23.66■■□□□ 1.38
CGRRF1-204ENST00000556216 ZMYM4Q5VZL5 1548 aa23.65■■□□□ 1.38
CGRRF1-204ENST00000556216 MTUS2Q5JR59 1369 aa23.65■■□□□ 1.38
CGRRF1-204ENST00000556216 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.38
CGRRF1-204ENST00000556216 SIGLEC1Q9BZZ2 1709 aa23.63■■□□□ 1.37
CGRRF1-204ENST00000556216 ARHGEF12Q9NZN5 1544 aa23.63■■□□□ 1.37
CGRRF1-204ENST00000556216 GPATCH8Q9UKJ3 1502 aaKnown RBP23.63■■□□□ 1.37
CGRRF1-204ENST00000556216 ZNF777Q9ULD5 760 aaPredicted RBP23.61■■□□□ 1.37
CGRRF1-204ENST00000556216 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
CGRRF1-204ENST00000556216 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
CGRRF1-204ENST00000556216 ZFYVE16Q7Z3T8 1539 aa23.61■■□□□ 1.37
CGRRF1-204ENST00000556216 ABCC1P33527 1531 aa23.58■■□□□ 1.37
CGRRF1-204ENST00000556216 TRAPPC8Q9Y2L5 1435 aa23.58■■□□□ 1.37
CGRRF1-204ENST00000556216 ZNF518AQ6AHZ1 1483 aa23.57■■□□□ 1.36
CGRRF1-204ENST00000556216 MAGI2Q86UL8 1455 aa23.56■■□□□ 1.36
CGRRF1-204ENST00000556216 EHBP1L1Q8N3D4 1523 aa23.56■■□□□ 1.36
CGRRF1-204ENST00000556216 SAMD9LQ8IVG5 1584 aa23.56■■□□□ 1.36
CGRRF1-204ENST00000556216 CCNB3Q8WWL7 1395 aa23.55■■□□□ 1.36
CGRRF1-204ENST00000556216 ITSN2Q9NZM3 1697 aa23.55■■□□□ 1.36
CGRRF1-204ENST00000556216 BCORL1Q5H9F3 1711 aa23.55■■□□□ 1.36
CGRRF1-204ENST00000556216 KDM5CP41229 1560 aa23.55■■□□□ 1.36
CGRRF1-204ENST00000556216 ADAMTSL3P82987 1691 aa23.55■■□□□ 1.36
CGRRF1-204ENST00000556216 TIAM1Q13009 1591 aa23.54■■□□□ 1.36
CGRRF1-204ENST00000556216 CFDP1Q9UEE9 299 aaPredicted RBP23.53■■□□□ 1.36
CGRRF1-204ENST00000556216 HNRNPMP52272 730 aaKnown RBP eCLIP23.52■■□□□ 1.36
CGRRF1-204ENST00000556216 ZNF644Q9H582 1327 aaPredicted RBP23.51■■□□□ 1.35
CGRRF1-204ENST00000556216 MYT1LQ9UL68 1186 aa23.51■■□□□ 1.35
CGRRF1-204ENST00000556216 SYCP2Q9BX26 1530 aa23.5■■□□□ 1.35
CGRRF1-204ENST00000556216 KANK4Q5T7N3 995 aaPredicted RBP23.5■■□□□ 1.35
CGRRF1-204ENST00000556216 MADDQ8WXG6 1647 aa23.5■■□□□ 1.35
CGRRF1-204ENST00000556216 MLECQ14165 292 aa23.49■■□□□ 1.35
CGRRF1-204ENST00000556216 ATP10AO60312 1499 aa23.49■■□□□ 1.35
CGRRF1-204ENST00000556216 HECW2Q9P2P5 1572 aa23.49■■□□□ 1.35
CGRRF1-204ENST00000556216 NCOA2Q15596 1464 aa23.48■■□□□ 1.35
CGRRF1-204ENST00000556216 ABCA6Q8N139 1617 aa23.46■■□□□ 1.35
CGRRF1-204ENST00000556216 DIP2CQ9Y2E4 1556 aa23.46■■□□□ 1.35
CGRRF1-204ENST00000556216 PTPRMP28827 1452 aa23.46■■□□□ 1.35
CGRRF1-204ENST00000556216 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
CGRRF1-204ENST00000556216 MLH3Q9UHC1 1453 aa23.46■■□□□ 1.35
CGRRF1-204ENST00000556216 SUPT6HQ7KZ85 1726 aaKnown RBP23.45■■□□□ 1.35
CGRRF1-204ENST00000556216 C9orf84Q5VXU9 1444 aa23.45■■□□□ 1.35
CGRRF1-204ENST00000556216 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
CGRRF1-204ENST00000556216 RIMS1Q86UR5 1692 aaKnown RBP23.42■■□□□ 1.34
CGRRF1-204ENST00000556216 KIAA1107Q9UPP5 1409 aa23.41■■□□□ 1.34
CGRRF1-204ENST00000556216 PLPPR3Q6T4P5 718 aa23.4■■□□□ 1.34
CGRRF1-204ENST00000556216 MAP3K1Q13233 1512 aa23.38■■□□□ 1.33
CGRRF1-204ENST00000556216 PLEKHH2Q8IVE3 1493 aa23.37■■□□□ 1.33
CGRRF1-204ENST00000556216 MBD5Q9P267 1494 aa23.37■■□□□ 1.33
CGRRF1-204ENST00000556216 SPAG9O60271 1321 aaKnown RBP23.37■■□□□ 1.33
CGRRF1-204ENST00000556216 FER1L4A9Z1Z3 1794 aa23.35■■□□□ 1.33
CGRRF1-204ENST00000556216 REREQ9P2R6 1566 aa23.33■■□□□ 1.33
CGRRF1-204ENST00000556216 ATP7AQ04656 1500 aa23.33■■□□□ 1.33
CGRRF1-204ENST00000556216 CAMSAP2Q08AD1 1489 aa23.32■■□□□ 1.32
CGRRF1-204ENST00000556216 INO80Q9ULG1 1556 aaPredicted RBP23.32■■□□□ 1.32
CGRRF1-204ENST00000556216 APLP2Q06481 763 aa23.29■■□□□ 1.32
CGRRF1-204ENST00000556216 CEBPAP49715 358 aaPredicted RBP23.28■■□□□ 1.32
CGRRF1-204ENST00000556216 AGLP35573 1532 aa23.26■■□□□ 1.31
CGRRF1-204ENST00000556216 MYOM3Q5VTT5 1437 aa23.24■■□□□ 1.31
CGRRF1-204ENST00000556216 CCDC141Q6ZP82 1450 aa23.23■■□□□ 1.31
CGRRF1-204ENST00000556216 A2MP01023 1474 aa23.22■■□□□ 1.31
CGRRF1-204ENST00000556216 PLXNC1O60486 1568 aa23.21■■□□□ 1.31
CGRRF1-204ENST00000556216 LMTK3Q96Q04 1460 aa23.19■■□□□ 1.3
CGRRF1-204ENST00000556216 RTEL1-TNFRSF6BF6WH68 1400 aa23.18■■□□□ 1.3
CGRRF1-204ENST00000556216 ARHGEF5Q12774 1597 aa23.18■■□□□ 1.3
CGRRF1-204ENST00000556216 ADGBQ8N7X0 1667 aa23.18■■□□□ 1.3
CGRRF1-204ENST00000556216 MIA2Q96PC5 1412 aa23.17■■□□□ 1.3
CGRRF1-204ENST00000556216 RSPH4AQ5TD94 716 aa23.16■■□□□ 1.3
CGRRF1-204ENST00000556216 HSPA2P54652 639 aa23.15■■□□□ 1.3
CGRRF1-204ENST00000556216 GGT6Q6P531 493 aa23.15■■□□□ 1.3
CGRRF1-204ENST00000556216 C3P01024 1663 aa23.14■■□□□ 1.3
CGRRF1-204ENST00000556216 TSPY4P0CV99 314 aa23.13■■□□□ 1.29
CGRRF1-204ENST00000556216 TSPY10P0CW01 314 aa23.13■■□□□ 1.29
CGRRF1-204ENST00000556216 ESF1Q9H501 851 aaKnown RBP23.13■■□□□ 1.29
CGRRF1-204ENST00000556216 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
CGRRF1-204ENST00000556216 PTPN23Q9H3S7 1636 aa23.11■■□□□ 1.29
CGRRF1-204ENST00000556216 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
CGRRF1-204ENST00000556216 FGD6Q6ZV73 1430 aa23.08■■□□□ 1.29
CGRRF1-204ENST00000556216 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
CGRRF1-204ENST00000556216 KIF3BO15066 747 aa23.08■■□□□ 1.28
CGRRF1-204ENST00000556216 MAST1Q9Y2H9 1570 aa23.06■■□□□ 1.28
CGRRF1-204ENST00000556216 ZMYM3Q14202 1370 aa23.06■■□□□ 1.28
CGRRF1-204ENST00000556216 ABCC5O15440 1437 aa23.05■■□□□ 1.28
CGRRF1-204ENST00000556216 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
CGRRF1-204ENST00000556216 PREX1Q8TCU6 1659 aa23.04■■□□□ 1.28
CGRRF1-204ENST00000556216 SETD1BQ9UPS6 1966 aaKnown RBP23.04■■□□□ 1.28
CGRRF1-204ENST00000556216 TCOF1Q13428 1488 aaKnown RBP23.03■■□□□ 1.28
CGRRF1-204ENST00000556216 MROH2AA6NES4 1674 aa23.02■■□□□ 1.28
CGRRF1-204ENST00000556216 CROCC2H7BZ55 1655 aa23.01■■□□□ 1.27
CGRRF1-204ENST00000556216 DAPK1P53355 1430 aa23■■□□□ 1.27
CGRRF1-204ENST00000556216 DNMT1P26358 1616 aaKnown RBP22.99■■□□□ 1.27
CGRRF1-204ENST00000556216 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
CGRRF1-204ENST00000556216 UHRF1BP1Q6BDS2 1440 aa22.97■■□□□ 1.27
CGRRF1-204ENST00000556216 RRP7BPQ9NSQ0 103 aa22.97■■□□□ 1.27
CGRRF1-204ENST00000556216 FAM50AQ14320 339 aaKnown RBP22.96■■□□□ 1.27
CGRRF1-204ENST00000556216 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms