RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 TEX14Q8IWB6 1497 aa11.18□□□□□ -0.62
PSEN1-216ENST00000556066 SAMD9Q5K651 1589 aa11.16□□□□□ -0.62
PSEN1-216ENST00000556066 HAX1O00165 279 aa11.16□□□□□ -0.62
PSEN1-216ENST00000556066 CFAP43Q8NDM7 1665 aa11.16□□□□□ -0.62
PSEN1-216ENST00000556066 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
PSEN1-216ENST00000556066 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
PSEN1-216ENST00000556066 RAPGEF6Q8TEU7 1601 aa11.14□□□□□ -0.63
PSEN1-216ENST00000556066 CD109Q6YHK3 1445 aa11.14□□□□□ -0.63
PSEN1-216ENST00000556066 ATP10BO94823 1461 aa11.12□□□□□ -0.63
PSEN1-216ENST00000556066 KIF21BO75037 1637 aa11.12□□□□□ -0.63
PSEN1-216ENST00000556066 FHOD3Q2V2M9 1422 aa11.11□□□□□ -0.63
PSEN1-216ENST00000556066 MAGI3Q5TCQ9 1506 aa11.1□□□□□ -0.63
PSEN1-216ENST00000556066 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
PSEN1-216ENST00000556066 ABCA9Q8IUA7 1624 aa11.07□□□□□ -0.64
PSEN1-216ENST00000556066 ATF5Q9Y2D1 282 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-216ENST00000556066 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
PSEN1-216ENST00000556066 EFCAB5A4FU69 1503 aa11.06□□□□□ -0.64
PSEN1-216ENST00000556066 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
PSEN1-216ENST00000556066 FBXO41Q8TF61 875 aa11.05□□□□□ -0.64
PSEN1-216ENST00000556066 PLEKHD1A6NEE1 506 aa11.03□□□□□ -0.64
PSEN1-216ENST00000556066 ATP1B4Q9UN42 357 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-216ENST00000556066 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
PSEN1-216ENST00000556066 ARAP3Q8WWN8 1544 aa11.02□□□□□ -0.65
PSEN1-216ENST00000556066 CDK13Q14004 1512 aaKnown RBP11□□□□□ -0.65
PSEN1-216ENST00000556066 RAPGEF3O95398 923 aa11□□□□□ -0.65
PSEN1-216ENST00000556066 PHLDB1Q86UU1 1377 aa10.99□□□□□ -0.65
PSEN1-216ENST00000556066 NEO1Q92859 1461 aa10.99□□□□□ -0.65
PSEN1-216ENST00000556066 ARHGAP35Q9NRY4 1499 aa10.98□□□□□ -0.65
PSEN1-216ENST00000556066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.97□□□□□ -0.65
PSEN1-216ENST00000556066 TTC37Q6PGP7 1564 aa10.97□□□□□ -0.65
PSEN1-216ENST00000556066 HECW1Q76N89 1606 aa10.97□□□□□ -0.65
PSEN1-216ENST00000556066 CFAP74Q9C0B2 1584 aa10.96□□□□□ -0.65
PSEN1-216ENST00000556066 FMN1Q68DA7 1419 aa10.96□□□□□ -0.65
PSEN1-216ENST00000556066 FRMPD1Q5SYB0 1578 aa10.95□□□□□ -0.66
PSEN1-216ENST00000556066 FANCAO15360 1455 aa10.95□□□□□ -0.66
PSEN1-216ENST00000556066 PTPRMP28827 1452 aa10.95□□□□□ -0.66
PSEN1-216ENST00000556066 RICTORQ6R327 1708 aa10.94□□□□□ -0.66
PSEN1-216ENST00000556066 AKNAQ7Z591 1439 aa10.93□□□□□ -0.66
PSEN1-216ENST00000556066 LRRIQ1Q96JM4 1722 aa10.93□□□□□ -0.66
PSEN1-216ENST00000556066 ARID4BQ4LE39 1312 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-216ENST00000556066 SPDYE2BA6NHP3 402 aa10.93□□□□□ -0.66
PSEN1-216ENST00000556066 SPDYE6P0CI01 402 aa10.93□□□□□ -0.66
PSEN1-216ENST00000556066 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
PSEN1-216ENST00000556066 DENND4BO75064 1496 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-216ENST00000556066 MYO5CQ9NQX4 1742 aa10.92□□□□□ -0.66
PSEN1-216ENST00000556066 CDK11AQ9UQ88 783 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-216ENST00000556066 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
PSEN1-216ENST00000556066 KIF14Q15058 1648 aa10.91□□□□□ -0.66
PSEN1-216ENST00000556066 ARHGEF40Q8TER5 1519 aa10.89□□□□□ -0.67
PSEN1-216ENST00000556066 BCORL1Q5H9F3 1711 aa10.89□□□□□ -0.67
PSEN1-216ENST00000556066 LMTK3Q96Q04 1460 aa10.88□□□□□ -0.67
PSEN1-216ENST00000556066 PLCH2O75038 1416 aa10.88□□□□□ -0.67
PSEN1-216ENST00000556066 PCF11O94913 1555 aaKnown RBP10.88□□□□□ -0.67
PSEN1-216ENST00000556066 CLIP1P30622 1438 aa10.88□□□□□ -0.67
PSEN1-216ENST00000556066 MADDQ8WXG6 1647 aa10.87□□□□□ -0.67
PSEN1-216ENST00000556066 TROQ12816 1431 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-216ENST00000556066 SCAPERQ9BY12 1400 aa10.87□□□□□ -0.67
PSEN1-216ENST00000556066 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
PSEN1-216ENST00000556066 EFCAB2Q5VUJ9 269 aa10.87□□□□□ -0.67
PSEN1-216ENST00000556066 ARHGAP5Q13017 1502 aa10.86□□□□□ -0.67
PSEN1-216ENST00000556066 ZMYM4Q5VZL5 1548 aa10.86□□□□□ -0.67
PSEN1-216ENST00000556066 ZFYVE16Q7Z3T8 1539 aa10.86□□□□□ -0.67
PSEN1-216ENST00000556066 SPDYE1Q8NFV5 336 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-216ENST00000556066 RIMS1Q86UR5 1692 aaKnown RBP10.85□□□□□ -0.67
PSEN1-216ENST00000556066 YEATS2Q9ULM3 1422 aa10.85□□□□□ -0.67
PSEN1-216ENST00000556066 HSPA2P54652 639 aa10.85□□□□□ -0.67
PSEN1-216ENST00000556066 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
PSEN1-216ENST00000556066 POGZQ7Z3K3 1410 aa10.84□□□□□ -0.67
PSEN1-216ENST00000556066 CASKIN1Q8WXD9 1431 aa10.84□□□□□ -0.67
PSEN1-216ENST00000556066 CCDC18Q5T9S5 1454 aa10.84□□□□□ -0.67
PSEN1-216ENST00000556066 SIGLEC1Q9BZZ2 1709 aa10.84□□□□□ -0.67
PSEN1-216ENST00000556066 CDC42BPBQ9Y5S2 1711 aa10.84□□□□□ -0.67
PSEN1-216ENST00000556066 MAGI2Q86UL8 1455 aa10.83□□□□□ -0.68
PSEN1-216ENST00000556066 MLECQ14165 292 aa10.83□□□□□ -0.68
PSEN1-216ENST00000556066 MYT1LQ9UL68 1186 aa10.83□□□□□ -0.68
PSEN1-216ENST00000556066 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
PSEN1-216ENST00000556066 FYCO1Q9BQS8 1478 aa10.81□□□□□ -0.68
PSEN1-216ENST00000556066 PREX2Q70Z35 1606 aa10.81□□□□□ -0.68
PSEN1-216ENST00000556066 FER1L4A9Z1Z3 1794 aa10.81□□□□□ -0.68
PSEN1-216ENST00000556066 CERKQ8TCT0 537 aa10.81□□□□□ -0.68
PSEN1-216ENST00000556066 CDC42BPAQ5VT25 1732 aa10.81□□□□□ -0.68
PSEN1-216ENST00000556066 AFAP1Q8N556 730 aa10.8□□□□□ -0.68
PSEN1-216ENST00000556066 ZNF518AQ6AHZ1 1483 aa10.8□□□□□ -0.68
PSEN1-216ENST00000556066 ATP10AO60312 1499 aa10.79□□□□□ -0.68
PSEN1-216ENST00000556066 ILDR2Q71H61 639 aa10.78□□□□□ -0.68
PSEN1-216ENST00000556066 C9orf84Q5VXU9 1444 aa10.77□□□□□ -0.68
PSEN1-216ENST00000556066 ITSN2Q9NZM3 1697 aa10.77□□□□□ -0.69
PSEN1-216ENST00000556066 ZNF777Q9ULD5 760 aaPredicted RBP10.77□□□□□ -0.69
PSEN1-216ENST00000556066 KDM5CP41229 1560 aa10.77□□□□□ -0.69
PSEN1-216ENST00000556066 ABCC1P33527 1531 aa10.76□□□□□ -0.69
PSEN1-216ENST00000556066 EVX2Q03828 476 aa10.76□□□□□ -0.69
PSEN1-216ENST00000556066 ZNF692Q9BU19 519 aaPredicted RBP10.75□□□□□ -0.69
PSEN1-216ENST00000556066 TRAPPC8Q9Y2L5 1435 aa10.75□□□□□ -0.69
PSEN1-216ENST00000556066 ARHGEF12Q9NZN5 1544 aa10.74□□□□□ -0.69
PSEN1-216ENST00000556066 DIP2CQ9Y2E4 1556 aa10.74□□□□□ -0.69
PSEN1-216ENST00000556066 ABCA6Q8N139 1617 aa10.74□□□□□ -0.69
PSEN1-216ENST00000556066 MTUS2Q5JR59 1369 aa10.73□□□□□ -0.69
PSEN1-216ENST00000556066 CEP162Q5TB80 1403 aa10.73□□□□□ -0.69
PSEN1-216ENST00000556066 SAMD9LQ8IVG5 1584 aa10.73□□□□□ -0.69
PSEN1-216ENST00000556066 KIDINS220Q9ULH0 1771 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms