RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 MAGI2Q86UL8 1455 aa23.94■■□□□ 1.42
CHMP4BP1-201ENST00000556017 POGZQ7Z3K3 1410 aa23.94■■□□□ 1.42
CHMP4BP1-201ENST00000556017 MYO5CQ9NQX4 1742 aa23.94■■□□□ 1.42
CHMP4BP1-201ENST00000556017 SCAPERQ9BY12 1400 aa23.93■■□□□ 1.42
CHMP4BP1-201ENST00000556017 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
CHMP4BP1-201ENST00000556017 TROQ12816 1431 aaPredicted RBP23.86■■□□□ 1.41
CHMP4BP1-201ENST00000556017 FER1L4A9Z1Z3 1794 aa23.86■■□□□ 1.41
CHMP4BP1-201ENST00000556017 CDC42BPBQ9Y5S2 1711 aa23.84■■□□□ 1.41
CHMP4BP1-201ENST00000556017 ARHGEF12Q9NZN5 1544 aa23.84■■□□□ 1.41
CHMP4BP1-201ENST00000556017 KDM5CP41229 1560 aa23.82■■□□□ 1.4
CHMP4BP1-201ENST00000556017 ATP10AO60312 1499 aa23.82■■□□□ 1.4
CHMP4BP1-201ENST00000556017 ATP1B4Q9UN42 357 aaPredicted RBP23.82■■□□□ 1.4
CHMP4BP1-201ENST00000556017 EFCAB2Q5VUJ9 269 aa23.81■■□□□ 1.4
CHMP4BP1-201ENST00000556017 C9orf84Q5VXU9 1444 aa23.78■■□□□ 1.4
CHMP4BP1-201ENST00000556017 HSPA2P54652 639 aa23.78■■□□□ 1.4
CHMP4BP1-201ENST00000556017 FBXO41Q8TF61 875 aa23.78■■□□□ 1.4
CHMP4BP1-201ENST00000556017 ZNF518AQ6AHZ1 1483 aa23.77■■□□□ 1.4
CHMP4BP1-201ENST00000556017 MLECQ14165 292 aa23.77■■□□□ 1.4
CHMP4BP1-201ENST00000556017 CDK11AQ9UQ88 783 aaPredicted RBP23.77■■□□□ 1.4
CHMP4BP1-201ENST00000556017 ARHGAP5Q13017 1502 aa23.77■■□□□ 1.4
CHMP4BP1-201ENST00000556017 DIP2CQ9Y2E4 1556 aa23.75■■□□□ 1.39
CHMP4BP1-201ENST00000556017 PREX2Q70Z35 1606 aa23.75■■□□□ 1.39
CHMP4BP1-201ENST00000556017 AFAP1Q8N556 730 aa23.75■■□□□ 1.39
CHMP4BP1-201ENST00000556017 CASKIN1Q8WXD9 1431 aa23.74■■□□□ 1.39
CHMP4BP1-201ENST00000556017 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
CHMP4BP1-201ENST00000556017 PLPPR3Q6T4P5 718 aa23.72■■□□□ 1.39
CHMP4BP1-201ENST00000556017 CLIP1P30622 1438 aa23.72■■□□□ 1.39
CHMP4BP1-201ENST00000556017 CDC42BPAQ5VT25 1732 aa23.71■■□□□ 1.39
CHMP4BP1-201ENST00000556017 REREQ9P2R6 1566 aa23.71■■□□□ 1.39
CHMP4BP1-201ENST00000556017 ABCC1P33527 1531 aa23.7■■□□□ 1.38
CHMP4BP1-201ENST00000556017 TRAPPC8Q9Y2L5 1435 aa23.69■■□□□ 1.38
CHMP4BP1-201ENST00000556017 PREX1Q8TCU6 1659 aa23.69■■□□□ 1.38
CHMP4BP1-201ENST00000556017 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
CHMP4BP1-201ENST00000556017 MLH3Q9UHC1 1453 aa23.68■■□□□ 1.38
CHMP4BP1-201ENST00000556017 CCDC18Q5T9S5 1454 aa23.68■■□□□ 1.38
CHMP4BP1-201ENST00000556017 CEBPAP49715 358 aaPredicted RBP23.66■■□□□ 1.38
CHMP4BP1-201ENST00000556017 KIDINS220Q9ULH0 1771 aa23.65■■□□□ 1.38
CHMP4BP1-201ENST00000556017 STRCQ7RTU9 1775 aa23.63■■□□□ 1.37
CHMP4BP1-201ENST00000556017 FYCO1Q9BQS8 1478 aa23.62■■□□□ 1.37
CHMP4BP1-201ENST00000556017 C3P01024 1663 aa23.61■■□□□ 1.37
CHMP4BP1-201ENST00000556017 AGLP35573 1532 aa23.61■■□□□ 1.37
CHMP4BP1-201ENST00000556017 SETD1BQ9UPS6 1966 aaKnown RBP23.6■■□□□ 1.37
CHMP4BP1-201ENST00000556017 SAMD9LQ8IVG5 1584 aa23.59■■□□□ 1.37
CHMP4BP1-201ENST00000556017 GPATCH8Q9UKJ3 1502 aaKnown RBP23.56■■□□□ 1.36
CHMP4BP1-201ENST00000556017 SYCP2Q9BX26 1530 aa23.52■■□□□ 1.36
CHMP4BP1-201ENST00000556017 CERKQ8TCT0 537 aa23.5■■□□□ 1.35
CHMP4BP1-201ENST00000556017 MYT1LQ9UL68 1186 aa23.49■■□□□ 1.35
CHMP4BP1-201ENST00000556017 UHRF1BP1Q6BDS2 1440 aa23.49■■□□□ 1.35
CHMP4BP1-201ENST00000556017 INO80Q9ULG1 1556 aaPredicted RBP23.46■■□□□ 1.35
CHMP4BP1-201ENST00000556017 PLXNC1O60486 1568 aa23.44■■□□□ 1.34
CHMP4BP1-201ENST00000556017 MROH2AA6NES4 1674 aa23.44■■□□□ 1.34
CHMP4BP1-201ENST00000556017 SUPT6HQ7KZ85 1726 aaKnown RBP23.43■■□□□ 1.34
CHMP4BP1-201ENST00000556017 HNRNPMP52272 730 aaKnown RBP eCLIP23.43■■□□□ 1.34
CHMP4BP1-201ENST00000556017 ATP7AQ04656 1500 aa23.43■■□□□ 1.34
CHMP4BP1-201ENST00000556017 KIAA1107Q9UPP5 1409 aa23.42■■□□□ 1.34
CHMP4BP1-201ENST00000556017 ZNF777Q9ULD5 760 aaPredicted RBP23.42■■□□□ 1.34
CHMP4BP1-201ENST00000556017 CNTLNQ9NXG0 1405 aa23.41■■□□□ 1.34
CHMP4BP1-201ENST00000556017 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
CHMP4BP1-201ENST00000556017 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
CHMP4BP1-201ENST00000556017 PTPRTO14522 1441 aa23.37■■□□□ 1.33
CHMP4BP1-201ENST00000556017 CLTCQ00610 1675 aaKnown RBP23.36■■□□□ 1.33
CHMP4BP1-201ENST00000556017 PLEKHH2Q8IVE3 1493 aa23.36■■□□□ 1.33
CHMP4BP1-201ENST00000556017 LTBP4Q8N2S1 1624 aa23.35■■□□□ 1.33
CHMP4BP1-201ENST00000556017 CFDP1Q9UEE9 299 aaPredicted RBP23.35■■□□□ 1.33
CHMP4BP1-201ENST00000556017 CCNB3Q8WWL7 1395 aa23.35■■□□□ 1.33
CHMP4BP1-201ENST00000556017 MBD5Q9P267 1494 aa23.35■■□□□ 1.33
CHMP4BP1-201ENST00000556017 NPATQ14207 1427 aa23.34■■□□□ 1.33
CHMP4BP1-201ENST00000556017 NCOA1Q15788 1441 aa23.34■■□□□ 1.33
CHMP4BP1-201ENST00000556017 DMRT2Q9Y5R5 561 aa23.34■■□□□ 1.33
CHMP4BP1-201ENST00000556017 A2MP01023 1474 aa23.34■■□□□ 1.33
CHMP4BP1-201ENST00000556017 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.33
CHMP4BP1-201ENST00000556017 ZMYM3Q14202 1370 aa23.33■■□□□ 1.33
CHMP4BP1-201ENST00000556017 MTUS2Q5JR59 1369 aa23.32■■□□□ 1.32
CHMP4BP1-201ENST00000556017 ADGBQ8N7X0 1667 aa23.32■■□□□ 1.32
CHMP4BP1-201ENST00000556017 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
CHMP4BP1-201ENST00000556017 EHBP1L1Q8N3D4 1523 aa23.31■■□□□ 1.32
CHMP4BP1-201ENST00000556017 CAMSAP1Q5T5Y3 1602 aa23.3■■□□□ 1.32
CHMP4BP1-201ENST00000556017 ZNF142P52746 1687 aaPredicted RBP23.29■■□□□ 1.32
CHMP4BP1-201ENST00000556017 CEP162Q5TB80 1403 aa23.28■■□□□ 1.32
CHMP4BP1-201ENST00000556017 PTPRKQ15262 1439 aa23.27■■□□□ 1.32
CHMP4BP1-201ENST00000556017 MYO3AQ8NEV4 1616 aa23.27■■□□□ 1.32
CHMP4BP1-201ENST00000556017 RTEL1-TNFRSF6BF6WH68 1400 aa23.22■■□□□ 1.31
CHMP4BP1-201ENST00000556017 CEP170BQ9Y4F5 1589 aaPredicted RBP23.22■■□□□ 1.31
CHMP4BP1-201ENST00000556017 GGT6Q6P531 493 aa23.2■■□□□ 1.3
CHMP4BP1-201ENST00000556017 NCOA2Q15596 1464 aa23.19■■□□□ 1.3
CHMP4BP1-201ENST00000556017 PLA2R1Q13018 1463 aa23.18■■□□□ 1.3
CHMP4BP1-201ENST00000556017 TCOF1Q13428 1488 aaKnown RBP23.18■■□□□ 1.3
CHMP4BP1-201ENST00000556017 NCKAP5LQ9HCH0 1330 aa23.18■■□□□ 1.3
CHMP4BP1-201ENST00000556017 DHX29Q7Z478 1369 aaKnown RBP23.17■■□□□ 1.3
CHMP4BP1-201ENST00000556017 CAMSAP2Q08AD1 1489 aa23.17■■□□□ 1.3
CHMP4BP1-201ENST00000556017 IQSEC2Q5JU85 1478 aa23.17■■□□□ 1.3
CHMP4BP1-201ENST00000556017 PPP6R1Q9UPN7 881 aa23.15■■□□□ 1.3
CHMP4BP1-201ENST00000556017 CCDC141Q6ZP82 1450 aa23.14■■□□□ 1.29
CHMP4BP1-201ENST00000556017 DNMT1P26358 1616 aaKnown RBP23.14■■□□□ 1.29
CHMP4BP1-201ENST00000556017 A2ML1A8K2U0 1454 aa23.11■■□□□ 1.29
CHMP4BP1-201ENST00000556017 ZNF335Q9H4Z2 1342 aaPredicted RBP23.1■■□□□ 1.29
CHMP4BP1-201ENST00000556017 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
CHMP4BP1-201ENST00000556017 NEURL4Q96JN8 1562 aa23.07■■□□□ 1.28
CHMP4BP1-201ENST00000556017 PKD2Q13563 968 aa23.07■■□□□ 1.28
CHMP4BP1-201ENST00000556017 FBXO31Q5XUX0 539 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms