RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 FANCAO15360 1455 aa19.05■□□□□ 0.64
SHMT2-221ENST00000555773 NEO1Q92859 1461 aa19.04■□□□□ 0.64
SHMT2-221ENST00000555773 RSPH4AQ5TD94 716 aa19.04■□□□□ 0.64
SHMT2-221ENST00000555773 KIF13AQ9H1H9 1805 aa19.04■□□□□ 0.64
SHMT2-221ENST00000555773 ZNF644Q9H582 1327 aaPredicted RBP19.03■□□□□ 0.64
SHMT2-221ENST00000555773 AKNAQ7Z591 1439 aa19.03■□□□□ 0.64
SHMT2-221ENST00000555773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.02■□□□□ 0.64
SHMT2-221ENST00000555773 RRBP1Q9P2E9 1410 aaKnown RBP19.01■□□□□ 0.63
SHMT2-221ENST00000555773 KIAA1107Q9UPP5 1409 aa19.01■□□□□ 0.63
SHMT2-221ENST00000555773 PREX2Q70Z35 1606 aa19.01■□□□□ 0.63
SHMT2-221ENST00000555773 MYO5CQ9NQX4 1742 aa19.01■□□□□ 0.63
SHMT2-221ENST00000555773 FAM50AQ14320 339 aaKnown RBP19.01■□□□□ 0.63
SHMT2-221ENST00000555773 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
SHMT2-221ENST00000555773 ITSN2Q9NZM3 1697 aa19■□□□□ 0.63
SHMT2-221ENST00000555773 CDC42BPAQ5VT25 1732 aa19■□□□□ 0.63
SHMT2-221ENST00000555773 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
SHMT2-221ENST00000555773 HNRNPMP52272 730 aaKnown RBP eCLIP18.98■□□□□ 0.63
SHMT2-221ENST00000555773 CDC42BPBQ9Y5S2 1711 aa18.97■□□□□ 0.63
SHMT2-221ENST00000555773 SCAPERQ9BY12 1400 aa18.97■□□□□ 0.63
SHMT2-221ENST00000555773 ADGRL1O94910 1474 aa18.96■□□□□ 0.63
SHMT2-221ENST00000555773 CFAP74Q9C0B2 1584 aa18.95■□□□□ 0.62
SHMT2-221ENST00000555773 CAMSAP2Q08AD1 1489 aa18.95■□□□□ 0.62
SHMT2-221ENST00000555773 PTPN23Q9H3S7 1636 aa18.93■□□□□ 0.62
SHMT2-221ENST00000555773 MBD5Q9P267 1494 aa18.93■□□□□ 0.62
SHMT2-221ENST00000555773 TSPY4P0CV99 314 aa18.93■□□□□ 0.62
SHMT2-221ENST00000555773 TSPY10P0CW01 314 aa18.93■□□□□ 0.62
SHMT2-221ENST00000555773 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
SHMT2-221ENST00000555773 PPRC1Q5VV67 1664 aaKnown RBP18.92■□□□□ 0.62
SHMT2-221ENST00000555773 DENND4BO75064 1496 aaPredicted RBP18.92■□□□□ 0.62
SHMT2-221ENST00000555773 AFAP1Q8N556 730 aa18.92■□□□□ 0.62
SHMT2-221ENST00000555773 SAMD9LQ8IVG5 1584 aa18.92■□□□□ 0.62
SHMT2-221ENST00000555773 TSPOAP1O95153 1857 aa18.92■□□□□ 0.62
SHMT2-221ENST00000555773 ARHGEF12Q9NZN5 1544 aa18.9■□□□□ 0.62
SHMT2-221ENST00000555773 RAPGEF3O95398 923 aa18.9■□□□□ 0.62
SHMT2-221ENST00000555773 ABCC1P33527 1531 aa18.9■□□□□ 0.62
SHMT2-221ENST00000555773 TRAPPC8Q9Y2L5 1435 aa18.89■□□□□ 0.61
SHMT2-221ENST00000555773 ABCC5O15440 1437 aa18.87■□□□□ 0.61
SHMT2-221ENST00000555773 SYCP2Q9BX26 1530 aa18.87■□□□□ 0.61
SHMT2-221ENST00000555773 ZNF518AQ6AHZ1 1483 aa18.86■□□□□ 0.61
SHMT2-221ENST00000555773 CCDC141Q6ZP82 1450 aa18.86■□□□□ 0.61
SHMT2-221ENST00000555773 COL17A1Q9UMD9 1497 aaPredicted RBP18.86■□□□□ 0.61
SHMT2-221ENST00000555773 POGZQ7Z3K3 1410 aa18.86■□□□□ 0.61
SHMT2-221ENST00000555773 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
SHMT2-221ENST00000555773 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
SHMT2-221ENST00000555773 DAPK1P53355 1430 aa18.85■□□□□ 0.61
SHMT2-221ENST00000555773 ITGAEP38570 1179 aa18.85■□□□□ 0.61
SHMT2-221ENST00000555773 RTEL1-TNFRSF6BF6WH68 1400 aa18.83■□□□□ 0.6
SHMT2-221ENST00000555773 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
SHMT2-221ENST00000555773 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
SHMT2-221ENST00000555773 MLH3Q9UHC1 1453 aa18.79■□□□□ 0.6
SHMT2-221ENST00000555773 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
SHMT2-221ENST00000555773 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
SHMT2-221ENST00000555773 C9orf84Q5VXU9 1444 aa18.79■□□□□ 0.6
SHMT2-221ENST00000555773 DNMT1P26358 1616 aaKnown RBP18.78■□□□□ 0.6
SHMT2-221ENST00000555773 MAGI2Q86UL8 1455 aa18.78■□□□□ 0.6
SHMT2-221ENST00000555773 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
SHMT2-221ENST00000555773 ANKRD30AQ9BXX3 1397 aa18.78■□□□□ 0.6
SHMT2-221ENST00000555773 KDM5CP41229 1560 aa18.76■□□□□ 0.59
SHMT2-221ENST00000555773 NCOA1Q15788 1441 aa18.75■□□□□ 0.59
SHMT2-221ENST00000555773 KDM6BO15054 1643 aa18.75■□□□□ 0.59
SHMT2-221ENST00000555773 RRP7BPQ9NSQ0 103 aa18.74■□□□□ 0.59
SHMT2-221ENST00000555773 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
SHMT2-221ENST00000555773 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
SHMT2-221ENST00000555773 ADGRL2O95490 1459 aa18.72■□□□□ 0.59
SHMT2-221ENST00000555773 RICTORQ6R327 1708 aa18.72■□□□□ 0.59
SHMT2-221ENST00000555773 FRMPD1Q5SYB0 1578 aa18.72■□□□□ 0.59
SHMT2-221ENST00000555773 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
SHMT2-221ENST00000555773 ATP7AQ04656 1500 aa18.69■□□□□ 0.58
SHMT2-221ENST00000555773 KIF15Q9NS87 1388 aa18.69■□□□□ 0.58
SHMT2-221ENST00000555773 ZFYVE16Q7Z3T8 1539 aa18.69■□□□□ 0.58
SHMT2-221ENST00000555773 DHX29Q7Z478 1369 aaKnown RBP18.68■□□□□ 0.58
SHMT2-221ENST00000555773 ATP10AO60312 1499 aa18.68■□□□□ 0.58
SHMT2-221ENST00000555773 HECW2Q9P2P5 1572 aa18.68■□□□□ 0.58
SHMT2-221ENST00000555773 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
SHMT2-221ENST00000555773 INO80Q9ULG1 1556 aaPredicted RBP18.67■□□□□ 0.58
SHMT2-221ENST00000555773 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
SHMT2-221ENST00000555773 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
SHMT2-221ENST00000555773 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
SHMT2-221ENST00000555773 NAIPQ13075 1403 aa18.65■□□□□ 0.58
SHMT2-221ENST00000555773 KIDINS220Q9ULH0 1771 aa18.64■□□□□ 0.57
SHMT2-221ENST00000555773 HRCP23327 699 aa18.64■□□□□ 0.57
SHMT2-221ENST00000555773 A2MP01023 1474 aa18.64■□□□□ 0.57
SHMT2-221ENST00000555773 ANKRD50Q9ULJ7 1429 aa18.63■□□□□ 0.57
SHMT2-221ENST00000555773 DUOX2Q9NRD8 1548 aa18.63■□□□□ 0.57
SHMT2-221ENST00000555773 PLXNC1O60486 1568 aa18.63■□□□□ 0.57
SHMT2-221ENST00000555773 SETD5Q9C0A6 1442 aa18.62■□□□□ 0.57
SHMT2-221ENST00000555773 ERBINQ96RT1 1412 aa18.6■□□□□ 0.57
SHMT2-221ENST00000555773 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
SHMT2-221ENST00000555773 KIF3BO15066 747 aa18.59■□□□□ 0.57
SHMT2-221ENST00000555773 ARHGEF40Q8TER5 1519 aa18.59■□□□□ 0.57
SHMT2-221ENST00000555773 ADGBQ8N7X0 1667 aa18.58■□□□□ 0.57
SHMT2-221ENST00000555773 ABCA6Q8N139 1617 aa18.57■□□□□ 0.56
SHMT2-221ENST00000555773 REREQ9P2R6 1566 aa18.57■□□□□ 0.56
SHMT2-221ENST00000555773 ARID4BQ4LE39 1312 aaPredicted RBP18.56■□□□□ 0.56
SHMT2-221ENST00000555773 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
SHMT2-221ENST00000555773 AGLP35573 1532 aa18.55■□□□□ 0.56
SHMT2-221ENST00000555773 RAB3GAP2Q9H2M9 1393 aa18.55■□□□□ 0.56
SHMT2-221ENST00000555773 GGT6Q6P531 493 aa18.53■□□□□ 0.56
SHMT2-221ENST00000555773 TRIM52Q96A61 297 aa18.5■□□□□ 0.55
SHMT2-221ENST00000555773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms