RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 RNF166Q96A37 237 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-232ENST00000555381 ERBB3P21860 1342 aa9.8□□□□□ -0.84
ATXN3-232ENST00000555381 HOXB1P14653 301 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-232ENST00000555381 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
ATXN3-232ENST00000555381 ERCC6Q03468 1493 aa9.78□□□□□ -0.84
ATXN3-232ENST00000555381 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
ATXN3-232ENST00000555381 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
ATXN3-232ENST00000555381 NCAPD3P42695 1498 aa9.74□□□□□ -0.85
ATXN3-232ENST00000555381 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
ATXN3-232ENST00000555381 PKD2Q13563 968 aa9.72□□□□□ -0.85
ATXN3-232ENST00000555381 DOK7Q18PE1 504 aa9.72□□□□□ -0.85
ATXN3-232ENST00000555381 MYT1LQ9UL68 1186 aa9.72□□□□□ -0.85
ATXN3-232ENST00000555381 RIOK3O14730 519 aaKnown RBP9.67□□□□□ -0.86
ATXN3-232ENST00000555381 TMEM92Q6UXU6 159 aa9.65□□□□□ -0.86
ATXN3-232ENST00000555381 ATAD2BQ9ULI0 1458 aa9.65□□□□□ -0.87
ATXN3-232ENST00000555381 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-232ENST00000555381 RIMBP2O15034 1052 aa9.64□□□□□ -0.87
ATXN3-232ENST00000555381 MICALL2Q8IY33 904 aa9.64□□□□□ -0.87
ATXN3-232ENST00000555381 RNF25Q96BH1 459 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-232ENST00000555381 ZFP91Q96JP5 570 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-232ENST00000555381 ZNF687Q8N1G0 1237 aa9.63□□□□□ -0.87
ATXN3-232ENST00000555381 VGFO15240 615 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-232ENST00000555381 SOX12O15370 315 aa9.62□□□□□ -0.87
ATXN3-232ENST00000555381 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-232ENST00000555381 PHF8Q9UPP1 1060 aa9.61□□□□□ -0.87
ATXN3-232ENST00000555381 MS4A4AQ96JQ5 239 aa9.6□□□□□ -0.87
ATXN3-232ENST00000555381 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
ATXN3-232ENST00000555381 NESP48681 1621 aa9.6□□□□□ -0.87
ATXN3-232ENST00000555381 PTGER2P43116 358 aa9.59□□□□□ -0.87
ATXN3-232ENST00000555381 GPR153Q6NV75 609 aa9.59□□□□□ -0.87
ATXN3-232ENST00000555381 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
ATXN3-232ENST00000555381 AMER1Q5JTC6 1135 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-232ENST00000555381 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
ATXN3-232ENST00000555381 RGL2O15211 777 aa9.56□□□□□ -0.88
ATXN3-232ENST00000555381 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
ATXN3-232ENST00000555381 ZSWIM6Q9HCJ5 1215 aa9.55□□□□□ -0.88
ATXN3-232ENST00000555381 HMGXB3Q12766 1538 aa9.55□□□□□ -0.88
ATXN3-232ENST00000555381 KHSRPQ92945 711 aaKnown RBP eCLIP9.54□□□□□ -0.88
ATXN3-232ENST00000555381 BCL11BQ9C0K0 894 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-232ENST00000555381 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
ATXN3-232ENST00000555381 NLRP6P59044 892 aa9.52□□□□□ -0.89
ATXN3-232ENST00000555381 BAZ1BQ9UIG0 1483 aaKnown RBP9.52□□□□□ -0.89
ATXN3-232ENST00000555381 TAOK2Q9UL54 1235 aa9.51□□□□□ -0.89
ATXN3-232ENST00000555381 STK24Q9Y6E0 443 aa9.51□□□□□ -0.89
ATXN3-232ENST00000555381 FBXO22Q8NEZ5 403 aa9.48□□□□□ -0.89
ATXN3-232ENST00000555381 THOC2Q8NI27 1593 aaKnown RBP9.47□□□□□ -0.89
ATXN3-232ENST00000555381 LAMC3Q9Y6N6 1575 aa9.47□□□□□ -0.89
ATXN3-232ENST00000555381 SMARCA4P51532 1647 aa9.47□□□□□ -0.89
ATXN3-232ENST00000555381 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-232ENST00000555381 LSM11P83369 360 aaKnown RBP eCLIP9.47□□□□□ -0.89
ATXN3-232ENST00000555381 CADPSQ9ULU8 1353 aa9.46□□□□□ -0.9
ATXN3-232ENST00000555381 STK25O00506 426 aa9.45□□□□□ -0.9
ATXN3-232ENST00000555381 MFRPQ9BY79 579 aa9.44□□□□□ -0.9
ATXN3-232ENST00000555381 BAZ1AQ9NRL2 1556 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-232ENST00000555381 PLA2G2EQ9NZK7 142 aa9.43□□□□□ -0.9
ATXN3-232ENST00000555381 AXIN2Q9Y2T1 843 aa9.42□□□□□ -0.9
ATXN3-232ENST00000555381 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
ATXN3-232ENST00000555381 POTEEQ6S8J3 1075 aa9.4□□□□□ -0.9
ATXN3-232ENST00000555381 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
ATXN3-232ENST00000555381 C2orf72A6NCS6 295 aa9.38□□□□□ -0.91
ATXN3-232ENST00000555381 NUDT7P0C024 238 aa9.38□□□□□ -0.91
ATXN3-232ENST00000555381 KIF3CO14782 793 aa9.36□□□□□ -0.91
ATXN3-232ENST00000555381 MROH2BQ7Z745 1585 aa9.35□□□□□ -0.91
ATXN3-232ENST00000555381 WDR62O43379 1518 aa9.35□□□□□ -0.91
ATXN3-232ENST00000555381 HS6ST3Q8IZP7 471 aa9.34□□□□□ -0.91
ATXN3-232ENST00000555381 LHX6Q9UPM6 363 aa9.34□□□□□ -0.91
ATXN3-232ENST00000555381 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
ATXN3-232ENST00000555381 CHGAP10645 457 aaKnown RBP9.33□□□□□ -0.92
ATXN3-232ENST00000555381 TMC2Q8TDI7 906 aa9.33□□□□□ -0.92
ATXN3-232ENST00000555381 HCSTQ9UBK5 93 aa9.33□□□□□ -0.92
ATXN3-232ENST00000555381 PBX2P40425 430 aa9.32□□□□□ -0.92
ATXN3-232ENST00000555381 CEP164Q9UPV0 1460 aa9.3□□□□□ -0.92
ATXN3-232ENST00000555381 PCDHGA4Q9Y5G9 962 aa9.3□□□□□ -0.92
ATXN3-232ENST00000555381 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
ATXN3-232ENST00000555381 SLC34A2O95436 690 aa9.28□□□□□ -0.92
ATXN3-232ENST00000555381 PPP1R37O75864 691 aa9.27□□□□□ -0.93
ATXN3-232ENST00000555381 ADGRD1Q6QNK2 874 aa9.27□□□□□ -0.93
ATXN3-232ENST00000555381 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
ATXN3-232ENST00000555381 NKX1-1Q15270 411 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-232ENST00000555381 CFTRP13569 1480 aa9.25□□□□□ -0.93
ATXN3-232ENST00000555381 ARHGAP33O14559 1287 aa9.22□□□□□ -0.93
ATXN3-232ENST00000555381 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
ATXN3-232ENST00000555381 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
ATXN3-232ENST00000555381 PSEN2P49810 448 aa9.2□□□□□ -0.94
ATXN3-232ENST00000555381 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
ATXN3-232ENST00000555381 PSDA5PKW4 1024 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-232ENST00000555381 HRO43593 1189 aa9.18□□□□□ -0.94
ATXN3-232ENST00000555381 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
ATXN3-232ENST00000555381 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
ATXN3-232ENST00000555381 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
ATXN3-232ENST00000555381 ARHGEF11O15085 1522 aa9.17□□□□□ -0.94
ATXN3-232ENST00000555381 BBXQ8WY36 941 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-232ENST00000555381 IFT140Q96RY7 1462 aa9.16□□□□□ -0.94
ATXN3-232ENST00000555381 RGS20O76081 388 aa9.16□□□□□ -0.94
ATXN3-232ENST00000555381 PLPP6Q8IY26 295 aa9.16□□□□□ -0.94
ATXN3-232ENST00000555381 PTCD2Q8WV60 388 aaKnown RBP9.16□□□□□ -0.94
ATXN3-232ENST00000555381 WIZO95785 1651 aa9.16□□□□□ -0.94
ATXN3-232ENST00000555381 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
ATXN3-232ENST00000555381 GTPBP6O43824 516 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-232ENST00000555381 FOXK1P85037 733 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms