RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 ARHGAP5Q13017 1502 aa16.03■□□□□ 0.16
HNRNPC-219ENST00000555309 CFAP74Q9C0B2 1584 aa16.03■□□□□ 0.16
HNRNPC-219ENST00000555309 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.16
HNRNPC-219ENST00000555309 POGZQ7Z3K3 1410 aa16■□□□□ 0.15
HNRNPC-219ENST00000555309 ARID4BQ4LE39 1312 aaPredicted RBP16■□□□□ 0.15
HNRNPC-219ENST00000555309 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
HNRNPC-219ENST00000555309 SIGLEC1Q9BZZ2 1709 aa15.99■□□□□ 0.15
HNRNPC-219ENST00000555309 ZNF777Q9ULD5 760 aaPredicted RBP15.99■□□□□ 0.15
HNRNPC-219ENST00000555309 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
HNRNPC-219ENST00000555309 PREX2Q70Z35 1606 aa15.97■□□□□ 0.15
HNRNPC-219ENST00000555309 MTUS2Q5JR59 1369 aa15.97■□□□□ 0.15
HNRNPC-219ENST00000555309 ZMYM4Q5VZL5 1548 aa15.97■□□□□ 0.15
HNRNPC-219ENST00000555309 ARHGEF40Q8TER5 1519 aa15.97■□□□□ 0.15
HNRNPC-219ENST00000555309 GPATCH8Q9UKJ3 1502 aaKnown RBP15.97■□□□□ 0.15
HNRNPC-219ENST00000555309 TRAPPC8Q9Y2L5 1435 aa15.96■□□□□ 0.15
HNRNPC-219ENST00000555309 ZFYVE16Q7Z3T8 1539 aa15.96■□□□□ 0.14
HNRNPC-219ENST00000555309 MLECQ14165 292 aa15.94■□□□□ 0.14
HNRNPC-219ENST00000555309 HNRNPMP52272 730 aaKnown RBP eCLIP15.94■□□□□ 0.145e-7■■■■□ 19.9
HNRNPC-219ENST00000555309 ZNF644Q9H582 1327 aaPredicted RBP15.93■□□□□ 0.14
HNRNPC-219ENST00000555309 ADAMTSL3P82987 1691 aa15.93■□□□□ 0.14
HNRNPC-219ENST00000555309 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
HNRNPC-219ENST00000555309 BCORL1Q5H9F3 1711 aa15.92■□□□□ 0.14
HNRNPC-219ENST00000555309 ABCC1P33527 1531 aa15.92■□□□□ 0.14
HNRNPC-219ENST00000555309 VPS8Q8N3P4 1428 aa15.92■□□□□ 0.14
HNRNPC-219ENST00000555309 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
HNRNPC-219ENST00000555309 CCNB3Q8WWL7 1395 aa15.91■□□□□ 0.14
HNRNPC-219ENST00000555309 CFDP1Q9UEE9 299 aaPredicted RBP15.91■□□□□ 0.14
HNRNPC-219ENST00000555309 SAMD9LQ8IVG5 1584 aa15.91■□□□□ 0.14
HNRNPC-219ENST00000555309 ZNF518AQ6AHZ1 1483 aa15.91■□□□□ 0.14
HNRNPC-219ENST00000555309 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
HNRNPC-219ENST00000555309 PLPPR3Q6T4P5 718 aa15.9■□□□□ 0.14
HNRNPC-219ENST00000555309 KDM5CP41229 1560 aa15.9■□□□□ 0.14
HNRNPC-219ENST00000555309 MADDQ8WXG6 1647 aa15.9■□□□□ 0.14
HNRNPC-219ENST00000555309 ATP10AO60312 1499 aa15.89■□□□□ 0.13
HNRNPC-219ENST00000555309 PTPRMP28827 1452 aa15.88■□□□□ 0.13
HNRNPC-219ENST00000555309 ITSN2Q9NZM3 1697 aa15.88■□□□□ 0.13
HNRNPC-219ENST00000555309 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
HNRNPC-219ENST00000555309 TIAM1Q13009 1591 aa15.88■□□□□ 0.13
HNRNPC-219ENST00000555309 SYCP2Q9BX26 1530 aa15.88■□□□□ 0.13
HNRNPC-219ENST00000555309 C9orf84Q5VXU9 1444 aa15.85■□□□□ 0.13
HNRNPC-219ENST00000555309 NCOA2Q15596 1464 aa15.85■□□□□ 0.13
HNRNPC-219ENST00000555309 DIP2CQ9Y2E4 1556 aa15.85■□□□□ 0.13
HNRNPC-219ENST00000555309 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
HNRNPC-219ENST00000555309 MLH3Q9UHC1 1453 aa15.85■□□□□ 0.13
HNRNPC-219ENST00000555309 HECW2Q9P2P5 1572 aa15.84■□□□□ 0.13
HNRNPC-219ENST00000555309 RIMS1Q86UR5 1692 aaKnown RBP15.84■□□□□ 0.13
HNRNPC-219ENST00000555309 KIDINS220Q9ULH0 1771 aa15.83■□□□□ 0.12
HNRNPC-219ENST00000555309 LRRC9Q6ZRR7 1453 aa15.83■□□□□ 0.12
HNRNPC-219ENST00000555309 SPAG9O60271 1321 aaKnown RBP15.81■□□□□ 0.12
HNRNPC-219ENST00000555309 CEBPAP49715 358 aaPredicted RBP15.8■□□□□ 0.12
HNRNPC-219ENST00000555309 KIAA1107Q9UPP5 1409 aa15.8■□□□□ 0.12
HNRNPC-219ENST00000555309 SUPT6HQ7KZ85 1726 aaKnown RBP15.79■□□□□ 0.12
HNRNPC-219ENST00000555309 MBD5Q9P267 1494 aa15.79■□□□□ 0.12
HNRNPC-219ENST00000555309 PLEKHH2Q8IVE3 1493 aa15.77■□□□□ 0.11
HNRNPC-219ENST00000555309 FER1L4A9Z1Z3 1794 aa15.76■□□□□ 0.11
HNRNPC-219ENST00000555309 CAMSAP2Q08AD1 1489 aa15.75■□□□□ 0.11
HNRNPC-219ENST00000555309 ATP7AQ04656 1500 aa15.75■□□□□ 0.11
HNRNPC-219ENST00000555309 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
HNRNPC-219ENST00000555309 REREQ9P2R6 1566 aa15.74■□□□□ 0.11
HNRNPC-219ENST00000555309 INO80Q9ULG1 1556 aaPredicted RBP15.74■□□□□ 0.11
HNRNPC-219ENST00000555309 HSPA2P54652 639 aa15.73■□□□□ 0.11
HNRNPC-219ENST00000555309 AGLP35573 1532 aa15.71■□□□□ 0.11
HNRNPC-219ENST00000555309 LMTK3Q96Q04 1460 aa15.71■□□□□ 0.11
HNRNPC-219ENST00000555309 APLP2Q06481 763 aa15.7■□□□□ 0.1
HNRNPC-219ENST00000555309 A2MP01023 1474 aa15.7■□□□□ 0.1
HNRNPC-219ENST00000555309 MYOM3Q5VTT5 1437 aa15.68■□□□□ 0.1
HNRNPC-219ENST00000555309 CCDC141Q6ZP82 1450 aa15.68■□□□□ 0.1
HNRNPC-219ENST00000555309 GGT6Q6P531 493 aa15.68■□□□□ 0.1
HNRNPC-219ENST00000555309 PLXNC1O60486 1568 aa15.66■□□□□ 0.1
HNRNPC-219ENST00000555309 RTEL1-TNFRSF6BF6WH68 1400 aa15.65■□□□□ 0.1
HNRNPC-219ENST00000555309 PPARGC1BQ86YN6 1023 aaKnown RBP15.64■□□□□ 0.09
HNRNPC-219ENST00000555309 ESF1Q9H501 851 aaKnown RBP15.64■□□□□ 0.09
HNRNPC-219ENST00000555309 C3P01024 1663 aa15.64■□□□□ 0.09
HNRNPC-219ENST00000555309 DHX29Q7Z478 1369 aaKnown RBP15.63■□□□□ 0.09
HNRNPC-219ENST00000555309 ADGBQ8N7X0 1667 aa15.63■□□□□ 0.09
HNRNPC-219ENST00000555309 ARHGEF5Q12774 1597 aa15.63■□□□□ 0.09
HNRNPC-219ENST00000555309 MIA2Q96PC5 1412 aa15.63■□□□□ 0.09
HNRNPC-219ENST00000555309 TSPY4P0CV99 314 aa15.63■□□□□ 0.09
HNRNPC-219ENST00000555309 TSPY10P0CW01 314 aa15.63■□□□□ 0.09
HNRNPC-219ENST00000555309 RSPH4AQ5TD94 716 aa15.63■□□□□ 0.09
HNRNPC-219ENST00000555309 KIF3BO15066 747 aa15.62■□□□□ 0.09
HNRNPC-219ENST00000555309 ZMYM3Q14202 1370 aa15.61■□□□□ 0.09
HNRNPC-219ENST00000555309 CLTCQ00610 1675 aaKnown RBP15.59■□□□□ 0.09
HNRNPC-219ENST00000555309 ABCC5O15440 1437 aa15.58■□□□□ 0.08
HNRNPC-219ENST00000555309 FGD6Q6ZV73 1430 aa15.58■□□□□ 0.08
HNRNPC-219ENST00000555309 PTPN23Q9H3S7 1636 aa15.58■□□□□ 0.08
HNRNPC-219ENST00000555309 CNTLNQ9NXG0 1405 aa15.57■□□□□ 0.08
HNRNPC-219ENST00000555309 CHIC2Q9UKJ5 165 aa15.56■□□□□ 0.08
HNRNPC-219ENST00000555309 PREX1Q8TCU6 1659 aa15.56■□□□□ 0.08
HNRNPC-219ENST00000555309 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
HNRNPC-219ENST00000555309 MAST1Q9Y2H9 1570 aa15.55■□□□□ 0.08
HNRNPC-219ENST00000555309 FBXO31Q5XUX0 539 aaPredicted RBP15.54■□□□□ 0.08
HNRNPC-219ENST00000555309 UHRF1BP1Q6BDS2 1440 aa15.54■□□□□ 0.08
HNRNPC-219ENST00000555309 SETD1BQ9UPS6 1966 aaKnown RBP15.54■□□□□ 0.08
HNRNPC-219ENST00000555309 TCOF1Q13428 1488 aaKnown RBP15.53■□□□□ 0.08
HNRNPC-219ENST00000555309 FAM50AQ14320 339 aaKnown RBP15.53■□□□□ 0.08
HNRNPC-219ENST00000555309 DAPK1P53355 1430 aa15.53■□□□□ 0.08
HNRNPC-219ENST00000555309 MROH2AA6NES4 1674 aa15.52■□□□□ 0.08
HNRNPC-219ENST00000555309 PTPRKQ15262 1439 aa15.52■□□□□ 0.08
HNRNPC-219ENST00000555309 WASHC2CQ9Y4E1 1318 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms